DY270411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: AG_BRANA (Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 8.147e-30 Identity = 69/151 (45.70%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 105 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYS +S ++ +ERY++ ++ + E N + E +KL+ ++ +Q + + MGE + +S KEL+++E ++D + IRS+KN+L+ I Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS-VKGTIERYKK-AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLDRSVNRIRSKKNELLFAEI 166
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS3_ORYSJ (MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica GN=MADS3 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.390e-29 Identity = 69/153 (45.10%), Postives = 110/153 (71.90%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQR-NQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EY+ +S ++ +ERY++ ++ E N ++ E SKL+ ++ LQ N + +G+ + +SL++L+ VE +++ G+ IR+RKN+L+ + Sbjct: 1 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNS-VKSTVERYKK-ANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLRDLKQVENRLEKGIAKIRARKNELLYAEV 151
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD58_ORYSJ (MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica GN=MADS58 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.390e-29 Identity = 70/150 (46.67%), Postives = 108/150 (72.00%), Query Frame = 3 Query: 108 RGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNG-NWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 RG++++KRIEN NRQVTF KRRSGLLKKA+E+SVLCDAEVAL+VFS++G+L+EYS +S E I ERY++ ++ + E N ++ E +KLK ++ LQ + + +G+++ ++ +EL+ +E ++D GL IR+RKN+L+ I Sbjct: 45 RGKIEIKRIENTTNRQVTFCKRRSGLLKKAYELSVLCDAEVALVVFSSRGRLYEYSNNSVKETI-ERYKK-ANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHRELKQLEGRLDKGLGKIRARKNELLCAEI 192
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: AG_ARATH (Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1 SV=2) HSP 1 Score: 130.568 bits (327), Expect = 1.815e-29 Identity = 68/151 (45.03%), Postives = 108/151 (71.52%), Query Frame = 3 Query: 105 GRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGN-WTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 GRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEVALIVFS++G+L+EYS +S ++ +ERY++ ++ + E N + E +KL+ ++ +Q + + MGE + +S KEL+++E +++ + IRS+KN+L+ I Sbjct: 18 GRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYSNNS-VKGTIERYKK-AISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKELRNLEGRLERSITRIRSKKNELLFSEI 166
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 4.044e-29 Identity = 63/152 (41.45%), Postives = 103/152 (67.76%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSC-MERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++++KRIEN NRQVTFSKRR GLLKKA+E++VLCDA V +++FS+ GK+FEY + +C + ++E Y+ EI + +E ++++ ME L + F G+DL++L+L ++ +EQQ++ + +R+RK+QL+ Q + Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQ----TVTNTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLEQQLEFSVTKVRARKHQLLNQQL 148
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: FBP24_PETHY (MADS-box protein FBP24 OS=Petunia hybrida GN=FBP24 PE=1 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 6.897e-29 Identity = 69/155 (44.52%), Postives = 105/155 (67.74%), Query Frame = 3 Query: 93 IVNMGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 ++ MGRG++++KRIENK +RQVTFSKRR+GLLKK HE+SVLCDA++ LI+FS+KGKLFEY S M +I+ RY + A ++ N ++ E +K++ LQ + + + G+DL+ +EL +E+Q++ L IR+RK +LM Q + Sbjct: 1 MIIMGRGKIEVKRIENKTSRQVTFSKRRAGLLKKTHELSVLCDAQIGLIIFSSKGKLFEYCSQPHSMSQIISRYLQTTGASLPVEDNRVQLYD----EVAKMRRDTLNLQLSLQRYKGDDLSLAQYEELNELEKQLEHALNKIRARKLELMQQQM 151
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: SOC1_ARATH (MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 9.008e-29 Identity = 67/151 (44.37%), Postives = 103/151 (68.21%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 M RG+ Q+KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEV+LI+FS KGKL+E+++ S M+ ++RY R+ + E + E + + ++E L+ +++ +GE + S++ELQ +EQQ++ +K IR+RK Q+ + I Sbjct: 1 MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS-SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEELQQIEQQLEKSVKCIRARKTQVFKEQI 150
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD25_ORYSJ (MADS-box transcription factor 25 OS=Oryza sativa subsp. japonica GN=MADS25 PE=2 SV=2) HSP 1 Score: 128.257 bits (321), Expect = 9.008e-29 Identity = 62/151 (41.06%), Postives = 105/151 (69.54%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++ +KRI+N +NRQVTFSKRR GL+KKA E+++LCDA+V LIVFS G+L+++S+ S M+ I+ERY+ E N + W E + L+ +++ L N + +GE++++ ++++LQ ++ Q++ L IR++K+QL+ + I Sbjct: 1 MGRGKIAIKRIDNTMNRQVTFSKRRGGLMKKARELAILCDADVGLIVFSCTGRLYDFSSSS-MKSIIERYQE-AGEEHCRLLNPMSEAKFWQREVTTLRQQVQNLHHNNRQLLGEEISNFTVRDLQLLQNQVEMSLHSIRNKKDQLLAEEI 149
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD57_ORYSJ (MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica GN=MADS57 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.537e-28 Identity = 65/151 (43.05%), Postives = 102/151 (67.55%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++ ++RI+N +RQVTFSKRR+GLLKKA E+S+LCDAEV L+VFS+ G+L+E+S+ + M+ +++RY E L N W E + L+ ++ LQ + K MGE+L+ L +++LQ +E +++ L+ IR RK+ L+ I Sbjct: 1 MGRGKIVIRRIDNSTSRQVTFSKRRNGLLKKAKELSILCDAEVGLVVFSSTGRLYEFSSTN-MKTVIDRYTN--AKEELLGGNATSEIKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRDLQGLENRLEISLRNIRMRKDNLLKSEI 148
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: DEF21_ANTMA (MADS-box protein defh21 OS=Antirrhinum majus GN=DEFH21 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 2.007e-28 Identity = 68/150 (45.33%), Postives = 100/150 (66.67%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDS-CMERILERY--ERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 542 MGRG++++KRIEN +RQVTFSKRRSGL+KK HE+SVLCDA++ LIVFSTKGKL EY T M++I++RY + E + +A N E +++K LQ N + + G+DL+ + +EL +E+ +D L +R+RK +L+ Sbjct: 1 MGRGKIEVKRIENNTSRQVTFSKRRSGLMKKTHELSVLCDAQIGLIVFSTKGKLTEYCTPPFSMKQIIDRYVKAKGILPEMENRAGPHADNDQVIKELTRMKEETLNLQLNLQRYKGDDLSTVRFEELTELEKLLDQSLNKVRARKLELL 150 The following BLAST results are available for this feature:
BLAST of DY270411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270411 ID=DY270411; Name=DY270411; organism=Citrus clementina; type=EST; length=1186bpback to top |