DY270411
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSJ (MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica GN=MADS56 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 5.839e-28 Identity = 66/154 (42.86%), Postives = 106/154 (68.83%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC--YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 M RGR +LKRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIVFS +G+L+E+++ +++ ++RY+ Y + + +I+ + TL +K ++E L +++ +GE+L S++EL+ +E +++ L IR +K +L+ Q I+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAK---KLEALDESRRKILGENLEGFSIEELRGLEMKLEKSLHKIRLKKTELLEQQIA 151
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 5.839e-28 Identity = 68/151 (45.03%), Postives = 102/151 (67.55%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRGRV+LK+IEN NRQVTFSKRR GLLKKA+E+++LCDA++ +IVFS GK++EYS+ RI ++RY A + E++ E +++K L+ + +MG+DLA L+L+++ ++EQQI+ L +R RK QL+ Q + Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPW--RIANIFDRYLKAP-STRFEEMDVQQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLEQQIEFSLYKVRLRKQQLLDQQL 148
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 5.839e-28 Identity = 73/151 (48.34%), Postives = 98/151 (64.90%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++++KRIEN +RQVTFSKRRSGLLKKA E+SVLCDAEVA+IVFS GKLFEYS+ M++ L RY + + A++ E + E LK ++ LQ G+ L L+ KELQS+EQQ+ L +R RK +L+ + Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTG-MKQTLSRYGNH----QSSSASKAEED---CAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLEQQLYHALITVRERKERLLTNQL 143
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD56_ORYSI (MADS-box transcription factor 56 OS=Oryza sativa subsp. indica GN=MADS56 PE=2 SV=2) HSP 1 Score: 123.25 bits (308), Expect = 2.898e-27 Identity = 65/154 (42.21%), Postives = 106/154 (68.83%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC--YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSIS 557 M RGR +LKRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALIVFS +G+L+E+++ +++ ++RY+ Y + + +I+ + TL +K ++E L +++ +GE+L S++EL+ +E +++ L IR +K +L+ + I+ Sbjct: 1 MVRGRTELKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASAPSLQKTIDRYKAYTKDHVNNKTIQQDIQQVKDDTLGLAK---KLEALDESRRKILGENLEGCSIEELRGLEMKLEKSLHNIRLKKTELLERQIA 151
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MAD23_ORYSJ (MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica GN=MADS23 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.785e-27 Identity = 63/151 (41.72%), Postives = 100/151 (66.23%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 MGRG++++KRI+N +RQVTFSKRRSGL KKA E+S+LCDAEV L+VFS+ +L+++++ S M+ I+ERY Q N W E + L+ ++ LQ + +G+ L+ L +++LQ++E +++ LK IR RK+ +M+ I Sbjct: 1 MGRGKIEIKRIDNATSRQVTFSKRRSGLFKKARELSILCDAEVGLLVFSSTSRLYDFASSS-MKSIIERYNETKEDPHQTM-NASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDVEDLQNLESKLEMSLKNIRLRKDNVMMDQI 149
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: AGL14_ARATH (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana GN=AGL14 PE=2 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 3.785e-27 Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSK-----LKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 542 M RG+ ++KRIEN +RQVTFSKRR+GLLKKA E+SVLCDAEVALI+FS +GKL+E+S+ S + + +ERY ++++Q N + SK L ++E L+ + + MGE L S++ELQ +E Q+D L IR++K QL+ Sbjct: 1 MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSSSSIPKTVERY------QKRIQDLGSNHKRNDNSQQSKDETYGLARKIEHLEISTRKMMGEGLDASSIEELQQLENQLDRSLMKIRAKKYQLL 146
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: AGL12_ARATH (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana GN=AGL12 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 1.101e-26 Identity = 67/162 (41.36%), Postives = 101/162 (62.35%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYC-----------YAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLMLQSI 554 M RG++QLKRIEN ++RQVTF KRR+GLLKKA E+SVLCDAE+ +++FS +GKLFE +T ME ++++Y + A+ QLQ ++P E + LK +E+LQ+ + G ++L+EL +E+ ++ + IRS K +MLQ I Sbjct: 1 MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATKGTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKD----EINVLKQEIEMLQKGISYMFGGGDGAMNLEELLLLEKHLEYWISQIRSAKMDVMLQEI 158
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: MADS2_ORYSJ (MADS-box transcription factor 2 OS=Oryza sativa subsp. japonica GN=MADS2 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 1.438e-26 Identity = 65/140 (46.43%), Postives = 94/140 (67.14%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEY-STDSCMERILERYERYCYAERQLQANEI---EPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGL 509 MGRG++++KRIEN NRQVTFSKRRSG+LKKA EISVLCDAEV +++FS+ GKL++Y S + + RILE+Y Q + +I E + + + E ++K + +Q +H GEDL L KEL +E+ +D+G+ Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRSGILKKAREISVLCDAEVGVVIFSSAGKLYDYCSPKTSLSRILEKY--------QTNSGKILWDEKHKSLSAEIDRIKKENDNMQIELRHLKGEDLNSLQPKELIMIEEALDNGI 132
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: GLOB_TOBAC (Floral homeotic protein GLOBOSA OS=Nicotiana tabacum GN=GLO PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.878e-26 Identity = 65/147 (44.22%), Postives = 102/147 (69.39%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 542 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R+L + E N E +K+K + +Q +H GED+ L+ +EL +E +D+GL IR+++N L+ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHK--LTGRRLWDAKHE---NLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMMLEDALDNGLTSIRNKQNDLL 141
BLAST of DY270411 vs. ExPASy Swiss-Prot
Match: FBP1_PETHY (Floral homeotic protein FBP1 OS=Petunia hybrida GN=FBP1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 3.204e-26 Identity = 63/147 (42.86%), Postives = 102/147 (69.39%), Query Frame = 3 Query: 102 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYSTDSCMERILERYERYCYAERQLQANEIEPNGNWTLEYSKLKARMEVLQRNQKHFMGEDLADLSLKELQSVEQQIDSGLKLIRSRKNQLM 542 MGRG++++KRIEN NRQVT+SKRR+G+LKKA EISVLCDA V++I+F++ GK+ E+S+ S ++ IL++Y + R L A + N E +K+K + +Q +H GED+ L+ +EL +E +++GL IR+++N+++ Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGILKKAKEISVLCDARVSVIIFASSGKMHEFSSTSLVD-ILDQYHKLT-GRRLLDAK----HENLDNEINKVKKDNDNMQIELRHLKGEDITSLNHRELMILEDALENGLTSIRNKQNEVL 141 The following BLAST results are available for this feature:
BLAST of DY270411 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 119
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270411 ID=DY270411; Name=DY270411; organism=Citrus clementina; type=EST; length=1186bpback to top |