DY270414

Overview
NameDY270414
Unique NameDY270414
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1316
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFA5_ARATH (Heat stress transcription factor A-5 OS=Arabidopsis thaliana GN=HSFA5 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.881e-46
Identity = 89/184 (48.37%), Postives = 125/184 (67.93%), Query Frame = 3
Query:  123 SQGQGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKP 674
            S G+G+   PAPFL+KTYEMVDD  T+ +VSWS +  SFIVWN  +F++ LLP YFKHNNFSSF+RQLNTYGFRKIDP++WEF N++FI+ Q+HLLKNIHRRKP+HSHS   P   T+ ER   + ++++L +E +                ++  + + E +  +ENRQ +++  L   ++ P
Sbjct:   13 SGGEGAGG-PAPFLVKTYEMVDDSSTDQIVSWSANNNSFIVWNHAEFSRLLLPTYFKHNNFSSFIRQLNTYGFRKIDPERWEFLNDDFIKDQKHLLKNIHRRKPIHSHS-HPPASSTDQERAVLQEQMDKLSREKAAIEAKLLKFKQQKVVAKHQFEEMTEHVDDMENRQKKLLNFLETAIRNP 194          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 4.191e-46
Identity = 90/185 (48.65%), Postives = 120/185 (64.86%), Query Frame = 3
Query:  144 NSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPT-------PLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPG 677
            +S  PFL KTY+MVDDPLT+ +VSWS    SF+VWN P+FAK  LP+YFKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQ+ +LK+I RRKP      Q P           E  +   E ++ERL+++ +                E+H+Q+V +++  +E RQ QM+  LA  ++ PG
Sbjct:   19 SSIPPFLSKTYDMVDDPLTDDVVSWSSGNNSFVVWNVPEFAKQFLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQILKSIVRRKPAQVQPPQQPQVQHSSVGACVEVGKFGLEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVHVMEQRQQQMMSFLAKAVQSPG 203          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA2C_ORYSJ (Heat stress transcription factor A-2c OS=Oryza sativa subsp. japonica GN=HSFA2C PE=2 SV=2)

HSP 1 Score: 184.882 bits (468), Expect = 9.338e-46
Identity = 94/190 (49.47%), Postives = 123/190 (64.74%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHS---HSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPGIFLGS*SNKQK 710
            P PFL KTY++V+DP T+ +VSWS++G SF+VW+P  FA  LLP+ FKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQRHLLK I RRKP  +      QS T   E     FE +I+RLK++ +                + HV+++ +RLR  E +Q QM+  LA  ++ P  F      K+K
Sbjct:   40 PPPFLTKTYDLVEDPATDGVVSWSRAGNSFVVWDPHVFADLLLPRLFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKTIKRRKPPSNAPPSQQQSLTSCLEVGEFGFEEEIDRLKRDKNILITEVVKLRQEQQATKDHVKAMEDRLRAAEQKQVQMMGFLARAMRNPEFFQQLAQQKEK 229          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA2B_ORYSJ (Heat stress transcription factor A-2b OS=Oryza sativa subsp. japonica GN=HSFA2B PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 7.905e-45
Identity = 92/178 (51.69%), Postives = 121/178 (67.98%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHST---QSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKP 674
            P PFL KTY+MVDD  T++ VSWS +  SF+VW+P  FA  LLP++FKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQRHLLKNI RRKP  SH+    QS  P  E     ++A+I+RLK++                  + +++++ +RL+  E RQ QM+  LA ++K P
Sbjct:   50 PPPFLTKTYDMVDDAGTDAAVSWSATSNSFVVWDPHAFATVLLPRFFKHNNFSSFVRQLNTYGFRKVDPDRWEFANENFLRGQRHLLKNIKRRKP-PSHTASNQQSLGPYLEVGHFGYDAEIDRLKRDKQLLMAEVVKLRQEQQNTKANLKAMEDRLQGTEQRQQQMMAFLARVMKNP 226          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA1A_ARATH (Heat stress transcription factor A-1a OS=Arabidopsis thaliana GN=HSFA1A PE=1 SV=2)

HSP 1 Score: 181.415 bits (459), Expect = 1.032e-44
Identity = 92/207 (44.44%), Postives = 128/207 (61.84%), Query Frame = 3
Query:  138 SSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP-----------------LTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPGIFLGS*SNKQ 707
            +++ P PFL KTY+MV+DP T+++VSWS +  SFIVW+PP+F++DLLP+YFKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQ+HLLK I RRK V  H + S  P                   E  +   E ++E+LK++ +                +  +Q + + L+ +E RQ Q++  LA  ++ P  FL     KQ
Sbjct:   46 ANSLPPPFLSKTYDMVEDPATDAIVSWSPTNNSFIVWDPPEFSRDLLPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKKISRRKSVQGHGSSSSNPQSQQLSQGQGSMAALSSCVEVGKFGLEEEVEQLKRDKNVLMQELVKLRQQQQTTDNKLQVLVKHLQVMEQRQQQIMSFLAKAVQNP-TFLSQFIQKQ 251          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA2E_ORYSJ (Heat stress transcription factor A-2e OS=Oryza sativa subsp. japonica GN=HSFA2E PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.648e-42
Identity = 85/180 (47.22%), Postives = 118/180 (65.56%), Query Frame = 3
Query:  138 SSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSH-STQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKP 674
            +   P PFL KTY+MVDDP T+++VSWS +  SF+VW+P  F   LLP+YFKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQ+HLLK+I RRKP +S  S QS     E     +E +I++LK++                  +  +Q++ ++L+  E +Q  M+  L+ ++  P
Sbjct:   32 ADGGPPPFLTKTYDMVDDPTTDAVVSWSATNNSFVVWDPHLFGNVLLPRYFKHNNFSSFVRQLNTYGFRKVDPDKWEFANEGFLRGQKHLLKSIKRRKPPNSSPSQQSLGSFLEVGHFGYEGEIDQLKRDKHLLMAEVVKLRQEQQNTKSDLQAMEQKLQGTEQKQQHMMAFLSRVMHNP 211          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFA3_ARATH (Heat stress transcription factor A-3 OS=Arabidopsis thaliana GN=HSFA3 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 3.672e-42
Identity = 86/179 (48.04%), Postives = 117/179 (65.36%), Query Frame = 3
Query:  144 NSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHST-QSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPG 677
            N   PFL KT+++VDDP  + ++SW  +G SF+VW+P +FA+ +LP+ FKHNNFSSFVRQLNTYGFRKID D+WEFANE F+RG++HLLKNIHRR+   S+ T  S T  ++    E   +IE+L+KE              +     HV +V +RL+  E RQ Q++  LA L +  G
Sbjct:   51 NPIPPFLSKTFDLVDDPTLDPVISWGLTGASFVVWDPLEFARIILPRNFKHNNFSSFVRQLNTYGFRKIDTDKWEFANEAFLRGKKHLLKNIHRRRSPQSNQTCCSSTSQSQGSPTEVGGEIEKLRKERRALMEEMVELQQQSRGTARHVDTVNQRLKAAEQRQKQLLSFLAKLFQNRG 229          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFA2_ARATH (Heat stress transcription factor A-2 OS=Arabidopsis thaliana GN=HSFA2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 8.180e-42
Identity = 85/182 (46.70%), Postives = 115/182 (63.19%), Query Frame = 3
Query:  138 SSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPV---HSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKP 674
            +   P PFL KTYEMV+DP T+++VSWS    SF+VW+   F+  LLP+YFKH+NFSSF+RQLNTYGFRKIDPD+WEFANE F+ GQ+HLLKNI RR+ +   + +   S     E  +  F+ ++ERLK+++              H  +  V ++ +RL   E RQ QM+  LA  L  P
Sbjct:   38 NETGPPPFLTKTYEMVEDPATDTVVSWSNGRNSFVVWDSHKFSTTLLPRYFKHSNFSSFIRQLNTYGFRKIDPDRWEFANEGFLAGQKHLLKNIKRRRNMGLQNVNQQGSGMSCVEVGQYGFDGEVERLKRDHGVLVAEVVRLRQQQHSSKSQVAAMEQRLLVTEKRQQQMMTFLAKALNNP 219          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA2D_ORYSJ (Heat stress transcription factor A-2d OS=Oryza sativa subsp. japonica GN=HSFA2D PE=2 SV=2)

HSP 1 Score: 170.244 bits (430), Expect = 2.380e-41
Identity = 83/180 (46.11%), Postives = 119/180 (66.11%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVH--SHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPGIF 683
            P PFL KT+++V DP T+ +VSW ++G SF+VW+P  FA   LP++FKHNNFSSFVRQLNTYGFRKIDPD+WEFAN+ F+RGQRHLLK I RR+P+     S Q+     E  +   + +I+RLK++ +                + +++++ ERL++ E +Q QM+  LA  ++ P  F
Sbjct:   35 PPPFLTKTFDLVADPATDGVVSWGRAGSSFVVWDPHVFAAVFLPRFFKHNNFSSFVRQLNTYGFRKIDPDRWEFANDGFLRGQRHLLKMIKRRRPLSYLPGSQQALGTCLEVGQFGLDEEIDRLKRDKNILLAEVVKLRHKQQSTKANMRAMEERLQHAEQKQVQMMGFLARAMQNPDFF 214          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFC1_ARATH (Heat stress transcription factor C-1 OS=Arabidopsis thaliana GN=HSFC1 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 4.489e-40
Identity = 86/188 (45.74%), Postives = 115/188 (61.17%), Query Frame = 3
Query:  117 DESQGQGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPGI 680
            D S    ++N  APF++KTY+MV+DP T+ L++W  +  SFIV +P DF++ +LP YFKHNNFSSFVRQLNTYGFRK+DPD+WEFANE F+RGQ+HLL NI RRK       Q      + E  E   +IERLK+E                E E  +Q +  R+   E R  QM+  L  +++ P +
Sbjct:    4 DNSNNNNNNNVIAPFIVKTYQMVNDPSTDWLITWGPAHNSFIVVDPLDFSQRILPAYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEHFLRGQKHLLNNIARRKHARGMYGQ------DLEDGEIVREIERLKEE--------------QRELEAEIQRMNRRIEATEKRPEQMMAFLYKVVEDPDL 171          
The following BLAST results are available for this feature:
BLAST of DY270414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HSFA5_ARATH1.881e-4648.37Heat stress transcription factor A-5 OS=Arabidopsi... [more]
HFA1E_ARATH4.191e-4648.65Heat stress transcription factor A-1e OS=Arabidops... [more]
HFA2C_ORYSJ9.338e-4649.47Heat stress transcription factor A-2c OS=Oryza sat... [more]
HFA2B_ORYSJ7.905e-4551.69Heat stress transcription factor A-2b OS=Oryza sat... [more]
HFA1A_ARATH1.032e-4444.44Heat stress transcription factor A-1a OS=Arabidops... [more]
HFA2E_ORYSJ1.648e-4247.22Heat stress transcription factor A-2e OS=Oryza sat... [more]
HSFA3_ARATH3.672e-4248.04Heat stress transcription factor A-3 OS=Arabidopsi... [more]
HSFA2_ARATH8.180e-4246.70Heat stress transcription factor A-2 OS=Arabidopsi... [more]
HFA2D_ORYSJ2.380e-4146.11Heat stress transcription factor A-2d OS=Oryza sat... [more]
HSFC1_ARATH4.489e-4045.74Heat stress transcription factor C-1 OS=Arabidopsi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YI16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270414 ID=DY270414; Name=DY270414; organism=Citrus clementina; type=EST; length=1316bp
CTTTGGTTTTCTTGTCGCAGCTTAGCTTTGTGCTGTAAAAGTTGTCAATA
TTGGACTGTTTGTATATGTAGGCTCTTGAAAGTTTAATAAATTTTCTTTC
GTAGAATTTAGTAATGGATGAATCACAGGGACAGGGTAGTTCAAATTCGC
CGGCACCTTTTCTCATCAAGACATATGAGATGGTGGATGATCCATTAACC
AACTCATTGGTGTCTTGGAGTCAAAGTGGCGGTAGTTTCATTGTCTGGAA
TCCCCCGGATTTTGCTAAAGATTTGCTGCCTCAGTACTTCAAGCACAATA
ATTTCTCCAGTTTTGTGAGGCAGCTGAATACATATGGATTCAGGAAGATT
GATCCTGATCAGTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAGAG
GCATCTCTTAAAGAACATTCACAGACGCAAGCCAGTTCACAGCCATTCCA
CGCAGTCTCCCACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGGCC
AAAATTGAGAGACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTGCG
GAGGCGTGAGGGTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGTAC
GCGAGCGTCTAAGGTACTTGGAAAATCGACAGACGCAAATGATCCCCTGT
TTAGCTAACCTGTTGAAAAAACCCGGGATTTTCCTCGGCTCCTAATCCAA
CAAGCAGAAGTTCACAGCAAAAAGAAAAAGCTGTTGAGGCCCTACGAATA
TTGAATAACTTTGATGGAGGTAAAATCCCCAGCCCTAAATTGTGAATGAA
AAGAAAAAAAAACCCCAAAAGCTAACTTCGAATCCACCCCCCGCGGTTGA
ATTTGAAAAAAATTGAACGGCCAAAATCCTCCGTGGAACTTTTGGGAACT
TTTTTTTGTACGGCCCTTGGGAAAGCTTTTTTATCCAACATGGATACTAA
TTTTCGAGAAATCACCACCCATCGCTCTGCGCCCCCCACAAAATACATAT
AAAAAACGGGGGGCCCAACTAAAAACAACTCAAAGAGTTTTTTTTATTGT
CTACTATCCCCCAAACCCCTTCGGTACGATCCCTTCACCCCCCCACCGCA
TCGAAATAACTACATACCAAAACAACACCCTGCGCGGGAAACCCTCAGCT
ATTCTCTCCATGCAATCATCAAAACAGCAATATACCTACATACAACAAAT
ATATATCAACCTATCTACTAATTAATTAATCGTTCATCCTAGCTGAGTGA
TGACCCATTCTCACTTAACATACGCCTTAATAACAACAATTGCCTGTGCC
AACCGATGAACACTAA
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