DY270414

Overview
NameDY270414
Unique NameDY270414
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1316
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana GN=HSFB2B PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 6.278e-34
Identity = 62/101 (61.39%), Postives = 83/101 (82.18%), Query Frame = 3
Query:  129 GQGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRK 431
            G    + P PFL KTY++V+DP+ + L+SW++ G +FIVW P +FA+DLLP+YFKHNNFSSFVRQLNTYGFRK+ PD+WEF+N+ F RG++ LL++I RRK
Sbjct:   50 GDSQRSIPTPFLTKTYQLVEDPVYDELISWNEDGTTFIVWRPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFKRGEKILLRDIQRRK 150          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFB4A_ORYSJ (Putative heat stress transcription factor B-4a OS=Oryza sativa subsp. japonica GN=HSFB4A PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.071e-33
Identity = 66/111 (59.46%), Postives = 83/111 (74.77%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWS-----QSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTP 467
            PAPFL KTY++VDDP T+ +VSW      +S  SF+VW PP+FA+D+LP YFKH+NFSSFVRQLNTYGFRK+ P++WEFANE F +G++ LL  IHRRK   +     P P
Sbjct:   23 PAPFLTKTYQLVDDPATDHVVSWEDDDGGESASSFVVWRPPEFARDILPNYFKHSNFSSFVRQLNTYGFRKVVPERWEFANEFFRKGEKQLLCEIHRRKSAAATWPPFPPP 133          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFA6B_ORYSJ (Heat stress transcription factor A-6a OS=Oryza sativa subsp. japonica GN=HSFA6B PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.399e-33
Identity = 80/188 (42.55%), Postives = 113/188 (60.11%), Query Frame = 3
Query:  126 QGQGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQ--SGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR---KPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKP 674
            +G G +  PAPF+ KTYEMV D  T+++VSW    SG SF+VW+P   A  +LP++FKH NFSSFVRQLNTYGFRK+ PD+WEFANE F+ GQ+HLLKNI RR   KP+     ++   +    + E   ++  LK++ +             +  +  + ++ E +R +E RQ Q I   A +L  P
Sbjct:   84 EGLGEAG-PAPFVAKTYEMVADAATDAVVSWGPGGSGASFVVWDPHALAAGVLPRFFKHANFSSFVRQLNTYGFRKVTPDRWEFANEAFLAGQKHLLKNIKRRRVSKPLVDSQLRNKASVV-FGQPEAPGEVVSLKRDRAALRAEVIMLKQQYNACKSQLIAMEEMVRNIERRQQQTIGFFAKVLTNP 269          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFB1_ARATH (Heat stress transcription factor B-1 OS=Arabidopsis thaliana GN=HSFB1 PE=2 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 9.065e-33
Identity = 64/96 (66.67%), Postives = 77/96 (80.21%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPV 437
            PAPFL KTY++VDD  T+ +VSW++ G +F+VW   +FAKDLLPQYFKHNNFSSF+RQLNTYGFRK  PD+WEFAN+ F RG   LL +I RRK V
Sbjct:   12 PAPFLSKTYQLVDDHSTDDVVSWNEEGTAFVVWKTAEFAKDLLPQYFKHNNFSSFIRQLNTYGFRKTVPDKWEFANDYFRRGGEDLLTDIRRRKSV 107          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFB3_ARATH (Heat stress transcription factor B-3 OS=Arabidopsis thaliana GN=HSFB3 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 1.002e-31
Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 3
Query:  150 PAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVH-SH--STQSPTPLTETERNEFEAKI 506
            P PFL+KTY++V+DP T+ ++SW++ G  F+VW P +FA+DLLP  FKH NFSSFVRQLNTYGFRK+   +WEF+NE F +GQR L+ NI RRK  H SH  S     P T     E   +I
Sbjct:   38 PPPFLVKTYKVVEDPTTDGVISWNEYGTGFVVWQPAEFARDLLPTLFKHCNFSSFVRQLNTYGFRKVTTIRWEFSNEMFRKGQRELMSNIRRRKSQHWSHNKSNHQVVPTTTMVNQEGHQRI 159          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HSFB1_ORYSJ (Heat stress transcription factor B-1 OS=Oryza sativa subsp. japonica GN=HSFB1 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 2.233e-31
Identity = 62/108 (57.41%), Postives = 79/108 (73.15%), Query Frame = 3
Query:  135 GSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQS 458
            G    PAPFL KT +MV++  T+ ++SW + G SF+VW P +FA+DLLP +FKH NFSSFVRQLNTYGFRK+ PD+WEFAN  F RG++ LL  I RRK     S++S
Sbjct:   23 GGGGGPAPFLTKTNQMVEESATDEVISWGKEGRSFVVWKPVEFARDLLPLHFKHCNFSSFVRQLNTYGFRKVVPDRWEFANGNFRRGEQGLLSGIRRRKATTPQSSKS 130          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFB2A_ORYSJ (Heat stress transcription factor B-2a OS=Oryza sativa subsp. japonica GN=HSFB2A PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 2.916e-31
Identity = 59/92 (64.13%), Postives = 76/92 (82.61%), Query Frame = 3
Query:  156 PFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRK 431
            PFL KTY MV+DP T+  +SW+ SG +F+VW P +FA+DLLP++FKH+NFSSFVRQLNTYGF+K+  D+WEFAN+ F RG++HLL  I RRK
Sbjct:   10 PFLTKTYAMVEDPSTDETISWNDSGTAFVVWRPAEFARDLLPKHFKHSNFSSFVRQLNTYGFKKVVADRWEFANDCFRRGEKHLLGGIQRRK 101          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFC2B_ORYSJ (Heat stress transcription factor C-2b OS=Oryza sativa subsp. japonica GN=HSFC2B PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.600e-29
Identity = 58/92 (63.04%), Postives = 74/92 (80.43%), Query Frame = 3
Query:  153 APFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRR 428
            APF+ KTY MV+DP T+ ++ W +   SF+V +P  F++ LLP +FKHNNFSSFVRQLNTYGFRK+DPD+WEFA+  F+RGQ HLL+NI RR
Sbjct:   10 APFVWKTYRMVEDPGTDGVIGWGKGNNSFVVADPFVFSQTLLPAHFKHNNFSSFVRQLNTYGFRKVDPDRWEFAHASFLRGQTHLLRNIVRR 101          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFC2A_ORYSJ (Heat stress transcription factor C-2a OS=Oryza sativa subsp. japonica GN=HSFC2A PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.600e-29
Identity = 70/176 (39.77%), Postives = 101/176 (57.39%), Query Frame = 3
Query:  153 APFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRKPVHSHSTQSPTPLTETERNEFEAKIERLKKENSXXXXXXXXXXGGNHEFEYHVQSVRERLRYLENRQTQMIPCLANLLKKPGI 680
            APF+ KTY MVDDP T+ +++W +   SF+V +P  F++ LLP +FKH+NFSSFVRQLNTYGFRK+DPD+WEFA+  F+RGQ HLL+ I RR      + +             EA    + +E++              E E  V ++  R++  E R  QM+  L  ++  P +
Sbjct:   13 APFVAKTYRMVDDPATDGVIAWGRDSNSFVVADPFAFSQTLLPAHFKHSNFSSFVRQLNTYGFRKVDPDRWEFAHVSFLRGQTHLLRRIVRRSSGGGGAKRKEE--AGGCGGGGEAAAGDVDEESAVVALEVARLRREQREIEGRVAAMWRRVQETERRPKQMLAFLVKVVGDPQV 186          
BLAST of DY270414 vs. ExPASy Swiss-Prot
Match: HFC1A_ORYSJ (Heat stress transcription factor C-1a OS=Oryza sativa subsp. japonica GN=HSFC1A PE=2 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 4.656e-29
Identity = 60/101 (59.41%), Postives = 74/101 (73.27%), Query Frame = 3
Query:  129 GQGSSNSPAPFLIKTYEMVDDPLTNSLVSWSQSGGSFIVWNPPDFAKDLLPQYFKHNNFSSFVRQLNTYGFRKIDPDQWEFANEEFIRGQRHLLKNIHRRK 431
            G       APF+ KTY+MV DP T++LV W +   SF+V +P  F++ LLP +FKH NFSSFVRQLNTYGFRK+ PD+WEFA+E F+RGQ HLL  I RRK
Sbjct:   17 GGDGQQQTAPFVAKTYQMVCDPRTDALVRWGRDNNSFVVVDPAAFSQLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRK 117          
The following BLAST results are available for this feature:
BLAST of DY270414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
HFB2B_ARATH6.278e-3461.39Heat stress transcription factor B-2b OS=Arabidops... [more]
HFB4A_ORYSJ1.071e-3359.46Putative heat stress transcription factor B-4a OS=... [more]
HFA6B_ORYSJ1.399e-3342.55Heat stress transcription factor A-6a OS=Oryza sat... [more]
HSFB1_ARATH9.065e-3366.67Heat stress transcription factor B-1 OS=Arabidopsi... [more]
HSFB3_ARATH1.002e-3154.10Heat stress transcription factor B-3 OS=Arabidopsi... [more]
HSFB1_ORYSJ2.233e-3157.41Heat stress transcription factor B-1 OS=Oryza sati... [more]
HFB2A_ORYSJ2.916e-3164.13Heat stress transcription factor B-2a OS=Oryza sat... [more]
HFC2B_ORYSJ1.600e-2963.04Heat stress transcription factor C-2b OS=Oryza sat... [more]
HFC2A_ORYSJ1.600e-2939.77Heat stress transcription factor C-2a OS=Oryza sat... [more]
HFC1A_ORYSJ4.656e-2959.41Heat stress transcription factor C-1a OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YI16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270414 ID=DY270414; Name=DY270414; organism=Citrus clementina; type=EST; length=1316bp
CTTTGGTTTTCTTGTCGCAGCTTAGCTTTGTGCTGTAAAAGTTGTCAATA
TTGGACTGTTTGTATATGTAGGCTCTTGAAAGTTTAATAAATTTTCTTTC
GTAGAATTTAGTAATGGATGAATCACAGGGACAGGGTAGTTCAAATTCGC
CGGCACCTTTTCTCATCAAGACATATGAGATGGTGGATGATCCATTAACC
AACTCATTGGTGTCTTGGAGTCAAAGTGGCGGTAGTTTCATTGTCTGGAA
TCCCCCGGATTTTGCTAAAGATTTGCTGCCTCAGTACTTCAAGCACAATA
ATTTCTCCAGTTTTGTGAGGCAGCTGAATACATATGGATTCAGGAAGATT
GATCCTGATCAGTGGGAGTTTGCAAATGAGGAATTCATACGAGGACAGAG
GCATCTCTTAAAGAACATTCACAGACGCAAGCCAGTTCACAGCCATTCCA
CGCAGTCTCCCACTCCACTAACCGAAACGGAAAGAAATGAATTCGAGGCC
AAAATTGAGAGACTCAAAAAGGAGAATAGCTTACTTCAATTAGAGCTGCG
GAGGCGTGAGGGTGGAAATCACGAGTTTGAGTATCATGTTCAATCAGTAC
GCGAGCGTCTAAGGTACTTGGAAAATCGACAGACGCAAATGATCCCCTGT
TTAGCTAACCTGTTGAAAAAACCCGGGATTTTCCTCGGCTCCTAATCCAA
CAAGCAGAAGTTCACAGCAAAAAGAAAAAGCTGTTGAGGCCCTACGAATA
TTGAATAACTTTGATGGAGGTAAAATCCCCAGCCCTAAATTGTGAATGAA
AAGAAAAAAAAACCCCAAAAGCTAACTTCGAATCCACCCCCCGCGGTTGA
ATTTGAAAAAAATTGAACGGCCAAAATCCTCCGTGGAACTTTTGGGAACT
TTTTTTTGTACGGCCCTTGGGAAAGCTTTTTTATCCAACATGGATACTAA
TTTTCGAGAAATCACCACCCATCGCTCTGCGCCCCCCACAAAATACATAT
AAAAAACGGGGGGCCCAACTAAAAACAACTCAAAGAGTTTTTTTTATTGT
CTACTATCCCCCAAACCCCTTCGGTACGATCCCTTCACCCCCCCACCGCA
TCGAAATAACTACATACCAAAACAACACCCTGCGCGGGAAACCCTCAGCT
ATTCTCTCCATGCAATCATCAAAACAGCAATATACCTACATACAACAAAT
ATATATCAACCTATCTACTAATTAATTAATCGTTCATCCTAGCTGAGTGA
TGACCCATTCTCACTTAACATACGCCTTAATAACAACAATTGCCTGTGCC
AACCGATGAACACTAA
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