DY270428
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: U2D2B_RAT (Ubiquitin-conjugating enzyme E2 D2B OS=Rattus norvegicus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.211e-18 Identity = 45/69 (65.22%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP DSPY G F +T F YPF+ K F Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEF 69
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: U2D2B_MOUSE (Ubiquitin-conjugating enzyme E2 D2B OS=Mus musculus GN=Ube2d2b PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 8.211e-18 Identity = 45/69 (65.22%), Postives = 48/69 (69.57%), Query Frame = 1 Query: 178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 MA KRI KEL DL +DPP CSAGPV EDMFHWQATIMGP DSPY G F +T F YPF+ K F Sbjct: 1 MALKRIHKELNDLAQDPPAQCSAGPVGEDMFHWQATIMGPNDSPYQGGAFFLTIDFPTEYPFKPPKVEF 69
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UBC5_YEAST (Ubiquitin-conjugating enzyme E2-16 kDa OS=Saccharomyces cerevisiae GN=UBC5 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 1.401e-17 Identity = 41/68 (60.29%), Postives = 51/68 (75.00%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 +SKRI KEL DL +DPP SCSAGPV +D++HWQA+IMGP DSPY GVF ++ +F YPF+ K F Sbjct: 3 SSKRIAKELSDLGRDPPASCSAGPVGDDLYHWQASIMGPSDSPYAGGVFFLSIHFPTDYPFKPPKVNF 70
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UBC12_ARATH (Probable ubiquitin-conjugating enzyme E2 12 OS=Arabidopsis thaliana GN=UBC12 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.389e-17 Identity = 45/70 (64.29%), Postives = 53/70 (75.71%), Query Frame = 1 Query: 178 MASKRILKELKDLQKDPPTSCSAGPVAE-DMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 MASKRI +EL+D+Q+ PP +CSAGPVAE D+FHWQATIMGP DSPY GVF V+ F YPF+ K F Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYPFKPPKVNF 70
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UBC4_CANAL (Ubiquitin-conjugating enzyme E2 4 OS=Candida albicans GN=UBC4 PE=2 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.120e-17 Identity = 40/66 (60.61%), Postives = 51/66 (77.27%), Query Frame = 1 Query: 178 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHK 375 M+ KRI KEL DL +DPP+SCSAGPV +D++HWQA+IMGPPDSPY GVF ++ +F YP + K Sbjct: 1 MSLKRINKELSDLGRDPPSSCSAGPVGDDLYHWQASIMGPPDSPYAGGVFFLSIHFPTDYPLKPPK 66
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UB2E1_MOUSE (Ubiquitin-conjugating enzyme E2 E1 OS=Mus musculus GN=Ube2e1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.341e-11 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 ++KRI KEL D+ DPP +CSAGP ++++ W++TI+GPP S Y GVF + F YPF+ K F Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTF 115
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UB2E1_HUMAN (Ubiquitin-conjugating enzyme E2 E1 OS=Homo sapiens GN=UBE2E1 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.341e-11 Identity = 32/68 (47.06%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 ++KRI KEL D+ DPP +CSAGP ++++ W++TI+GPP S Y GVF + F YPF+ K F Sbjct: 48 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTF 115
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UBCD2_DROME (Ubiquitin-conjugating enzyme E2-24 kDa OS=Drosophila melanogaster GN=UbcD2 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.700e-11 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 ++KRI KEL ++ DPP +CSAGP ++++ W +TI+GPP S Y GVF + +F YPF+ K F Sbjct: 87 SAKRIQKELAEITLDPPPNCSAGPKGDNLYEWVSTILGPPGSVYEGGVFFLDIHFSPEYPFKPPKVTF 154
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UB2E3_MOUSE (Ubiquitin-conjugating enzyme E2 E3 OS=Mus musculus GN=Ube2e3 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 9.722e-11 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GVF + F YPF+ K F Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTF 129
BLAST of DY270428 vs. ExPASy Swiss-Prot
Match: UB2E3_HUMAN (Ubiquitin-conjugating enzyme E2 E3 OS=Homo sapiens GN=UBE2E3 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 9.722e-11 Identity = 31/68 (45.59%), Postives = 45/68 (66.18%), Query Frame = 1 Query: 181 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPPDSPYV*GVFLVTNYFRHYYPFRRHKGRF 384 ++KRI KEL ++ DPP +CSAGP ++++ W++TI+GPP S Y GVF + F YPF+ K F Sbjct: 62 SAKRIQKELAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFSSDYPFKPPKVTF 129 The following BLAST results are available for this feature:
BLAST of DY270428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270428 ID=DY270428; Name=DY270428; organism=Citrus clementina; type=EST; length=1311bpback to top |