DY270430

Overview
NameDY270430
Unique NameDY270430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIE_SCHMA (Peptidyl-prolyl cis-trans isomerase E OS=Schistosoma mansoni PE=1 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 7.974e-42
Identity = 89/174 (51.15%), Postives = 112/174 (64.37%), Query Frame = 3
Query:  111 IQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            ++ KK  +NL     +V+FD+ I    AGRIVM L    VP+TAENFRALCTGE+G G       Y    FHR+IP FM Q            +SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V
Sbjct:  102 MRTKKQKRNLP----RVFFDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPV 264          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIH_NEUCR (Peptidyl-prolyl cis-trans isomerase H OS=Neurospora crassa GN=cyp-3 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.041e-41
Identity = 89/146 (60.96%), Postives = 101/146 (69.18%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            V+FD+ + G+P GRI   LF   VP+TAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              IYG K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LDG+HVVFGKV+ GMDVV K+E
Sbjct:   14 VFFDITLGGEPLGRITFELFKDVVPRTAENFRQFCTGESK-NNLGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIYGTKSFADENFLLKHDTPGLLSMANAGPNTNGSQFFITTVPTPFLDGKHVVFGKVVDGMDVVKKME 158          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPID_CANGA (Peptidyl-prolyl cis-trans isomerase D OS=Candida glabrata GN=CPR6 PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.041e-41
Identity = 88/158 (55.70%), Postives = 105/158 (66.46%), Query Frame = 3
Query:  156 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPK 623
            K YFD+ I G P GRIV  L+   VPKTAENF  LC G+ G+ KS    PL YKGS FHR+I  FM+Q            ESIYGEKF DENF++KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +  ++GT K
Sbjct:    5 KAYFDISIGGTPKGRIVFELYKDVVPKTAENFLKLCEGKSGMAKSKPDVPLSYKGSIFHRVIKDFMIQFGDFTNFDGTGGESIYGEKFEDENFEIKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIEGKRLVRLIEKQQTEDGTDK 162          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIH_GIBZE (Peptidyl-prolyl cis-trans isomerase H OS=Gibberella zeae GN=CYP3 PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 5.169e-41
Identity = 90/147 (61.22%), Postives = 100/147 (68.03%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 596
            V+FD+ I G+P GRI   LF   VPKTAENFR  CTGE      G+P  YKGS FHRIIP+FM Q              I+G K F DENF LKH  PGLLSMANAGP+TNGSQFFITTV T +LD +HVVFGKV  GMDVV K+EA
Sbjct:   14 VFFDITIGGEPLGRITFELFKDVVPKTAENFRQFCTGESKT-PVGRPQGYKGSKFHRIIPNFMCQGGDFLNGDGTGSTCIWGFKSFEDENFTLKHDQPGLLSMANAGPNTNGSQFFITTVPTPFLDNKHVVFGKVFEGMDVVKKMEA 159          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIE_SCHJA (Peptidyl-prolyl cis-trans isomerase E (Fragment) OS=Schistosoma japonicum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 5.169e-41
Identity = 87/174 (50.00%), Postives = 111/174 (63.79%), Query Frame = 3
Query:  111 IQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            ++ KK  +NL     +V+FD+ I     GRIVM L    VP+TAENFRALCTG++G G       Y    FHR+IP FM Q            +SIYG KF DENF+L+H G G+LSMAN+GP+TNGSQFFI T    WLDG+HVVFG+V+ G +VV K+E+ G ++G  K  V
Sbjct:    8 MRTKKQKRNLP----RVFFDIRIGNADRGRIVMELRSDIVPRTAENFRALCTGDRGFG-------YHNCCFHRVIPQFMCQGGDFVKGDGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPV 170          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PAL4A_HUMAN (Peptidylprolyl cis-trans isomerase A-like 4A OS=Homo sapiens GN=PPIAL4A PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 5.169e-41
Identity = 85/162 (52.47%), Postives = 103/162 (63.58%), Query Frame = 3
Query:  147 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            + + ++FD+ + GKP GRI +  F   +PKTAENFRAL TGEKG         YKGS FHRIIP FM Q            +SIYGEKF DEN   KHTG G+LSMANAGP+TNGSQFFI T  T WLDG+HV FGKV   +++V  +E  G +N     K+
Sbjct:    2 VNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGF-------RYKGSCFHRIIPGFMCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKI 156          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIH_CRYNE (Peptidyl-prolyl cis-trans isomerase H OS=Cryptococcus neoformans GN=CYP3 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.751e-41
Identity = 88/160 (55.00%), Postives = 105/160 (65.62%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVR 635
            V+FD+ I   PAGRI M LF    PKTAENFR LCTGE  I  +  P  YK +TFHR+IP FM+Q             SIYG +F DENFK+KHTGPGLLSMAN+GP+TNG QFFITT    +LDG+H VFG+V+ G+  V K+E      N  PK +VR
Sbjct:   15 VFFDISIGDTPAGRIKMELFDDITPKTAENFRQLCTGEHRI--NSVPQGYKKATFHRVIPQFMVQGGDFVRGDGTGSFSIYGAQFEDENFKVKHTGPGLLSMANSGPNTNGCQFFITTAPAEFLDGKHCVFGRVIDGLLTVRKIENVPTGANNRPKLQVR 172          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CYPH_NEUCR (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Neurospora crassa GN=NCU00726 PE=1 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 6.751e-41
Identity = 99/189 (52.38%), Postives = 115/189 (60.85%), Query Frame = 3
Query:   96 ATFSSIQAKKSDQNLKEITNKVYFDVEIAG-------KP-------AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVL--SGMDVVYKVEAEGRQNG 614
            ATFS  +A     +   I +KV+FD+E  G       KP       +GRI   L+   VPKTA NF+ LCTG+ G G       YKGS+FHRIIP FMLQ            +SIYGEKF DENF  KH  PGLLSMANAGP+TNGSQFF+TTV TSWLDGRHVVFG+V     M VV  +EA G  +G
Sbjct:   29 ATFSCARAFSQTSS---IMSKVFFDLEWEGPVLGPNNKPTSEIKAQSGRINFTLYDDVVPKTARNFKELCTGQNGFG-------YKGSSFHRIIPEFMLQGGDFTRGNGTGGKSIYGEKFADENFAKKHVRPGLLSMANAGPNTNGSQFFVTTVPTSWLDGRHVVFGEVADDESMKVVKALEATGSSSG 207          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: RBP2_MOUSE (E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=Ranbp2 PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.565e-40
Identity = 86/164 (52.44%), Postives = 104/164 (63.41%), Query Frame = 3
Query:  141 KEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            K+    V+FDV   G+P GRI+M LF   VP+TAENFRALCTGEKG G       +K S FHR++P F+ Q            +SIYG+KF DENF LKHTGPGLLSMAN G +TN SQFFIT      LD +HVVFG V  GMD V K+E+ G   G+   ++
Sbjct: 2889 KDTNPVVFFDVCADGEPLGRIIMELFSNIVPQTAENFRALCTGEKGFG-------FKNSIFHRVVPDFICQGGDITKYNGTGGQSIYGDKFDDENFDLKHTGPGLLSMANYGQNTNSSQFFITLKKAEHLDFKHVVFGFVKDGMDTVRKIESFGSPKGSVSRRI 3045          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPID_KLULA (Peptidyl-prolyl cis-trans isomerase D OS=Kluyveromyces lactis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 2.565e-40
Identity = 88/154 (57.14%), Postives = 99/154 (64.29%), Query Frame = 3
Query:  138 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            + E   K +FD+ I GKPAGRIV  L+   VPKTAENF  LC G  G  KS    PL YKGS FHR+I SFM Q            ESIYGEKF DENF LKH  P LLSMANAG +TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E
Sbjct:    1 MSETRPKTFFDISIGGKPAGRIVFELYSDVVPKTAENFLKLCEGNSGFAKSKPDIPLSYKGSIFHRVIKSFMCQFGDFTNFNGTGGESIYGEKFEDENFTLKHDKPFLLSMANAGANTNGSQCFITCVPTPHLDGKHVVFGEVIQGKRLVRTIE 154          
The following BLAST results are available for this feature:
BLAST of DY270430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
PPIE_SCHMA7.974e-4251.15Peptidyl-prolyl cis-trans isomerase E OS=Schistoso... [more]
PPIH_NEUCR1.041e-4160.96Peptidyl-prolyl cis-trans isomerase H OS=Neurospor... [more]
PPID_CANGA1.041e-4155.70Peptidyl-prolyl cis-trans isomerase D OS=Candida g... [more]
PPIH_GIBZE5.169e-4161.22Peptidyl-prolyl cis-trans isomerase H OS=Gibberell... [more]
PPIE_SCHJA5.169e-4150.00Peptidyl-prolyl cis-trans isomerase E (Fragment) O... [more]
PAL4A_HUMAN5.169e-4152.47Peptidylprolyl cis-trans isomerase A-like 4A OS=Ho... [more]
PPIH_CRYNE6.751e-4155.00Peptidyl-prolyl cis-trans isomerase H OS=Cryptococ... [more]
CYPH_NEUCR6.751e-4152.38Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
RBP2_MOUSE2.565e-4052.44E3 SUMO-protein ligase RANBP2 OS=Mus musculus GN=R... [more]
PPID_KLULA2.565e-4057.14Peptidyl-prolyl cis-trans isomerase D OS=Kluyverom... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270430 ID=DY270430; Name=DY270430; organism=Citrus clementina; type=EST; length=1294bp
CAAAGTGAGTGACTTCGAAACGAGAAACAACGAAGTGATACATGGCTTCG
ACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCAC
TTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCA
CAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACGT
ATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTT
CCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCAC
TCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCTT
CAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTA
TGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCCAG
GGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAATTC
TTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATT
TGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAG
GGAGGCAGAATGGCACTCCCAAGAGCAAAGTCCGTCATTGCAGACAGCGG
TGAACTTCCTCTGTGATTTCCCCCATAATTAAATAATTACGCTATACACC
TTTTTAGTCCTCTTGTCTTTTCAACCTTCTGGAAAAAACTCCATAATTTG
CCCTATTTACCATGGAAAAACATTTTAAATCGTTCTTCGTTGTCTGCAAT
CCCGGTGCGTCATTTGACAGGGATCATTTTCTCTGAAAAGTAATACAATA
CTTTTAGAGGTTGCATATCGAACTGTGGAAAAATAACCAAATGGAATCCC
ACCCAACAACCTTCCAAACTCAGAAATACCTCCTCAAATTATAAAATACT
AACCATCCTCCACTCTTGCTCAAATTACTTTGTATACGCAAACGCAACTC
CTTTAATACATTTTTCCGCACGAGTTGTGGTTAGAAGCCGACACAAAACG
ATACTGATCACTACCCCATCCTGCTCTACACCCTACCCACACCTTTTTTC
TGTTACTTAAGTGTCTTTGTCCTGCGTTGTCGCTTCTCTTCGTTACTATC
GCCGTATCCCTCAGTCAATCGACCCTACTAATGAAAAGAGTACATACACT
AATAATAAACTACGATCCTCAAATCCACGCTTTGAAGTGATCACGTTATA
AATATCATCAACCTAGCAATTACTAATGTGCAATGGCCTATTAG
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