DY270430

Overview
NameDY270430
Unique NameDY270430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CYP9_CAEBR (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis briggsae GN=cyn-9 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 2.747e-34
Identity = 78/170 (45.88%), Postives = 104/170 (61.18%), Query Frame = 3
Query:  138 LKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG---MDVVYKVEAEGRQNGTPKSKVR 635
            +  +  +V+ D+ +  KP GRI + LF    PKT ENFRALCTGE G+  + K  LHYKG+  HR++  FM+Q             SIYG  F DE F LKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G   +DV+  +E +G+    P +KVR
Sbjct:    1 MSSLEKRVFLDMALDEKPIGRIEIKLFTSEAPKTCENFRALCTGEVGMAPNNKARLHYKGNEIHRVVKKFMIQGGDITDGDGRGGFSIYGRYFDDEKFVLKHSKPYLLSMANKGPNSNSSQFFITTAPAPHCNGKHVVFGEVIKGREVVDVLDNLEVDGKSK--PIAKVR 168          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 6.120e-34
Identity = 82/156 (52.56%), Postives = 96/156 (61.54%), Query Frame = 3
Query:  156 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLS-GMDVVYKVEAEGRQNGTP 620
            K + D+EI G+ AGRIV+ L G  VPKT +NF         IG   K   YKGSTFHR+I  FM+Q             SIYG +F DENF LKH   G++SMANAGP+TNGSQFFITTV T WLDGRHVVFGK+ +     V  +EA G   G P
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNF---------IGLFDK---YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRP 166          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 1.044e-33
Identity = 85/181 (46.96%), Postives = 110/181 (60.77%), Query Frame = 3
Query:  120 KKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYG-EKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPK--SKVRHCRQ 647
            KKS+Q  + +   V+FD+ I   P GR+ M LF   VP+TAENFR LCTGE    ++G P  YK   FHR+I  FM+Q              IYG ++F DENF  KHTG GLLSMAN+GP++NG QFFIT     +LDG+HVVFG+++ G+  + K+E  A G  N  PK   K+  C Q
Sbjct:    3 KKSNQVERPV---VFFDISIGDVPVGRMKMELFSDIVPRTAENFRQLCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATG-PNNRPKLPVKITECGQ 177          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIH_USTMA (Peptidyl-prolyl cis-trans isomerase H (Fragment) OS=Ustilago maydis GN=CYP3 PE=3 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 3.358e-32
Identity = 78/150 (52.00%), Postives = 90/150 (60.00%), Query Frame = 3
Query:  189 PAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVR 635
            PAGR+   LF   VP+T+ENFR LCTGE     +  P  YK S FHRII  FM Q             SIYG+KF DENF LKH   GLLSMAN+GP TNG QFFIT     +LDG+HVVFGKV+ G+  + K+E      N  PK  VR
Sbjct:    2 PAGRLKCELFSDIVPRTSENFRQLCTGE--FRPNHVPEGYKNSIFHRIIKDFMCQGGDFINADGTGSRSIYGDKFDDENFTLKHDKAGLLSMANSGPGTNGCQFFITAQPCPFLDGKHVVFGKVVDGLLTLRKMENVPTGANNRPKMAVR 149          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CYP9_CAEEL (Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhabditis elegans GN=cyn-9 PE=2 SV=3)

HSP 1 Score: 139.428 bits (350), Expect = 4.386e-32
Identity = 72/143 (50.35%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  156 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKP-LHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVV 581
            +V+ D+ +     GRI + LF +  PKT ENFRALCTGE G+  + K  LHYK + FHRI+  FM+Q             SIYG  F DE FKLKH+ P LLSMAN GP++N SQFFITT      +G+HVVFG+V+ G +VV
Sbjct:    6 RVFLDISVDENLIGRIEIRLFVEDAPKTCENFRALCTGEVGMTPNNKARLHYKQNEFHRIVKKFMIQGGDITEGDGRGGFSIYGRYFDDEKFKLKHSRPYLLSMANKGPNSNSSQFFITTAAAPHCNGKHVVFGEVVKGQNVV 148          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL6_BOVIN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos taurus GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 2.407e-30
Identity = 70/186 (37.63%), Postives = 103/186 (55.38%), Query Frame = 3
Query:   75 LWAIVLFATFSSIQAKKSDQNLKEIT----NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTP 620
            +W IV F   +  +A   D + K +     N V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  +SG  LHY GS FHR++ +  +Q            ESIYG  F DENF + H   G+L M N G  +NGSQF+IT     +LD ++V FG+++ G DV++ +E+   +N  P
Sbjct:  108 VWDIVDFKPPALYEALTVDYSAKFLRDTKHNFVFLDISIDLYPIGRLIFELYSDTCPKTCKNFQILCTGKAGFSQSGIKLHYTGSIFHRVVRNGWVQGGDIVAGKGDNGESIYGPTFEDENFSVPHNKRGVLGMVNKGRHSNGSQFYITLQAAPYLDKKYVAFGQLIEGTDVLHHLESVPTENERP 293          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL6_HUMAN (Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo sapiens GN=PPIL6 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 3.475e-29
Identity = 66/162 (40.74%), Postives = 92/162 (56.79%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVRHCR 644
            V+ D+ I   P GR++  L+    PKT +NF+ LCTG+ G  + G  LHYK S FHRI+ +  +Q            ESIYG  F DENF + H   G+L MAN G  +NGSQF+IT   T +LD + V FG+++ G +V+ ++E    QN  P   +  CR
Sbjct:  144 VFLDICIDSSPIGRLIFELYCDVCPKTCKNFQVLCTGKAGFSQRGIRLHYKNSIFHRIVQNGWIQGGDIVYGKGDNGESIYGPTFEDENFSVPHNKRGVLGMANKGRHSNGSQFYITLQATPYLDRKFVAFGQLIEGTEVLKQLELVPTQNERP---IHMCR 302          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_TREPA (Probable peptidyl-prolyl cis-trans isomerase OS=Treponema pallidum GN=ppiB PE=1 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.785e-25
Identity = 67/135 (49.63%), Postives = 83/135 (61.48%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 596
            G IV+ LF +  P T  NF  L  G   + K G+P  Y+G TFHR+I  FM+Q                G +FPDE +  L+H  PG+LSMANAGP TNGSQFFIT V T WLDG+H VFGKV+ GM+VV+ + A
Sbjct:   49 GTIVLSLFFEKAPLTVCNFVGLAEGTLAVCK-GRPF-YQGLTFHRVIKDFMIQGGDPQGNGTGGP----GYQFPDECDPALRHDSPGVLSMANAGPGTNGSQFFITHVATPWLDGKHTVFGKVVEGMEVVHAIIA 177          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL1_ASPOR (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspergillus oryzae GN=cyp1 PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 6.782e-25
Identity = 66/154 (42.86%), Postives = 86/154 (55.84%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK---VEAEGRQNGTPKSKVRHCR 644
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFF+T   T WLDG+H +FG+V SGM V+ +   V+  G      + K+   R
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRADLKHTGAGILSMANSGPNTNGSQFFVTLAPTPWLDGKHTIFGRVKSGMRVIQRMGLVKTNGEDRPVDEVKIIRAR 154          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL1_EMENI (Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emericella nidulans GN=cyp1 PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 1.157e-24
Identity = 62/133 (46.62%), Postives = 80/133 (60.15%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            G   + L+    PKT +NF  L   ++G        +Y    FHRIIP+FM+Q             SIYGEKF DE    LKHTG G+LSMAN+GP+TNGSQFFIT   T WLDG+H +FG+V SGM ++ ++
Sbjct:   12 GSFTVELYNSHAPKTCKNFATLA--QRG--------YYNNVIFHRIIPNFMVQTGDPTGTGRGG-SSIYGEKFEDEIRSDLKHTGAGILSMANSGPNTNGSQFFITLAPTPWLDGKHTIFGRVKSGMRIIQRM 133          
The following BLAST results are available for this feature:
BLAST of DY270430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CYP9_CAEBR2.747e-3445.88Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIA_NEOCA6.120e-3452.56Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]
PPIH_RHIOR1.044e-3346.96Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
PPIH_USTMA3.358e-3252.00Peptidyl-prolyl cis-trans isomerase H (Fragment) O... [more]
CYP9_CAEEL4.386e-3250.35Peptidyl-prolyl cis-trans isomerase 9 OS=Caenorhab... [more]
PPIL6_BOVIN2.407e-3037.63Peptidyl-prolyl cis-trans isomerase-like 6 OS=Bos ... [more]
PPIL6_HUMAN3.475e-2940.74Peptidyl-prolyl cis-trans isomerase-like 6 OS=Homo... [more]
PPIB_TREPA1.785e-2549.63Probable peptidyl-prolyl cis-trans isomerase OS=Tr... [more]
PPIL1_ASPOR6.782e-2542.86Peptidyl-prolyl cis-trans isomerase-like 1 OS=Aspe... [more]
PPIL1_EMENI1.157e-2446.62Peptidyl-prolyl cis-trans isomerase-like 1 OS=Emer... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270430 ID=DY270430; Name=DY270430; organism=Citrus clementina; type=EST; length=1294bp
CAAAGTGAGTGACTTCGAAACGAGAAACAACGAAGTGATACATGGCTTCG
ACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCAC
TTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCA
CAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACGT
ATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTT
CCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCAC
TCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCTT
CAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTA
TGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCCAG
GGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAATTC
TTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATT
TGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAG
GGAGGCAGAATGGCACTCCCAAGAGCAAAGTCCGTCATTGCAGACAGCGG
TGAACTTCCTCTGTGATTTCCCCCATAATTAAATAATTACGCTATACACC
TTTTTAGTCCTCTTGTCTTTTCAACCTTCTGGAAAAAACTCCATAATTTG
CCCTATTTACCATGGAAAAACATTTTAAATCGTTCTTCGTTGTCTGCAAT
CCCGGTGCGTCATTTGACAGGGATCATTTTCTCTGAAAAGTAATACAATA
CTTTTAGAGGTTGCATATCGAACTGTGGAAAAATAACCAAATGGAATCCC
ACCCAACAACCTTCCAAACTCAGAAATACCTCCTCAAATTATAAAATACT
AACCATCCTCCACTCTTGCTCAAATTACTTTGTATACGCAAACGCAACTC
CTTTAATACATTTTTCCGCACGAGTTGTGGTTAGAAGCCGACACAAAACG
ATACTGATCACTACCCCATCCTGCTCTACACCCTACCCACACCTTTTTTC
TGTTACTTAAGTGTCTTTGTCCTGCGTTGTCGCTTCTCTTCGTTACTATC
GCCGTATCCCTCAGTCAATCGACCCTACTAATGAAAAGAGTACATACACT
AATAATAAACTACGATCCTCAAATCCACGCTTTGAAGTGATCACGTTATA
AATATCATCAACCTAGCAATTACTAATGTGCAATGGCCTATTAG
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