DY270430

Overview
NameDY270430
Unique NameDY270430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_BOVIN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bos taurus GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 2.187e-15
Identity = 55/157 (35.03%), Postives = 76/157 (48.41%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVY------KVEAEGRQNGTPKSKVRHC 641
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D VY      +V+ +  +      K+R C
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGVPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNMLRLTEVDIDDEERPRNSHKIRSC 164          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_DANRE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Danio rerio GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 3.730e-15
Identity = 52/134 (38.81%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            AG I + L+ K  PK   NF  LC             +Y G+ FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKETPKACRNFVQLCMEG----------YYDGTIFHRMVPEFIVQGGDPTGTGTGG-ESIYGRPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_MOUSE (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mus musculus GN=Sdccag10 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 8.310e-15
Identity = 51/134 (38.06%), Postives = 68/134 (50.75%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_RAT (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Rattus norvegicus GN=Sdccag10 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.085e-14
Identity = 50/134 (37.31%), Postives = 68/134 (50.75%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ES+YG  F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGTGG-ESVYGAPFKDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_XENLA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xenopus laevis GN=sdccag10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.417e-14
Identity = 48/134 (35.82%), Postives = 69/134 (51.49%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ES++G+ F DE + +L+    GL++MANAGP  NGSQFF T      L+ +H +FGKV    D +Y +
Sbjct:   21 AGEIDIELWSKEAPKACRNFVQLCLEG----------YYDNTIFHRVVPEFIIQGGDPTGTGTGG-ESVFGKPFRDEFHSRLRFNRRGLVAMANAGPHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTIYNI 141          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL2_GIBZE (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibberella zeae GN=CYP8 PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.417e-14
Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALC-TGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            G + + L+ +  PK   NF  L  TG           +YKG  FHR IP+FM+Q            +S++G+ F DE +  + H G G LSMAN G +TN SQFF     T  LD +H VFGKV+  ++V+ K+E
Sbjct:  332 GDLTIELYPEFAPKAVWNFIKLSQTG-----------YYKGVAFHRNIPNFMIQGGDPSGSGRGG-QSVWGKYFDDEFDGPMTHNGRGTLSMANKGKNTNSSQFFFAYKPTPHLDRKHTVFGKVVENINVLSKME 454          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_PONAB (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Pongo abelii GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVY------KVEAEGRQNGTPKSKVRHC 641
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAG   NGSQFF T      L+ +H +FGKV    D VY      +V+ +  +      K++ C
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNMLRLSEVDIDDEERPHNPHKIKSC 164          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_MACFA (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Macaca fascicularis GN=SDCCAG10 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 53/157 (33.76%), Postives = 75/157 (47.77%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVY------KVEAEGRQNGTPKSKVRHC 641
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAG   NGSQFF T      L+ +H +FGKV    D VY      +V+ +  +      K++ C
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNMLRLSEVDIDDEERPHNPHKIKSC 164          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPI1_STAS1 (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229) GN=SSP1821 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.386e-14
Identity = 58/157 (36.94%), Postives = 68/157 (43.31%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFIT----------------------------TVTTSWLDGRHVVFGKVLSGMDVV 581
            G +   L     PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYGE F DE  K      G LSMANAGP TNGSQFFI                             T  T WLD +H VFG+++ G D +
Sbjct:   25 GDMTFKLLPDVAPKTVENFVTHA-------KNG---YYNGVTFHRVINDFMVQGGDPTATGMGG-ESIYGEPFEDEFSKEAFNIYGALSMANAGPHTNGSQFFIVQMNEVPESMLSQLADGGWPEPIVKAYAETGGTPWLDQKHTVFGQLIEGKDTL 170          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: SDC10_HUMAN (Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Homo sapiens GN=SDCCAG10 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 7.035e-14
Identity = 50/134 (37.31%), Postives = 67/134 (50.00%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV 590
            AG I + L+ K  PK   NF  LC             +Y  + FHR++P F++Q            ESIYG  F DE + +L+    GL++MANAG   NGSQFF T      L+ +H +FGKV    D VY +
Sbjct:   21 AGDIDIELWSKEAPKACRNFIQLCL----------EAYYDNTIFHRVVPGFIVQGGDPTGTGSGG-ESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVTG--DTVYNM 141          
The following BLAST results are available for this feature:
BLAST of DY270430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
SDC10_BOVIN2.187e-1535.03Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Bo... [more]
SDC10_DANRE3.730e-1538.81Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Da... [more]
SDC10_MOUSE8.310e-1538.06Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Mu... [more]
SDC10_RAT1.085e-1437.31Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ra... [more]
SDC10_XENLA1.417e-1435.82Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Xe... [more]
PPIL2_GIBZE1.417e-1438.52Peptidyl-prolyl cis-trans isomerase-like 2 OS=Gibb... [more]
SDC10_PONAB5.386e-1433.76Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Po... [more]
SDC10_MACFA5.386e-1433.76Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ma... [more]
PPI1_STAS15.386e-1436.94Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
SDC10_HUMAN7.035e-1437.31Peptidyl-prolyl cis-trans isomerase SDCCAG10 OS=Ho... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270430 ID=DY270430; Name=DY270430; organism=Citrus clementina; type=EST; length=1294bp
CAAAGTGAGTGACTTCGAAACGAGAAACAACGAAGTGATACATGGCTTCG
ACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCAC
TTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCA
CAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACGT
ATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTT
CCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCAC
TCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCTT
CAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTA
TGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCCAG
GGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAATTC
TTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATT
TGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAG
GGAGGCAGAATGGCACTCCCAAGAGCAAAGTCCGTCATTGCAGACAGCGG
TGAACTTCCTCTGTGATTTCCCCCATAATTAAATAATTACGCTATACACC
TTTTTAGTCCTCTTGTCTTTTCAACCTTCTGGAAAAAACTCCATAATTTG
CCCTATTTACCATGGAAAAACATTTTAAATCGTTCTTCGTTGTCTGCAAT
CCCGGTGCGTCATTTGACAGGGATCATTTTCTCTGAAAAGTAATACAATA
CTTTTAGAGGTTGCATATCGAACTGTGGAAAAATAACCAAATGGAATCCC
ACCCAACAACCTTCCAAACTCAGAAATACCTCCTCAAATTATAAAATACT
AACCATCCTCCACTCTTGCTCAAATTACTTTGTATACGCAAACGCAACTC
CTTTAATACATTTTTCCGCACGAGTTGTGGTTAGAAGCCGACACAAAACG
ATACTGATCACTACCCCATCCTGCTCTACACCCTACCCACACCTTTTTTC
TGTTACTTAAGTGTCTTTGTCCTGCGTTGTCGCTTCTCTTCGTTACTATC
GCCGTATCCCTCAGTCAATCGACCCTACTAATGAAAAGAGTACATACACT
AATAATAAACTACGATCCTCAAATCCACGCTTTGAAGTGATCACGTTATA
AATATCATCAACCTAGCAATTACTAATGTGCAATGGCCTATTAG
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