DY270430

Overview
NameDY270430
Unique NameDY270430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CWC27_RHIOR (Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae GN=cwc27 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 1.200e-13
Identity = 63/193 (32.64%), Postives = 88/193 (45.60%), Query Frame = 3
Query:  105 SSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSG--MDVVYKVEAEGRQNGTPKSKVRHCRQR*TSSVISP 674
            S+I A +   N K I +    D+EI           L+GK  P+   NF  LC             +Y  + FHRI+P F++Q            ES+Y + FPDE + +L+    GL+ +AN G + NGSQFFIT      L  RH +FG+V      +V+   E E  +N  P    R  R   T  VI+P
Sbjct:    2 SNIYALEPHTNAKVILHTTSGDIEIE----------LWGKEAPRATRNFIQLCLEG----------YYDNTIFHRIVPGFLVQGGDPTGTGQGG-ESVYEDGFPDEFHSRLRFNRRGLVGVANTGQNDNGSQFFITLDRADELTKRHTLFGRVAGDTLFNVMKMTELEIDENERPLYPPRIKR---TEIVINP 170          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL2_USTMA (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Ustilago maydis GN=CYP8 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.491e-13
Identity = 57/140 (40.71%), Postives = 70/140 (50.00%), Query Frame = 3
Query:  219 GKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK---LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD--VVYKVEAEGRQNGTPK 623
            GKA PKT  NF  LC       K GK   Y  + FHR IP FM+Q             SI+   F DE  +    KH   G+LSMAN G DTN SQFFIT      LDG+H VFG+++ G     + K+E    + GT +
Sbjct:  311 GKA-PKTCFNFLQLC-------KHGK---YDDTLFHRNIPGFMIQGGDPTGTGRGG-SSIWNSNFRDEFNEPGAFKHDTRGVLSMANKGKDTNASQFFITYRGVPHLDGKHTVFGRLVDGDKDATLTKMEQVPSEQGTDR 438          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL3_USTMA (Peptidyl-prolyl cis-trans isomerase-like 3 OS=Ustilago maydis GN=CYP10 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.327e-12
Identity = 48/128 (37.50%), Postives = 64/128 (50.00%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD 575
            G I + +F  A P+ AENF   C              Y    +HR I SFM+Q            +SI+G+ F DE    LK    G+++ ANAGPDTN SQFFIT      LDG++ + GKV+ G +
Sbjct:   10 GDIKVEVFCDATPRAAENFLGHCAAGT----------YNDVKWHRNIKSFMIQTGDPTGTGKGG-QSIWGKPFADEIRSSLKFDRRGIVACANAGPDTNKSQFFITYAKQPHLDGKYTIIGKVIDGAE 126          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL2_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizosaccharomyces pombe GN=cyp8 PE=2 SV=3)

HSP 1 Score: 74.3294 bits (181), Expect = 1.733e-12
Identity = 43/113 (38.05%), Postives = 63/113 (55.75%), Query Frame = 3
Query:  303 HYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFK-LKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVR 635
            +Y+ + FHR I  FM+Q            +SI+G+ F DE    LKH   G++SMAN G +TNGSQFFI       LD +H +FG+V+ G++V+  +E      N  PK  ++
Sbjct:  311 YYRNTIFHRNIARFMIQGGDPSGTGRGG-QSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYGPAKHLDNKHTIFGRVVGGLNVLDALEKVPTNSNDHPKLPIK 422          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPI1_STAES (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0648 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.733e-12
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 569
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPI1_STAEQ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0540 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.733e-12
Identity = 55/153 (35.95%), Postives = 66/153 (43.14%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 569
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFFI  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTH-------SKNG---YYDGVTFHRVINDFMVQGGDPTATGMGG-ESIYGSAFEDEFSLEAFNLYGALSMANAGPNTNGSQFFIVQMKEVPENMLSQLADGGWPQPIVEAYGEKGGTPWLDQKHTVFGQLIEG 166          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPI1_STAHJ (Putative peptidyl-prolyl cis-trans isomerase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH1997 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.263e-12
Identity = 54/153 (35.29%), Postives = 66/153 (43.14%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT----------------------------TSWLDGRHVVFGKVLSG 569
            G +   LF    PKT ENF           K+G   +Y G TFHR+I  FM+Q            ESIYG  F DE         G LSMANAGP+TNGSQFF+  +                             T WLD +H VFG+++ G
Sbjct:   25 GDMTFKLFPDIAPKTVENFVTHA-------KNG---YYDGITFHRVINDFMIQGGDPTATGMGG-ESIYGGSFEDEFSLEAFNLYGALSMANAGPNTNGSQFFVVQMKEVPESMVNQLVDGGWPEPIAKAYADNGGTPWLDQKHTVFGQLIEG 166          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: BPPI_STRP6 (Putative bifunctional phosphatase/peptidyl-prolyl cis-trans isomerase OS=Streptococcus pyogenes serotype M6 GN=M6_Spy1377 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 2.263e-12
Identity = 55/150 (36.67%), Postives = 67/150 (44.67%), Query Frame = 3
Query:  195 GRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVT---------------------------TSWLDGRHVVFGKVL 563
            G + + LF    PKT  NF        G+ K G   +Y G  FHRIIP FM+Q            +SIYGE F DE     +   G LSMANAGP+TNGSQFFI   +                           T  LD RH VFG+++
Sbjct:  297 GDMTLVLFPDHAPKTVANFL-------GLAKEG---YYDGIIFHRIIPEFMIQGGDPTGTGMGG-QSIYGESFEDEFSDELYNLRGALSMANAGPNTNGSQFFIVQNSKIPYAKKELERGGWPTPIAAAYAENGGTPHLDRRHTVFGQLV 435          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIL2_NEUCR (Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neurospora crassa GN=cyp-8 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.956e-12
Identity = 53/144 (36.81%), Postives = 70/144 (48.61%), Query Frame = 3
Query:  147 ITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMD 575
            I NK Y  +E      G + + L  +  PK   NF  L   EKG        +Y+   FHR I +FM+Q             SI+G+ F DE      H+  G++SMAN G +TN SQFFIT    S LD +H +F KV+ G D
Sbjct:  326 IKNKGYVRMETN---LGPLTLELLPEFAPKAVWNFLRL--SEKG--------YYRDVAFHRSIRNFMIQGGDPSGTGRGG-SSIWGKNFEDEFEGPNTHSARGIVSMANKGKNTNSSQFFITYRPASHLDRKHTIFAKVIEGQD 455          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CWC27_CRYNE (Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus neoformans GN=CWC27 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 2.956e-12
Identity = 49/126 (38.89%), Postives = 64/126 (50.79%), Query Frame = 3
Query:  192 AGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDE-NFKLKHTGPGLLSMANAGP-DTNGSQFFITTVTTSWLDGRHVVFGKVL 563
            AG I + L+GK  PK   NF AL              +Y G  FHR++P F++Q            ES YGE F DE + +LK    GLL MAN G  ++N SQFFIT      L  +H +FGK++
Sbjct:   21 AGEIEVELWGKECPKAVRNFLALTMEG----------YYDGVIFHRVVPGFIIQSGDPTGTGMGG-ESFYGEPFEDEIHGRLKFNRRGLLGMANNGSRNSNTSQFFITLDAAPELTNKHTMFGKIV 135          
The following BLAST results are available for this feature:
BLAST of DY270430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
CWC27_RHIOR1.200e-1332.64Peptidyl-prolyl isomerase cwc27 OS=Rhizopus oryzae... [more]
PPIL2_USTMA3.491e-1340.71Peptidyl-prolyl cis-trans isomerase-like 2 OS=Usti... [more]
PPIL3_USTMA1.327e-1237.50Peptidyl-prolyl cis-trans isomerase-like 3 OS=Usti... [more]
PPIL2_SCHPO1.733e-1238.05Peptidyl-prolyl cis-trans isomerase cyp8 OS=Schizo... [more]
PPI1_STAES1.733e-1235.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAEQ1.733e-1235.95Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
PPI1_STAHJ2.263e-1235.29Putative peptidyl-prolyl cis-trans isomerase OS=St... [more]
BPPI_STRP62.263e-1236.67Putative bifunctional phosphatase/peptidyl-prolyl ... [more]
PPIL2_NEUCR2.956e-1236.81Peptidyl-prolyl cis-trans isomerase-like 2 OS=Neur... [more]
CWC27_CRYNE2.956e-1238.89Peptidyl-prolyl isomerase CWC27 OS=Cryptococcus ne... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270430 ID=DY270430; Name=DY270430; organism=Citrus clementina; type=EST; length=1294bp
CAAAGTGAGTGACTTCGAAACGAGAAACAACGAAGTGATACATGGCTTCG
ACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCAC
TTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCA
CAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACGT
ATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTT
CCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCAC
TCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCTT
CAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTA
TGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCCAG
GGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAATTC
TTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATT
TGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAG
GGAGGCAGAATGGCACTCCCAAGAGCAAAGTCCGTCATTGCAGACAGCGG
TGAACTTCCTCTGTGATTTCCCCCATAATTAAATAATTACGCTATACACC
TTTTTAGTCCTCTTGTCTTTTCAACCTTCTGGAAAAAACTCCATAATTTG
CCCTATTTACCATGGAAAAACATTTTAAATCGTTCTTCGTTGTCTGCAAT
CCCGGTGCGTCATTTGACAGGGATCATTTTCTCTGAAAAGTAATACAATA
CTTTTAGAGGTTGCATATCGAACTGTGGAAAAATAACCAAATGGAATCCC
ACCCAACAACCTTCCAAACTCAGAAATACCTCCTCAAATTATAAAATACT
AACCATCCTCCACTCTTGCTCAAATTACTTTGTATACGCAAACGCAACTC
CTTTAATACATTTTTCCGCACGAGTTGTGGTTAGAAGCCGACACAAAACG
ATACTGATCACTACCCCATCCTGCTCTACACCCTACCCACACCTTTTTTC
TGTTACTTAAGTGTCTTTGTCCTGCGTTGTCGCTTCTCTTCGTTACTATC
GCCGTATCCCTCAGTCAATCGACCCTACTAATGAAAAGAGTACATACACT
AATAATAAACTACGATCCTCAAATCCACGCTTTGAAGTGATCACGTTATA
AATATCATCAACCTAGCAATTACTAATGTGCAATGGCCTATTAG
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