DY270430

Overview
NameDY270430
Unique NameDY270430
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1294
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_RAT (Peptidyl-prolyl cis-trans isomerase B OS=Rattus norvegicus GN=Ppib PE=2 SV=3)

HSP 1 Score: 195.667 bits (496), Expect = 5.157e-49
Identity = 97/150 (64.67%), Postives = 109/150 (72.67%), Query Frame = 3
Query:  144 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            ++T KVYFD +I  +P GR+  GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE
Sbjct:   41 KVTVKVYFDFQIGDEPVGRVTFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVE 183          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_CHICK (Peptidyl-prolyl cis-trans isomerase B OS=Gallus gallus GN=PPIB PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 5.157e-49
Identity = 98/161 (60.87%), Postives = 118/161 (73.29%), Query Frame = 3
Query:  117 AKKSDQNLK--EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            A ++D+  K  ++T KV+FD+ +  + AGR+V+GLFGK VPKT ENF AL TGEKG G       +KGS FHR+I  FM+Q            +SIYG++FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE
Sbjct:   21 ASRADERKKGPKVTAKVFFDLRVGEEDAGRVVIGLFGKTVPKTVENFVALATGEKGFG-------FKGSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGDRFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVE 174          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_MOUSE (Peptidyl-prolyl cis-trans isomerase B OS=Mus musculus GN=Ppib PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 6.735e-49
Identity = 97/151 (64.24%), Postives = 111/151 (73.51%), Query Frame = 3
Query:  144 EITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 596
            ++T KVYFD++I  +  GR+V GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV TSWLDG+HVVFGKVL GMDVV KVE+
Sbjct:   41 KVTVKVYFDLQIGDESVGRVVFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTSWLDGKHVVFGKVLEGMDVVRKVES 184          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPID_RHIOR (Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus oryzae GN=cyp12 PE=3 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 1.500e-48
Identity = 100/146 (68.49%), Postives = 107/146 (73.29%), Query Frame = 3
Query:  156 KVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 593
            +VYFD+ I  KP GRIV  LF   VPKTAENFRALCTGEKG GKSGKPL Y+GS FHRII +FM+Q            ESIYGEKF DENF LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFGKVL G  VV  +E
Sbjct:    5 RVYFDITIGNKPEGRIVFELFKDIVPKTAENFRALCTGEKGEGKSGKPLSYQGSLFHRIIKNFMIQGGDFTAGNGTGGESIYGEKFEDENFVLKHEKPFLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGKVLKGKAVVRALE 150          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIF_RAT (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Rattus norvegicus GN=Ppif PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.960e-48
Identity = 95/158 (60.13%), Postives = 111/158 (70.25%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q            +SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKI 197          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_BOVIN (Peptidyl-prolyl cis-trans isomerase B OS=Bos taurus GN=PPIB PE=1 SV=4)

HSP 1 Score: 193.741 bits (491), Expect = 1.960e-48
Identity = 102/188 (54.26%), Postives = 120/188 (63.83%), Query Frame = 3
Query:   87 VLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA---EGRQNGTPKSKVRHC 641
            V F       A    +   ++T KVYFD+ I  +  GR+V+GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GMDVV KVE+   +GR        +  C
Sbjct:   22 VFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFG-------YKDSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMDVVRKVESTKTDGRDKPLKDVTIADC 202          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CYPH_YEAST (Peptidyl-prolyl cis-trans isomerase OS=Saccharomyces cerevisiae GN=CPR1 PE=1 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.960e-48
Identity = 96/160 (60.00%), Postives = 113/160 (70.62%), Query Frame = 3
Query:  153 NKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            ++VYFDVE  G+P GR+V  L+   VPKTAENFRALCTGEKG G       Y GS FHR+IP FMLQ            +SIYG KFPDENFK  H  PGLLSMANAGP+TNGSQFFITTV   WLDG+HVVFG+V+ G D+V KVE+ G  +G  K+++
Sbjct:    2 SQVYFDVEADGQPIGRVVFKLYNDIVPKTAENFRALCTGEKGFG-------YAGSPFHRVIPDFMLQGGDFTAGNGTGGKSIYGGKFPDENFKKHHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGEVVDGYDIVKKVESLGSPSGATKARI 154          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: CP20B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic OS=Arabidopsis thaliana GN=CYP20-2 PE=1 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.960e-48
Identity = 98/167 (58.68%), Postives = 118/167 (70.66%), Query Frame = 3
Query:  144 EITNKVYFDVEIA---GKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKV 632
            +IT+KVYFD+ +    GK AGRIV+GL+G  VP+T ENFRALCTGEKG G       YKGSTFHR+I  FM+Q            +S+YG  F DENFKL H GPG+LSMANAGP+TNGSQFFI T+ TSWLDGRHVVFG+V+ GM+VV  +E +    G  P+ KV
Sbjct:   87 KITHKVYFDISVGNPVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFG-------YKGSTFHRVIRDFMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKKV 246          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIF_MOUSE (Peptidyl-prolyl cis-trans isomerase, mitochondrial OS=Mus musculus GN=Ppif PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 2.559e-48
Identity = 95/158 (60.13%), Postives = 110/158 (69.62%), Query Frame = 3
Query:  159 VYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKV 632
            VY DV   G+P GR+V+ L    VPKTAENFRALCTGEKG G       YKGSTFHR+IP+FM Q             SIYG +FPDENF LKH GPG+LSMANAGP+TNGSQFFI T+ T WLDG+HVVFG V  GMDVV K+E+ G ++G    K+
Sbjct:   47 VYLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFG-------YKGSTFHRVIPAFMCQAGDFTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGKTSKKI 197          
BLAST of DY270430 vs. ExPASy Swiss-Prot
Match: PPIB_HUMAN (Peptidyl-prolyl cis-trans isomerase B OS=Homo sapiens GN=PPIB PE=1 SV=2)

HSP 1 Score: 192.2 bits (487), Expect = 5.702e-48
Identity = 98/179 (54.75%), Postives = 117/179 (65.36%), Query Frame = 3
Query:   60 LPLTMLWAIVLFATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRIVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA 596
            L   ++   V F       A    +   ++T KVYFD+ I  +  GR++ GLFGK VPKT +NF AL TGEKG G       YK S FHR+I  FM+Q            +SIYGE+FPDENFKLKH GPG +SMANAG DTNGSQFFITTV T+WLDG+HVVFGKVL GM+VV KVE+
Sbjct:   13 LAAALIAGSVFFLLLPGPSAADEKKKGPKVTVKVYFDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFG-------YKNSKFHRVIKDFMIQGGDFTRGDGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVES 184          
The following BLAST results are available for this feature:
BLAST of DY270430 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 221
Match NameE-valueIdentityDescription
PPIB_RAT5.157e-4964.67Peptidyl-prolyl cis-trans isomerase B OS=Rattus no... [more]
PPIB_CHICK5.157e-4960.87Peptidyl-prolyl cis-trans isomerase B OS=Gallus ga... [more]
PPIB_MOUSE6.735e-4964.24Peptidyl-prolyl cis-trans isomerase B OS=Mus muscu... [more]
PPID_RHIOR1.500e-4868.49Peptidyl-prolyl cis-trans isomerase D OS=Rhizopus ... [more]
PPIF_RAT1.960e-4860.13Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_BOVIN1.960e-4854.26Peptidyl-prolyl cis-trans isomerase B OS=Bos tauru... [more]
CYPH_YEAST1.960e-4860.00Peptidyl-prolyl cis-trans isomerase OS=Saccharomyc... [more]
CP20B_ARATH1.960e-4858.68Peptidyl-prolyl cis-trans isomerase CYP20-2, chlor... [more]
PPIF_MOUSE2.559e-4860.13Peptidyl-prolyl cis-trans isomerase, mitochondrial... [more]
PPIB_HUMAN5.702e-4854.75Peptidyl-prolyl cis-trans isomerase B OS=Homo sapi... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YJ11FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270430 ID=DY270430; Name=DY270430; organism=Citrus clementina; type=EST; length=1294bp
CAAAGTGAGTGACTTCGAAACGAGAAACAACGAAGTGATACATGGCTTCG
ACAAAATTTCTTCCACTCACGATGCTATGGGCTATTGTCCTGTTTGCCAC
TTTCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCA
CAAACAAAGTTTACTTTGACGTTGAGATTGCTGGAAAACCTGCCGGACGT
ATTGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTT
CCGAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGCGGGAAGCCAC
TCCACTACAAGGGAAGTACGTTCCATAGGATTATTCCCAGCTTTATGCTT
CAAGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTA
TGGAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACTGGCCCAG
GGCTTTTGTCAATGGCAAATGCTGGTCCAGACACCAATGGTTCACAATTC
TTCATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATT
TGGAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAG
GGAGGCAGAATGGCACTCCCAAGAGCAAAGTCCGTCATTGCAGACAGCGG
TGAACTTCCTCTGTGATTTCCCCCATAATTAAATAATTACGCTATACACC
TTTTTAGTCCTCTTGTCTTTTCAACCTTCTGGAAAAAACTCCATAATTTG
CCCTATTTACCATGGAAAAACATTTTAAATCGTTCTTCGTTGTCTGCAAT
CCCGGTGCGTCATTTGACAGGGATCATTTTCTCTGAAAAGTAATACAATA
CTTTTAGAGGTTGCATATCGAACTGTGGAAAAATAACCAAATGGAATCCC
ACCCAACAACCTTCCAAACTCAGAAATACCTCCTCAAATTATAAAATACT
AACCATCCTCCACTCTTGCTCAAATTACTTTGTATACGCAAACGCAACTC
CTTTAATACATTTTTCCGCACGAGTTGTGGTTAGAAGCCGACACAAAACG
ATACTGATCACTACCCCATCCTGCTCTACACCCTACCCACACCTTTTTTC
TGTTACTTAAGTGTCTTTGTCCTGCGTTGTCGCTTCTCTTCGTTACTATC
GCCGTATCCCTCAGTCAATCGACCCTACTAATGAAAAGAGTACATACACT
AATAATAAACTACGATCCTCAAATCCACGCTTTGAAGTGATCACGTTATA
AATATCATCAACCTAGCAATTACTAATGTGCAATGGCCTATTAG
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