DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNE (FK506-binding protein 1 OS=Cryptococcus neoformans GN=FPR1 PE=3 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 1.599e-24
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HY GTLLDG++FDSSRDR TPF   +GQG VI+GWD G+  +  G+ A     P+ AYG  G PP IPPN+TL+F+VELL
Sbjct:   17 PQPGDSVTIHYVGTLLDGSKFDSSRDRGTPFVCRIGQGQVIRGWDEGVPQLSIGQKANLICTPDYAYGARGFPPVIPPNSTLKFEVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_SAGOE (FK506-binding protein 5 OS=Saguinus oedipus GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 4.651e-24
Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD+V VHY G L +G +FDSS DR+ PF F++G+G VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F+VELL++
Sbjct:   45 ETPMIGDKVYVHYNGKLSNGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLNF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_PONAB (FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 6.075e-24
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD+V VHY G L +G +FDSS DR+ PF F+LG+G VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F++ELL +
Sbjct:   45 ETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_HUMAN (FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 6.075e-24
Identity = 54/93 (58.06%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD+V VHY G L +G +FDSS DR+ PF F+LG+G VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F++ELL +
Sbjct:   45 ETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSLPKIPSNATLFFEIELLDF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 7.934e-24
Identity = 54/93 (58.06%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD V VHY G L +G +FDSS DR+ PF F++G+G VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F+VELL +
Sbjct:   45 ETPMIGDRVYVHYNGKLANGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEVELLDF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_YARLI (FK506-binding protein 1 OS=Yarrowia lipolytica GN=FPR1 PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.036e-23
Identity = 52/89 (58.43%), Postives = 63/89 (70.79%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HY GTL +G +FDSSRDR  PFK T+G G+VI+GWD G+  +  GE +V TI  +  YGE G P  IPPNATL FDVELL
Sbjct:   17 PKKGDAVTIHYVGTLENGQKFDSSRDRGEPFKTTIGVGDVIRGWDEGVPKLSLGERSVLTISGDYGYGERGFPGLIPPNATLVFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_AOTNA (FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP5 PE=2 SV=2)

HSP 1 Score: 111.309 bits (277), Expect = 1.036e-23
Identity = 53/93 (56.99%), Postives = 66/93 (70.97%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD+V VHY G L +G +FDSS DR+ PF F++G+G VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F++ELL +
Sbjct:   45 ETPMIGDKVYVHYNGKLSNGKKFDSSHDRNEPFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPKIPSNATLFFEIELLDF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_ASPFU (FK506-binding protein 1A OS=Aspergillus fumigatus GN=fpr1A PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.768e-23
Identity = 52/91 (57.14%), Postives = 63/91 (69.23%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            D P+ GD V +HYTG L DG++FDSS DR+ PF+  +G G VIKGWD G+  M  GE AV TI P+  YG  G PP IP N+TL F+VELL
Sbjct:   15 DFPKKGDFVTIHYTGRLTDGSKFDSSVDRNEPFQTQIGTGRVIKGWDEGVPQMSLGEKAVLTITPDYGYGARGFPPVIPGNSTLIFEVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_BOVIN (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos taurus GN=FKBP1A PE=1 SV=2)

HSP 1 Score: 109.383 bits (272), Expect = 3.938e-23
Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ G    VHYTG L DG +FDSSRDR+ PFKF LG+  VI+GW+ G+  M  G+ A  TI P+ AYG +G P  IPPNATL FDVELL
Sbjct:   17 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_MOUSE (FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 5.143e-23
Identity = 53/93 (56.99%), Postives = 62/93 (66.67%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            + P  GD+V VHY G L DG +FDSS DR  PF F+LGQG VIK WDIG+ TMKKGE       PE AYG +G    IP NATL F++ELL +
Sbjct:   45 EAPMFGDKVYVHYKGMLSDGKKFDSSHDRKKPFAFSLGQGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGSAGHLQKIPSNATLFFEIELLDF 137          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKBP_CRYNE1.599e-2457.30FK506-binding protein 1 OS=Cryptococcus neoformans... [more]
FKBP5_SAGOE4.651e-2458.06FK506-binding protein 5 OS=Saguinus oedipus GN=FKB... [more]
FKBP5_PONAB6.075e-2458.06FK506-binding protein 5 OS=Pongo abelii GN=FKBP5 P... [more]
FKBP5_HUMAN6.075e-2458.06FK506-binding protein 5 OS=Homo sapiens GN=FKBP5 P... [more]
FKBP5_SAIBB7.934e-2458.06FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]
FKBP_YARLI1.036e-2358.43FK506-binding protein 1 OS=Yarrowia lipolytica GN=... [more]
FKBP5_AOTNA1.036e-2356.99FK506-binding protein 5 OS=Aotus nancymaae GN=FKBP... [more]
FKB1A_ASPFU1.768e-2357.14FK506-binding protein 1A OS=Aspergillus fumigatus ... [more]
FKB1A_BOVIN3.938e-2358.43Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Bos ... [more]
FKBP5_MOUSE5.143e-2356.99FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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