DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP3_YARLI (FK506-binding protein 3 OS=Yarrowia lipolytica GN=FPR3 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.443e-14
Identity = 42/88 (47.73%), Postives = 60/88 (68.18%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMK-KGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            G +V V Y G L +G  FDS+  +  PF F++G+G VI+GWDIG++ MK KGE  +  IPP +AYG+    P IPPN+ L FDV++++
Sbjct:  321 GSKVGVRYVGKLANGKVFDSN-SKGKPFYFSVGKGEVIRGWDIGVQGMKVKGERRII-IPPGMAYGKQ-KLPGIPPNSQLTFDVKVVN 405          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPOR (FK506-binding protein 4 OS=Aspergillus oryzae GN=fpr4 PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 9.721e-14
Identity = 42/86 (48.84%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            G+ V + Y G L DG  FD+++ +  PF F LG+G VIKGWDIG+  M  G     +IPP LAYG+  + P IP N+ L FDV+LL
Sbjct:  384 GNTVAMRYIGKLEDGKVFDANK-KGKPFTFKLGKGEVIKGWDIGVAGMAVGGERRISIPPHLAYGKK-ALPGIPGNSKLIFDVKLL 467          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_RHIOR (FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP5 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.658e-13
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQ-FDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            PE  + V VHY   LLD ++ FDSSRDR+T F F L    VI+ W++ I TM+ GE A      +  YG+ G    +PP A L+F+VEL+ +
Sbjct:   23 PEPTNFVSVHYDAYLLDTSEKFDSSRDRNTEFTFQLRDSKVIEAWELAIPTMQVGELAEIICTSDYGYGDQGRQYIVPPRAQLRFEVELIGF 114          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis GN=FPR4 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 3.694e-13
Identity = 41/86 (47.67%), Postives = 51/86 (59.30%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            G +V + Y G L +G  FD       PF F LG+G VIKGWD G+K M+ G     T PP+LAYG     P IP N+TL FDV+L+
Sbjct:  289 GQKVGMRYVGKLTNGKVFDQCTS-GKPFYFKLGKGEVIKGWDEGVKGMRVGAERRLTCPPKLAYGNQ-KIPGIPANSTLVFDVKLV 372          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB11_BOVIN (FK506-binding protein 11 OS=Bos taurus GN=FKBP11 PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 4.825e-13
Identity = 40/87 (45.98%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            GD + +HY+G+L+DG  FD+S  R  P    LGQ  VI G +  +  M  GE     IP  LAYG+ G PP+IP +A L FDVEL++
Sbjct:   59 GDTLHIHYSGSLVDGRIFDTSLTRD-PLVIELGQKQVIPGLEQSLLDMCVGEKRRVIIPSHLAYGKRGFPPSIPADAELHFDVELIA 144          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1B_EMENI (FK506-binding protein 1B OS=Emericella nidulans GN=fpr1B PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 8.229e-13
Identity = 41/94 (43.62%), Postives = 53/94 (56.38%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLD----------GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATL 540
            D+P  GD V + YTG L D          GTQFD+S+ R  P K  +G G VI GWD G++ M  GE A+ TI  +  YG+ G P  IPP++ L
Sbjct:   19 DSPHTGDTVIIDYTGYLYDDTRGENEYFMGTQFDTSQGRG-PLKTEIGVGKVILGWDKGVQQMTLGEKAILTISSDNGYGKRGFPGLIPPDSGL 111          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB11_MOUSE (FK506-binding protein 11 OS=Mus musculus GN=Fkbp11 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 8.229e-13
Identity = 39/87 (44.83%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            GD + +HYTG+L+DG   D+S  R  P    LGQ  VI G +  +  M  GE     IP  LAYG+ G PP+IP +A +Q+DVEL++
Sbjct:   57 GDTLHIHYTGSLVDGRIIDTSLTRD-PLVIELGQKQVIPGLEQSLLDMCVGEKRRAVIPSHLAYGKRGYPPSIPADAVVQYDVELIA 142          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_CRYNE (FK506-binding protein 4 OS=Cryptococcus neoformans GN=FPR4 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 1.075e-12
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            + G  + + Y G L +G QFD++     PF F LG+G VI+GWD G+  M  G     TIP  LAYG     P IP N+TL+FDV+L+S
Sbjct:  317 KTGKRLGMRYIGKLTNGKQFDANTS-GKPFSFVLGKGEVIRGWDEGLAGMAVGGERRLTIPAALAYGNQ-KIPGIPKNSTLKFDVKLVS 403          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB11_HUMAN (FK506-binding protein 11 OS=Homo sapiens GN=FKBP11 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.404e-12
Identity = 38/87 (43.68%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            GD + +HYTG+L+DG   D+S  R  P    LGQ  VI G +  +  M  GE     IP  LAYG+ G PP++P +A +Q+DVEL++
Sbjct:   57 GDTLHIHYTGSLVDGRIIDTSLTRD-PLVIELGQKQVIPGLEQSLLDMCVGEKRRAIIPSHLAYGKRGFPPSVPADAVVQYDVELIA 142          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP7_MOUSE (FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.833e-12
Identity = 45/97 (46.39%), Postives = 55/97 (56.70%), Query Frame = 1
Query:  292 TPENGDEVEVHYTGTLL-DGTQFDSSR--DRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESG-SPPTIPPNATLQFDVELLSWT 570
            T   GD +  HY G L  DG++F  SR  D   P  F LG G+VIKG DI +  M  GE     IPP  AYG+ G +   IPPNATL F++EL + T
Sbjct:   45 TSRKGDLLNAHYDGYLAKDGSKFYCSRTQDEGHPKWFVLGVGHVIKGLDIAMMDMCPGEKRKVIIPPSFAYGKEGYAEGKIPPNATLMFEIELYAVT 141          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKBP3_YARLI7.443e-1447.73FK506-binding protein 3 OS=Yarrowia lipolytica GN=... [more]
FKBP4_ASPOR9.721e-1448.84FK506-binding protein 4 OS=Aspergillus oryzae GN=f... [more]
FKBP5_RHIOR1.658e-1343.48FK506-binding protein 5 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP4_USTMA3.694e-1347.67FK506-binding protein 4 OS=Ustilago maydis GN=FPR4... [more]
FKB11_BOVIN4.825e-1345.98FK506-binding protein 11 OS=Bos taurus GN=FKBP11 P... [more]
FKB1B_EMENI8.229e-1343.62FK506-binding protein 1B OS=Emericella nidulans GN... [more]
FKB11_MOUSE8.229e-1344.83FK506-binding protein 11 OS=Mus musculus GN=Fkbp11... [more]
FKBP4_CRYNE1.075e-1244.94FK506-binding protein 4 OS=Cryptococcus neoformans... [more]
FKB11_HUMAN1.404e-1243.68FK506-binding protein 11 OS=Homo sapiens GN=FKBP11... [more]
FKBP7_MOUSE1.833e-1246.39FK506-binding protein 7 OS=Mus musculus GN=Fkbp7 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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