DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY270443_ssr95 microsatellite DY270443_ssr95:95..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3624 contig Ccv1_Contig3624:1..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_YEAST (FK506-binding protein 1 OS=Saccharomyces cerevisiae GN=FPR1 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 6.717e-23
Identity = 52/89 (58.43%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HYTGTL +G +FDSS DR +PF+  +G G VIKGWD+GI  +  GE A  TIP   AYG  G P  IPPN+TL FDVELL
Sbjct:   23 PKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNSTLVFDVELL 111          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP5_CERAE (FK506-binding protein 5 OS=Cercopithecus aethiops GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 8.772e-23
Identity = 52/93 (55.91%), Postives = 65/93 (69.89%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            +TP  GD+V VHY G L +G +F+SS DR+ PF F+LG+  VIK WDIG+ TMKKGE       PE AYG +GS P IP NATL F++ELL +
Sbjct:   45 ETPMIGDKVYVHYKGKLSNGKKFNSSHDRNEPFVFSLGKSQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSVPKIPSNATLFFEIELLDF 137          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_SCHPO (FK506-binding protein OS=Schizosaccharomyces pombe GN=SPBC839.17c PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.146e-22
Identity = 50/92 (54.35%), Postives = 63/92 (68.48%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            D P+ GD + +HYTGTL +G +FDSS DR +PF  T+G G +I+GWD G+  M  GE A  TI P+  YG  G P  IPPN+TL FDVELL+
Sbjct:   15 DFPKPGDRITMHYTGTLTNGKKFDSSVDRGSPFVCTIGVGQLIRGWDEGVPKMSLGEKAKLTITPDYGYGPRGFPGLIPPNSTLLFDVELLA 106          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_CANGA (FK506-binding protein 1 OS=Candida glabrata GN=FPR1 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.146e-22
Identity = 53/89 (59.55%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HYTGTL +G +FDSS DR +PF+  +G G VIKGWD GI  +  GE A  TIP   AYG  G P  IPPNATL FDVELL
Sbjct:   23 PKQGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDAGIPKLSVGEKARLTIPGPYAYGPRGFPGLIPPNATLIFDVELL 111          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_CRYNE (FK506-binding protein 2 OS=Cryptococcus neoformans GN=FPR2 PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.146e-22
Identity = 53/87 (60.92%), Postives = 62/87 (71.26%), Query Frame = 1
Query:  304 GDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD + +HYTGTL  DG++FDSS DR+ PF+FTLG G VIKGWD G+  M   E    TIP  LAYGE G PP IPP +TL F+VELL
Sbjct:   45 GDRLSMHYTGTLAKDGSKFDSSLDRNRPFEFTLGAGQVIKGWDQGLLDMCISEKRKLTIPSHLAYGERGHPPVIPPQSTLVFEVELL 131          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_EMENI (FK506-binding protein 1A OS=Emericella nidulans GN=fprA PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.146e-22
Identity = 51/89 (57.30%), Postives = 60/89 (67.42%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ GD V +HYTGTL DG++FDSSRDR   F   +G G VIKGWD G+  +  GE A     P+ AYG  G PP IPPNATL F+VELL
Sbjct:   17 PKPGDTVSIHYTGTLADGSKFDSSRDRPGTFVTQIGVGRVIKGWDEGVLQLSVGEKAKLICTPDYAYGARGFPPVIPPNATLTFEVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_RAT (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Rattus norvegicus GN=Fkbp1a PE=2 SV=3)

HSP 1 Score: 107.457 bits (267), Expect = 1.496e-22
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ G    VHYTG L DG +FDSSRDR+ PFKFTLG+  VI+GW+ G+  M  G+ A   I P+ AYG +G P  IPP+ATL FDVELL
Sbjct:   17 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFTLGKQEVIRGWEEGVAQMSVGQRAKLIISPDYAYGATGHPGIIPPHATLVFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_RABIT (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Oryctolagus cuniculus GN=FKBP1A PE=3 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.496e-22
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ G    VHYTG L DG +FDSSRDR+ PFKF LG+  VI+GW+ G+  M  G+ A  TI P+ AYG +G P  IPP+ATL FDVELL
Sbjct:   17 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_HUMAN (Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo sapiens GN=FKBP1A PE=1 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 1.496e-22
Identity = 51/89 (57.30%), Postives = 62/89 (69.66%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            P+ G    VHYTG L DG +FDSSRDR+ PFKF LG+  VI+GW+ G+  M  G+ A  TI P+ AYG +G P  IPP+ATL FDVELL
Sbjct:   17 PKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_DEBHA (FK506-binding protein 1 OS=Debaryomyces hansenii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.954e-22
Identity = 52/90 (57.78%), Postives = 62/90 (68.89%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            P+ GD V +HYTGTL +G +FDSSRDR  PF+ T+G G VI GWD GI  +  G  A  +IP   AYG+ G P  IPPNATL FDVELL+
Sbjct:   21 PKPGDLVTIHYTGTLENGKKFDSSRDRGKPFQCTIGVGQVIVGWDTGIPKLSVGSRAKLSIPGHEAYGDRGFPGLIPPNATLLFDVELLN 110          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKBP_YEAST6.717e-2358.43FK506-binding protein 1 OS=Saccharomyces cerevisia... [more]
FKBP5_CERAE8.772e-2355.91FK506-binding protein 5 OS=Cercopithecus aethiops ... [more]
FKBP_SCHPO1.146e-2254.35FK506-binding protein OS=Schizosaccharomyces pombe... [more]
FKBP_CANGA1.146e-2259.55FK506-binding protein 1 OS=Candida glabrata GN=FPR... [more]
FKBP2_CRYNE1.146e-2260.92FK506-binding protein 2 OS=Cryptococcus neoformans... [more]
FKB1A_EMENI1.146e-2257.30FK506-binding protein 1A OS=Emericella nidulans GN... [more]
FKB1A_RAT1.496e-2257.30Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Ratt... [more]
FKB1A_RABIT1.496e-2257.30Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Oryc... [more]
FKB1A_HUMAN1.496e-2257.30Peptidyl-prolyl cis-trans isomerase FKBP1A OS=Homo... [more]
FKBP_DEBHA1.954e-2257.78FK506-binding protein 1 OS=Debaryomyces hansenii G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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