DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY270443_ssr95 microsatellite DY270443_ssr95:95..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3624 contig Ccv1_Contig3624:1..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_YEAST (FK506-binding protein 2 OS=Saccharomyces cerevisiae GN=FKB2 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.322e-20
Identity = 51/87 (58.62%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD+V+VHYTG+LL+ GT FDSS  R +P  F LG G VIKGWD G+  M  GE     IP  LAYGE G P  IPP+A L FDVEL+
Sbjct:   43 GDKVKVHYTGSLLESGTVFDSSYSRGSPIAFELGVGRVIKGWDQGVAGMCVGEKRKLQIPSSLAYGERGVPGVIPPSADLVFDVELV 129          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_YARLI (FK506-binding protein 2 OS=Yarrowia lipolytica GN=FPR2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.322e-20
Identity = 50/87 (57.47%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            GD V VHYTG L DGT FDSS +R  P +F LG G VI GWD GI  M  GE    TIPP LAYG+ G+   IPP++TL F  EL+S
Sbjct:   48 GDTVSVHYTGKLEDGTVFDSSVERGQPIQFPLGTGRVIPGWDQGILGMCVGEKRKLTIPPHLAYGKQGAGRVIPPDSTLIFTTELVS 134          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_EMENI (FK506-binding protein 2 OS=Emericella nidulans GN=fkbB PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.951e-20
Identity = 52/87 (59.77%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  304 GDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V++HY GTL  DG+QFD+S DR TPFKF LG G VIKGWD G+  M  GE    TIPPE  YG+ G  P IP  ATL F  ELL
Sbjct:   40 GDTVKMHYRGTLAEDGSQFDASYDRGTPFKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGDRGIGP-IPGGATLIFQTELL 125          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B GN=fbp PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.078e-20
Identity = 49/86 (56.98%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            G E+ VHYTG L +GT+FDSS DR  P   TLG G VIKGWD G   MK+G     TIP E+ YG  G+   IPP+ATL F+VELL
Sbjct:   20 GKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHGAGGVIPPHATLIFEVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMA (FK506-binding protein OS=Neisseria meningitidis serogroup A GN=fbp PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 9.078e-20
Identity = 49/86 (56.98%), Postives = 57/86 (66.28%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            G E+ VHYTG L +GT+FDSS DR  P   TLG G VIKGWD G   MK+G     TIP E+ YG  G+   IPP+ATL F+VELL
Sbjct:   20 GKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGARGAGGVIPPHATLIFEVELL 105          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP_CANAL (FK506-binding protein 1 OS=Candida albicans GN=RBP1 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 9.078e-20
Identity = 50/97 (51.55%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKT-----------MKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V +HY G L +G +FDSSR R  PF  T+G G VIKGWDI +             + KG  A+ TIPP LAYG  G PP I PN TL F+VELL
Sbjct:   23 GDTVTIHYDGKLTNGKEFDSSRKRGKPFTCTVGVGQVIKGWDISLTNNYGKGGANLPKISKGTKAILTIPPNLAYGPRGIPPIIGPNETLVFEVELL 119          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1B_ASPFU (FK506-binding protein 1B OS=Aspergillus fumigatus GN=fpr1B PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.186e-19
Identity = 51/99 (51.52%), Postives = 65/99 (65.66%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLD--------GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            D P+ GD VE++YTG L D        G +FDSS+ R  P K T+G G+VI+GWD G++ M  GE A+ T+  E AYGE G P  IPPNA+L F+VELL
Sbjct:   15 DHPQPGDPVELNYTGYLYDESNPDHHKGKEFDSSKRRG-PLKATIGAGDVIRGWDEGVRQMSLGEKAILTMSGEYAYGEKGFPGLIPPNASLVFEVELL 112          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB21_ARATH (FK506-binding protein 2-1 OS=Arabidopsis thaliana GN=FKBP15-1 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 4.505e-19
Identity = 46/87 (52.87%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            GD+++VHY G L DGT FDSS +R  P +F LG G VI GWD G+     GE     IP +L YG++GSPP IP  ATL FD EL++
Sbjct:   52 GDKIKVHYRGKLTDGTVFDSSFERGDPIEFELGTGQVIPGWDQGLLGACVGEKRKLKIPSKLGYGDNGSPPKIPGGATLIFDTELVA 138          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBY_HAEIN (Probable FKBP-type peptidyl-prolyl cis-trans isomerase OS=Haemophilus influenzae GN=HI0574 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.311e-18
Identity = 49/91 (53.85%), Postives = 62/91 (68.13%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            DT ++ D V+VHYTG L +G  FDSS +R  P +F L Q  VIKGW  G++ +KKG    F I PEL YGE G+  +IPPN+TL FDVE+L
Sbjct:  145 DTIKSTDTVKVHYTGKLPNGKVFDSSVERGQPVEFQLDQ--VIKGWTEGLQLVKKGGKIQFVIAPELGYGEQGAGASIPPNSTLIFDVEVL 233          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB1A_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neurospora crassa GN=fkr-2 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.311e-18
Identity = 46/86 (53.49%), Postives = 54/86 (62.79%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V+VHY G L  G +FD+S DR  P  FT+GQG VIKGWD G+  MK GE    TI P LAYG       IP N+TL F+ EL+
Sbjct:   26 GDNVDVHYKGVLTSGKKFDASYDRGEPLNFTVGQGQVIKGWDEGLLGMKIGEKRKLTIAPHLAYGNRAVGGIIPANSTLIFETELV 111          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKBP2_YEAST5.322e-2058.62FK506-binding protein 2 OS=Saccharomyces cerevisia... [more]
FKBP2_YARLI5.322e-2057.47FK506-binding protein 2 OS=Yarrowia lipolytica GN=... [more]
FKBP2_EMENI6.951e-2059.77FK506-binding protein 2 OS=Emericella nidulans GN=... [more]
FKBP_NEIMB9.078e-2056.98FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP_NEIMA9.078e-2056.98FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP_CANAL9.078e-2051.55FK506-binding protein 1 OS=Candida albicans GN=RBP... [more]
FKB1B_ASPFU1.186e-1951.52FK506-binding protein 1B OS=Aspergillus fumigatus ... [more]
FKB21_ARATH4.505e-1952.87FK506-binding protein 2-1 OS=Arabidopsis thaliana ... [more]
FKBY_HAEIN1.311e-1853.85Probable FKBP-type peptidyl-prolyl cis-trans isome... [more]
FKB1A_NEUCR1.311e-1853.49Peptidyl-prolyl cis-trans isomerase fkr-2 OS=Neuro... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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