DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_RHIOR (FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP4 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.712e-18
Identity = 48/89 (53.93%), Postives = 57/89 (64.04%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            +NG  V + Y G L +G  FD +     PF F LG+G VIKGWD+GI  MK G     TIP  LAYG+ G+PP IP NATL FDV+LLS
Sbjct:  293 KNGQRVGMRYIGKLTNGKVFDKNVS-GKPFSFLLGRGEVIKGWDLGIAGMKAGGERKLTIPAPLAYGKRGAPPDIPKNATLVFDVKLLS 380          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_CANGA (FK506-binding protein 2 OS=Candida glabrata GN=FPR2 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.712e-18
Identity = 49/87 (56.32%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V VHYTG+L + G  FDSS  R+ P +F LG G VI GW+ GI  M  GE     IPPELAYG  G+   IPPNA L FDVEL+
Sbjct:   45 GDMVSVHYTGSLAENGKVFDSSLRRNEPIQFKLGAGQVIAGWEQGITGMCLGEKRTLHIPPELAYGSRGAGGVIPPNAVLDFDVELV 131          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBA_ECOLI (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli (strain K12) GN=fkpA PE=1 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.981e-18
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + P++ D V V+Y GTL+DG +FD+S  R  P  F L    VI GW  G+K +KKG      IPPELAYG++G  P IPPN+TL FDVELL
Sbjct:  159 EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELL 246          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBA_ECOL6 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O6 GN=fkpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.981e-18
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + P++ D V V+Y GTL+DG +FD+S  R  P  F L    VI GW  G+K +KKG      IPPELAYG++G  P IPPN+TL FDVELL
Sbjct:  159 EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELL 246          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBA_ECO57 (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Escherichia coli O157:H7 GN=fkpA PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 4.981e-18
Identity = 48/91 (52.75%), Postives = 60/91 (65.93%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + P++ D V V+Y GTL+DG +FD+S  R  P  F L    VI GW  G+K +KKG      IPPELAYG++G  P IPPN+TL FDVELL
Sbjct:  159 EAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLD--GVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAG-VPGIPPNSTLVFDVELL 246          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_ASPFU (FK506-binding protein 2 OS=Aspergillus fumigatus GN=fpr2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 6.505e-18
Identity = 49/87 (56.32%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  304 GDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V +HY GTL  DG++FDSS  R+ P KF LG G VIKGWD G+  M  GE    TIPPE  YGE G  P IP  ATL F+ EL+
Sbjct:   39 GDTVHMHYRGTLAADGSEFDSSYGRNQPLKFKLGAGRVIKGWDEGLLDMCVGEKRTLTIPPEYGYGERGIGP-IPGGATLIFETELV 124          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_GIBZE (FK506-binding protein 2 OS=Gibberella zeae GN=FPR2 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.893e-17
Identity = 47/89 (52.81%), Postives = 56/89 (62.92%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLD-GTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + GD V +HY GTL D G QFD+S DR TP  F +G G VIKGWD G+  M  GE  V TIPPE  YG+    P IP  +TL F+ EL+
Sbjct:   37 QKGDGVHMHYRGTLKDSGKQFDASYDRGTPLSFKVGAGQVIKGWDEGLLDMCIGEKRVLTIPPEFGYGQRAIGP-IPAGSTLVFETELV 124          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB39_DROME (39 kDa FK506-binding nuclear protein OS=Drosophila melanogaster GN=FK506-bp1 PE=1 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 3.229e-17
Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVEL 558
            + G  V V+Y G L    +   S  +  PFKF LG G VIKGWD+G+  MK G   V T PP +AYG  G+PP I PN+TL F+VEL
Sbjct:  267 KQGKRVSVYYIGRLQSNNKTFDSLLKGKPFKFALGGGEVIKGWDVGVAGMKVGGKRVITCPPHMAYGARGAPPKIGPNSTLVFEVEL 353          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP2_ASPOR (FK506-binding protein 2 OS=Aspergillus oryzae GN=fpr2 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 4.217e-17
Identity = 47/87 (54.02%), Postives = 57/87 (65.52%), Query Frame = 1
Query:  304 GDEVEVHYTGTLL-DGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V++HY GTL  DG++FDSS  R++P KF +G G VIKGWD G+  M  GE    TIPPE  YG  G  P IP  ATL F+ EL+
Sbjct:   39 GDTVQMHYKGTLQSDGSEFDSSYKRNSPLKFKVGSGMVIKGWDEGLLDMCIGEKRTLTIPPEYGYGSRGVGP-IPGGATLIFETELV 124          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP3_HUMAN (FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 7.193e-17
Identity = 47/97 (48.45%), Postives = 58/97 (59.79%), Query Frame = 1
Query:  295 PENGDEVEVHYTGTLLDGTQFDSS-------RDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPT-IPPNATLQFDVELL 561
            P+ GD V   YTGTL DGT FD++       +  + P  F +G G VI+GWD  + TM KGE A   I PE AYG+ G P   IPPNA L F+VEL+
Sbjct:  125 PKKGDVVHCWYTGTLQDGTVFDTNIQTSAKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLTFEVELV 221          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKBP4_RHIOR1.712e-1853.93FK506-binding protein 4 OS=Rhizopus oryzae GN=FKBP... [more]
FKBP2_CANGA1.712e-1856.32FK506-binding protein 2 OS=Candida glabrata GN=FPR... [more]
FKBA_ECOLI4.981e-1852.75FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECOL64.981e-1852.75FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBA_ECO574.981e-1852.75FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP2_ASPFU6.505e-1856.32FK506-binding protein 2 OS=Aspergillus fumigatus G... [more]
FKBP2_GIBZE1.893e-1752.81FK506-binding protein 2 OS=Gibberella zeae GN=FPR2... [more]
FKB39_DROME3.229e-1749.4339 kDa FK506-binding nuclear protein OS=Drosophila... [more]
FKBP2_ASPOR4.217e-1754.02FK506-binding protein 2 OS=Aspergillus oryzae GN=f... [more]
FKBP3_HUMAN7.193e-1748.45FK506-binding protein 3 OS=Homo sapiens GN=FKBP3 P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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