DY270443

Overview
NameDY270443
Unique NameDY270443
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1101
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DY270443_ssr95 microsatellite DY270443_ssr95:95..116. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3624 contig Ccv1_Contig3624:1..1102. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB10_BOVIN (FK506-binding protein 10 OS=Bos taurus GN=FKBP10 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.148e-14
Identity = 40/88 (45.45%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            GD +  HY G+L+DGT FDSS  R+  +   +GQG +I G D G++    GE    TIPP LAYGE+G+   IP +A L FDV ++ +
Sbjct:  287 GDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYVGQGYIIPGMDQGLQGSCMGERRRITIPPHLAYGENGTGDKIPGSAVLIFDVHVIDF 374          

HSP 2 Score: 77.0258 bits (188), Expect = 2.166e-13
Identity = 41/86 (47.67%), Postives = 47/86 (54.65%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V  HY GT  DG +FDSS DR T     +G G +I G D G+  M   E     +PP L YG  G    IPP+ATL FDV LL
Sbjct:   63 GDFVRYHYNGTFEDGKKFDSSYDRHTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGVAGLIPPDATLYFDVVLL 148          

HSP 3 Score: 76.2554 bits (186), Expect = 3.694e-13
Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            +T + GD V  HY  +LLDGT+  SS D   P + TLG   VI+G D G++ M  GE     +PP LA+GESG+   +P +A L F+VEL+S
Sbjct:  395 ETAKLGDFVHYHYNCSLLDGTRLFSSHDYGAPQEATLGAHKVIEGLDTGLQGMCVGERRQLVVPPHLAHGESGA-RGVPGSAVLLFEVELVS 485          

HSP 4 Score: 74.7146 bits (182), Expect = 1.075e-12
Identity = 40/88 (45.45%), Postives = 50/88 (56.82%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            ++ D V  HY GTLLDGT FD+S  +   +   +G G +IKG D G+  M  GE     IPP LAYGE G    IP  A+L F V L+
Sbjct:  173 QDSDFVRYHYNGTLLDGTAFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIVIPPFLAYGEKGYGTVIPSQASLVFHVLLI 260          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPFU (FK506-binding protein 4 OS=Aspergillus fumigatus GN=fpr4 PE=3 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.959e-14
Identity = 44/86 (51.16%), Postives = 55/86 (63.95%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            G+ V + Y G L DG  FD+++ +  PF F LG+G VIKGWDIGI  M  G     TIPP LAYG+  + P IP N+ L FDV+LL
Sbjct:  403 GNTVAMRYIGKLEDGKVFDANK-KGKPFTFKLGKGEVIKGWDIGIAGMAVGGERRITIPPHLAYGKK-ALPGIPANSKLIFDVKLL 486          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB10_MOUSE (FK506-binding protein 10 OS=Mus musculus GN=Fkbp10 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.959e-14
Identity = 44/88 (50.00%), Postives = 51/88 (57.95%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            +N D V  HY GTLLDGT FD+S  R   +   +G G +IKG D G+  M  GE     IPP LAYGE G    IPP A+L F V LL
Sbjct:  171 QNSDFVRYHYNGTLLDGTGFDNSYSRGGTYDTYIGSGWLIKGMDQGLLGMCPGEKRKIIIPPFLAYGEKGYGTVIPPQASLVFYVLLL 258          

HSP 2 Score: 80.1073 bits (196), Expect = 2.558e-14
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            GD +  HY G+L+DGT FDSS  R+  +   +GQG +I G D G++    GE    T+PP LAYGE+G+   IP +A L FDV ++ +
Sbjct:  285 GDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYVGQGYIIPGMDQGLQGACIGERRRITVPPHLAYGENGTGDKIPGSAVLIFDVHVIDF 372          

HSP 3 Score: 78.9518 bits (193), Expect = 5.699e-14
Identity = 42/86 (48.84%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V  HY GT  DG +FDSS DRST     +G G +I G D G+  M   E     +PP L YG  G    IPP+ATL FDV LL
Sbjct:   61 GDFVRYHYNGTFEDGKKFDSSYDRSTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGVAGLIPPDATLYFDVVLL 146          

HSP 4 Score: 75.0998 bits (183), Expect = 8.229e-13
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            +T + GD +  HY  +LLDGT+  SS D   P + TLG   VI+G D G++ M  GE     +PP LA+GE+G+   +P +A L F+VEL+S
Sbjct:  393 ETSKIGDFIRYHYNCSLLDGTRLFSSHDYEAPQEITLGANKVIEGLDRGLQGMCVGERRQLIVPPHLAHGENGA-RGVPGSAVLLFEVELVS 483          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKB10_HUMAN (FK506-binding protein 10 OS=Homo sapiens GN=FKBP10 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 2.558e-14
Identity = 42/88 (47.73%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            ++GD V  HY GTLLDGT FD+S  +   +   +G G +IKG D G+  M  GE     IPP LAYGE G    IPP A+L F V L+
Sbjct:  172 QDGDFVRYHYNGTLLDGTSFDTSYSKGGTYDTYVGSGWLIKGMDQGLLGMCPGERRKIIIPPFLAYGEKGYGTVIPPQASLVFHVLLI 259          

HSP 2 Score: 79.7221 bits (195), Expect = 3.341e-14
Identity = 39/88 (44.32%), Postives = 55/88 (62.50%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            GD +  HY G+L+DGT FDSS  R+  +   +GQG +I G D G++    GE    TIPP LAYGE+G+   IP +A L F+V ++ +
Sbjct:  286 GDFMRYHYNGSLMDGTLFDSSYSRNHTYNTYIGQGYIIPGMDQGLQGACMGERRRITIPPHLAYGENGTGDKIPGSAVLIFNVHVIDF 373          

HSP 3 Score: 77.7962 bits (190), Expect = 1.270e-13
Identity = 41/86 (47.67%), Postives = 48/86 (55.81%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            GD V  HY GT  DG +FDSS DR+T     +G G +I G D G+  M   E     +PP L YG  G    IPP+ATL FDV LL
Sbjct:   62 GDFVRYHYNGTFEDGKKFDSSYDRNTLVAIVVGVGRLITGMDRGLMGMCVNERRRLIVPPHLGYGSIGLAGLIPPDATLYFDVVLL 147          

HSP 4 Score: 77.0258 bits (188), Expect = 2.166e-13
Identity = 42/92 (45.65%), Postives = 57/92 (61.96%), Query Frame = 1
Query:  289 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            +T + GD V  HY  +LLDGTQ  +S D   P + TLG   VI+G D G++ M  GE     +PP LA+GESG+   +P +A L F+VEL+S
Sbjct:  394 ETTKLGDFVRYHYNCSLLDGTQLFTSHDYGAPQEATLGANKVIEGLDTGLQGMCVGERRQLIVPPHLAHGESGA-RGVPGSAVLLFEVELVS 484          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP9_BOVIN (FK506-binding protein 9 OS=Bos taurus GN=FKBP9 PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.341e-14
Identity = 42/95 (44.21%), Postives = 53/95 (55.79%), Query Frame = 1
Query:  292 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS-WTS 573
            T  +GD V  HY GT  DG +FDSS DR + F   +G+G +I G D  +  M   E     IPP+LAYG  G    IPP++ L FDV L+  W S
Sbjct:   54 TVRSGDFVRYHYVGTFPDGQKFDSSYDRDSTFNVFVGKGQLIAGMDQALVGMCVNERRFVKIPPKLAYGSDGVSGVIPPDSVLHFDVLLMDIWNS 148          

HSP 2 Score: 79.7221 bits (195), Expect = 3.341e-14
Identity = 44/90 (48.89%), Postives = 52/90 (57.78%), Query Frame = 1
Query:  292 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            T +  D V  HY GT LDGT FDSS +R   +   +G G +I G D G+  M  GE  + TIPP LAYGE G    IP  A+L FDV LL
Sbjct:  166 TIQVSDFVRYHYNGTFLDGTLFDSSHNRMKTYDTYVGIGWLIPGMDKGLLGMCVGEKRIITIPPFLAYGEDGDGKDIPGQASLVFDVALL 255          

HSP 3 Score: 77.7962 bits (190), Expect = 1.270e-13
Identity = 37/88 (42.05%), Postives = 52/88 (59.09%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + GD ++ HY  +LLDGT  DS+ +    +   LG G V+ G D+G++ M  GE     IPP L YGE+G    +P +A L FD+ELL
Sbjct:  391 KKGDYLKYHYNASLLDGTLLDSTWNLGKTYNIVLGFGQVVLGMDMGLREMCVGEKRTVIIPPHLGYGEAGVDGEVPGSAVLVFDIELL 478          

HSP 4 Score: 75.485 bits (184), Expect = 6.301e-13
Identity = 40/90 (44.44%), Postives = 53/90 (58.89%), Query Frame = 1
Query:  298 ENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 567
            ++GD +  HY GTLLDGT FDSS  R+  F   +GQG VI G D G+  +  GE     +PP L YGE G    IP +A L FD+ ++ +
Sbjct:  280 QSGDFLRYHYNGTLLDGTFFDSSYSRNRTFDTYIGQGYVIPGIDEGLLGVCIGEKRRIVVPPHLGYGEEGR-GNIPGSAVLVFDIHVIDF 368          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBA_BUCBP (FKBP-type peptidyl-prolyl cis-trans isomerase fkpA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=fkpA PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.341e-14
Identity = 41/87 (47.13%), Postives = 58/87 (66.67%), Query Frame = 1
Query:  301 NGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            + D + VHY G+L++G +FD+S  R  P  F+L   +VI GW  G+K +KKG      IPP+LAYGE+G  P IP N+TL F++EL+
Sbjct:  163 DSDVITVHYKGSLINGNEFDNSYKRGQPLSFSLD--SVIPGWIEGLKYIKKGGLIKLVIPPKLAYGETG-VPGIPGNSTLIFEIELI 246          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_SPOFR (46 kDa FK506-binding nuclear protein OS=Spodoptera frugiperda GN=FKBP46 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 4.364e-14
Identity = 39/85 (45.88%), Postives = 48/85 (56.47%), Query Frame = 1
Query:  304 GDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVEL 558
            G  V V+Y G L    +   +  +   FKF LG   VI GWD+GI  MK G       PP +AYG  GSPP IPPN+TL F+V+L
Sbjct:  324 GKVVMVYYEGRLKQNNKMFDNCVKGPGFKFRLGSKEVISGWDVGIAGMKVGGKRKIVCPPAMAYGAKGSPPVIPPNSTLVFEVDL 408          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: MIP_COXBU (Peptidyl-prolyl cis-trans isomerase Mip OS=Coxiella burnetii GN=mip PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 7.443e-14
Identity = 43/91 (47.25%), Postives = 53/91 (58.24%), Query Frame = 1
Query:  292 TPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLS 564
            +P   DEV V+Y G L++GT FDSS  R  P  F L   +VIKGW   +  MK G      +PP+LAYGE G+P  I PN  L F V L+S
Sbjct:  138 SPTLNDEVTVNYEGRLINGTVFDSSYKRGQPATFPLK--SVIKGWQEALTRMKPGAIWEIYVPPQLAYGEQGAPGVIGPNEALIFKVNLIS 226          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_SCHPO (FK506-binding protein 39 kDa OS=Schizosaccharomyces pombe GN=fkbp39 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.443e-14
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 1
Query:  301 NGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            NG +VE+ Y G L +G  FD +  +  PF F LG+G VI+GWD+G+  M++G     TIP  +AYG   S P IP N+TL F+V+L+
Sbjct:  274 NGKKVEMRYIGKLENGKVFDKNT-KGKPFAFILGRGEVIRGWDVGVAGMQEGGERKITIPAPMAYGNQ-SIPGIPKNSTLVFEVKLV 358          
BLAST of DY270443 vs. ExPASy Swiss-Prot
Match: FKBP4_EMENI (FK506-binding protein 4 OS=Emericella nidulans GN=fpr4 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 7.443e-14
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 1
Query:  301 NGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 561
            +G+ V + Y G L +G  FDS++ +  PF F LG+G VIKGWDIG+  M  G     TIP  LAYG+ G  P IP N+ L FDV+LL
Sbjct:  391 SGNTVAMRYIGKLENGKVFDSNK-KGKPFTFKLGKGEVIKGWDIGVAGMAVGGERRITIPSHLAYGKKG-VPGIPGNSKLIFDVKLL 475          
The following BLAST results are available for this feature:
BLAST of DY270443 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
FKB10_BOVIN1.148e-1445.45FK506-binding protein 10 OS=Bos taurus GN=FKBP10 P... [more]
FKBP4_ASPFU1.959e-1451.16FK506-binding protein 4 OS=Aspergillus fumigatus G... [more]
FKB10_MOUSE1.959e-1450.00FK506-binding protein 10 OS=Mus musculus GN=Fkbp10... [more]
FKB10_HUMAN2.558e-1447.73FK506-binding protein 10 OS=Homo sapiens GN=FKBP10... [more]
FKBP9_BOVIN3.341e-1444.21FK506-binding protein 9 OS=Bos taurus GN=FKBP9 PE=... [more]
FKBA_BUCBP3.341e-1447.13FKBP-type peptidyl-prolyl cis-trans isomerase fkpA... [more]
FKBP4_SPOFR4.364e-1445.8846 kDa FK506-binding nuclear protein OS=Spodoptera... [more]
MIP_COXBU7.443e-1447.25Peptidyl-prolyl cis-trans isomerase Mip OS=Coxiell... [more]
FKBP4_SCHPO7.443e-1445.98FK506-binding protein 39 kDa OS=Schizosaccharomyce... [more]
FKBP4_EMENI7.443e-1449.43FK506-binding protein 4 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP6YK01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270443 ID=DY270443; Name=DY270443; organism=Citrus clementina; type=EST; length=1101bp
CACAACAATAAAAGAGAGAGCCCAACCCCCTTTGTCTCTCAGCCTATAGC
GGATATCACTGTCGCACGCATTTAGCATTTCACATAATCAGCAGCTCTCT
CTCTCTCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGAT
TTTGATATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGA
CGATGCTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAG
GTTTGAAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAA
AATGGCGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTAC
TCAGTTTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTG
GTCAAGGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAG
AAAGGTGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGA
ATCTGGTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATG
TTGAATTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGG
ATTATTAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAATCCCAGGAC
CTTGATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGG
TGTTGGAAAAGCAGATGGTGTAAAATTTCACGGTAAAGATGGTCATTTCT
GTCCCACTTTAACGAAAGGCTGAAAGAACAATGAAAAAGGGAAAAAAGGA
CCTTTTGGCGTGAAACCCCCAATTGGAATTGGGGGAAAAAGGAAATCGGC
CCCCGGGAACAAAGGGGCCTCCCCCCCAAAGGCAACCTTCCAATTGCGTT
TGGAATTATTTTCCGGGAAAAAGGGGTCCCAAAATCCCCGATAGAAAGAA
GGGGTTCTCCAAAAAATTTTAAAAAAAGGGGAAAGGGGTTTGAACCCCCC
ACGTGAAGGAACCTTTTTTTCCAAGTAAAATTATTATGGGAAAACCCCCC
CAAAATGGATCCCGGGTTTTTTTTACAAAAAAGGGCTTCCCAGCTGGAAA
A
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