DY270575

Overview
NameDY270575
Unique NameDY270575
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1151
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN13_ARATH (Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44550 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 3.301e-12
Identity = 47/140 (33.57%), Postives = 61/140 (43.57%), Query Frame = 2
Query:   83 NDHYCWMRPEDIDYDRPVTECSSC---SDXXXXXXXXXXXXXIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            +DH CWMRPED+   R      +    SD             I F   +KAY+  L+  AK LF F++  R  Y      A  FY S+ Y DE +W  AWL+ AT +  YL   T    G    VF         +WD+K
Sbjct:  151 SDHKCWMRPEDMTTPRTSYRIDAQHPGSDLAGETAAAMAAASIAFAPSDKAYANILIGHAKDLFAFAKAHRGLYQNSIPNAGGFYASSGYEDELLWAAAWLHRATNDQIYLDYLTEAETGGPRTVF---------AWDDK 281          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN5_ORYSJ (Endoglucanase 5 OS=Oryza sativa subsp. japonica GN=Os02g0151300 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.355e-12
Identity = 50/155 (32.26%), Postives = 67/155 (43.23%), Query Frame = 2
Query:   44 VGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSS---CSDXXXXXXXXXXXXXIVFK--DNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTS-YWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            VG GD+        DHYCW RPED+   R   +  +    S+             IVF+   +  Y+  L+H A+ LF+F  + R RY         +Y S+S Y DE +W   WL+ ATG   YL  A         G  W +   S  SWD K
Sbjct:  142 VGDGDS--------DHYCWQRPEDMTTSRHAYKVDAENPGSEVAAETAAAMAAASIVFRRAGDAHYAHLLLHHAQQLFEFGDKYRGRYDESVEVVKNYYPSSSGYKDELLWAALWLHRATGRREYLDYA-VDNADDFGGTGWAV---SEFSWDIK 284          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN4_ORYSJ (Endoglucanase 4 OS=Oryza sativa subsp. japonica GN=GLU14 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.355e-12
Identity = 47/140 (33.57%), Postives = 67/140 (47.86%), Query Frame = 2
Query:   86 DHYCWMRPEDIDYDRPV---TECSSCSDXXXXXXXXXXXXXIVFK-DNKAYSQKLVHGAKTLFQFSRQQRARYSAG-SAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            DH CW RPED+D  R V   T  S  SD             IVF+  + +YS KL+  A+ +F F+ + R  YS   S+    FY S SY DE +W  +WL+ A+     + L+    +G +        D+   SWD+K
Sbjct:  158 DHRCWERPEDMDTPRSVYKVTPQSPGSDVAGETAAALAAASIVFRVSDPSYSAKLLDAAQLVFDFADKYRGSYSDSLSSVVCPFYCSHSYHDELLWAASWLHLASPEKKDVYLSY---IGSNGHALGAEQDDFTFSWDDK 294          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN3_ORYSJ (Endoglucanase 3 OS=Oryza sativa subsp. japonica GN=GLU8 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 7.355e-12
Identity = 49/141 (34.75%), Postives = 66/141 (46.81%), Query Frame = 2
Query:   86 DHYCWMRPEDIDYDRPVTECSSCS---DXXXXXXXXXXXXXIVF-KDNKAYSQKLVHGAKTLFQFSRQQRARYSAG-SAEAAKFYNSTS-YWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            DH CW RPED+D  R V +    +   D             +VF K + AY+ +LV  AK +F+F+ + R  YS   S     +Y S S Y DE +WG AWL+ AT N +YL      G      V      ++   WDNK
Sbjct:  152 DHACWERPEDMDTPRTVYKVDPSTPGTDVAAETAAALAAASLVFRKSDPAYASRLVARAKRVFEFADKHRGTYSTRLSPYVCPYYCSYSGYQDELLWGAAWLHRATKNPTYLSYIQMNG-----QVLGADEQDNTFGWDNK 287          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN14_ORYSJ (Endoglucanase 14 OS=Oryza sativa subsp. japonica GN=Os05g0129200 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 9.606e-12
Identity = 52/153 (33.99%), Postives = 68/153 (44.44%), Query Frame = 2
Query:   44 VGAGDTSGGSTTPNDHYCWMRPEDIDYDRPVTECSSCSDXXXXXXXXXXXXXIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGN----SSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            VG GD+        DH CW RPE++D  R     ++ S                   N  +S  L+  AK LF+F++  R  Y      AAKFY S+   DE +W  AWLY ATG     S+Y+  AT  G     GV       S+ SWD+K
Sbjct:  166 VGDGDS--------DHSCWQRPENMDTPRTAYMVNASSPGSDIAAETAAALASAADAN--FSSTLLLHAKQLFEFAKNHRGLYHNSVPSAAKFYASSGDEDELLWAAAWLYIATGGEEEYSAYIAGATNVG-----GV------RSMFSWDDK 297          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN17_ARATH (Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02290 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.255e-11
Identity = 51/141 (36.17%), Postives = 66/141 (46.81%), Query Frame = 2
Query:   86 DHYCWMRPEDIDYDRPVTECSSC---SDXXXXXXXXXXXXXIVF-KDNKAYSQKLVHGAKTLFQFSRQQRARYSAG-SAEAAKFYNSTS-YWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            DH CW RPED+D  R V +       SD             IVF K + +YS+ L+  A ++F F+ + R  YSAG   +   FY S S Y DE +WG AWL  AT N  YL      G    A  +     ++   WDNK
Sbjct:  169 DHSCWERPEDMDTVRSVFKVDKNIPGSDVAAETAAALAAAAIVFRKSDPSYSKVLLKRAISVFAFADKYRGTYSAGLKPDVCPFYCSYSGYQDELLWGAAWLQKATKNIKYLNYIKINGQILGAAEY-----DNTFGWDNK 304          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN_PHAVU (Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.638e-11
Identity = 51/141 (36.17%), Postives = 66/141 (46.81%), Query Frame = 2
Query:   86 DHYCWMRPEDIDYDRPVTECSSCS---DXXXXXXXXXXXXXIVFKDNKA-YSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTS-YWDEFIWGGAWLYYATGNSSYLQ-LATTPGLGKHAGVFWGILDNSVLSWDNK 490
            DH CW RPED+D  R V +  + S   +             IVFK   A YS  L+  +K+LF F+ + R  YS     +  FY S S Y DE +W  AWLY A+G S YL  + +  G  +    F         SWDNK
Sbjct:  159 DHNCWERPEDMDTPRTVYKIDANSPGTEVAAEYAAALSAASIVFKKIDAKYSSTLLSHSKSLFDFADKNRGSYSG----SCPFYCSYSGYQDELLWAAAWLYKASGESKYLSYIISNQGWSQTVSEF---------SWDNK 286          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN8_ORYSJ (Endoglucanase 8 OS=Oryza sativa subsp. japonica GN=Os02g0778600 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.638e-11
Identity = 54/202 (26.73%), Postives = 83/202 (41.09%), Query Frame = 2
Query:   80 PN-DHYCWMRPEDIDYDRP---VTECSSCSDXXXXXXXXXXXXXIVFKDNKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNKXXXXXXXXXXXXXXXXPGYPYEEMLRTFHNQTSITMCSYLP--TFTTWNRTRGGLIQLNHG 667
            PN DH CW+RPE++   R    + + +  S+             +VF+ +K YS++L++ AK LFQF++  +  Y     E   + + + Y DE +W   WLY AT    Y        +      F         SWD K                 G      L++F +Q    +C+ LP   F   + T GG+I L  G
Sbjct:  158 PNADHQCWVRPENMPTPRTLYQINDKTPGSEIAAETAAAMTASSMVFRKDKPYSRRLLNKAKLLFQFAKTHQGTY---DGECPFYCSYSGYNDELLWAATWLYLATKRQVYADFIGHEAISSSVAEF---------SWDLKFPGAQVLLAELNMTSSGG------LQSFKSQADNFVCAVLPDTPFHQVSITPGGMIHLRDG 341          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN12_ARATH (Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44540 PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.795e-11
Identity = 47/141 (33.33%), Postives = 61/141 (43.26%), Query Frame = 2
Query:   83 NDHYCWMRPEDIDYDRPVTECSSC---SDXXXXXXXXXXXXXIVFKD-NKAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTSYWDEFIWGGAWLYYATGNSSYLQ-LATTPGLGKHAGVFWGILDNSVLSWDNK 490
            +DH CWMRPED+   R      +    SD             I F   +KAY+  L+  AK LF F++     Y      A  FY S+ Y DE +W  AWL+ AT +  YL  L    G G            SV +WD+K
Sbjct:  151 SDHKCWMRPEDMTTPRTSYRIDAQHPGSDLAGETAAAMAAASIAFAPFDKAYANILIGHAKDLFAFAKAHPGLYQNSITNAGGFYASSGYEDELLWAAAWLHRATNDQIYLNYLTQASGTGG---------PRSVFAWDDK 282          
BLAST of DY270575 vs. ExPASy Swiss-Prot
Match: GUN15_ORYSJ (Endoglucanase 15 OS=Oryza sativa subsp. japonica GN=Os05g0212300 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.650e-11
Identity = 52/154 (33.77%), Postives = 67/154 (43.51%), Query Frame = 2
Query:   44 VGAGDTSGGSTTPNDHYCWMRPEDIDYDRP---VTECSSCSDXXXXXXXXXXXXXIVFKDN-KAYSQKLVHGAKTLFQFSRQQRARYSAGSAEAAKFYNSTS-YWDEFIWGGAWLYYATGNSSYLQLATTPGLGKHAGVFWGILDNSVLSWDNK 490
            VG GDT        DH CW RPED+   R    V      SD             IVF+     Y+  L+  +K LF+F+ + R +Y A    A  +Y S S Y DE +W  AWL+ AT + SYL+     G     G  W I   +   WD K
Sbjct:  147 VGDGDT--------DHSCWQRPEDMTTSRQAFRVDPQHPGSDLAAETAAAMAAASIVFRGTYPGYANLLLVHSKQLFEFADKYRGKYDASITVARNYYGSFSGYGDELLWAAAWLFEATEDRSYLEYLAGNGEAL-GGTGWSI---NQFGWDVK 288          
The following BLAST results are available for this feature:
BLAST of DY270575 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
GUN13_ARATH3.301e-1233.57Endoglucanase 13 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN5_ORYSJ7.355e-1232.26Endoglucanase 5 OS=Oryza sativa subsp. japonica GN... [more]
GUN4_ORYSJ7.355e-1233.57Endoglucanase 4 OS=Oryza sativa subsp. japonica GN... [more]
GUN3_ORYSJ7.355e-1234.75Endoglucanase 3 OS=Oryza sativa subsp. japonica GN... [more]
GUN14_ORYSJ9.606e-1233.99Endoglucanase 14 OS=Oryza sativa subsp. japonica G... [more]
GUN17_ARATH1.255e-1136.17Endoglucanase 17 OS=Arabidopsis thaliana GN=At4g02... [more]
GUN_PHAVU1.638e-1136.17Endoglucanase OS=Phaseolus vulgaris PE=2 SV=2[more]
GUN8_ORYSJ1.638e-1126.73Endoglucanase 8 OS=Oryza sativa subsp. japonica GN... [more]
GUN12_ARATH2.795e-1133.33Endoglucanase 12 OS=Arabidopsis thaliana GN=At2g44... [more]
GUN15_ORYSJ3.650e-1133.77Endoglucanase 15 OS=Oryza sativa subsp. japonica G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP7YA16FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270575 ID=DY270575; Name=DY270575; organism=Citrus clementina; type=EST; length=1151bp
GATCAAGTATGGAATAGCTCGTCTGATCCATTACCTTTTTTAGGTTGGTG
CTGGGGATACTTCAGGTGGGAGCACCACTCCCAATGATCATTATTGCTGG
ATGCGCCCTGAGGACATTGATTATGATAGACCTGTTACAGAATGTAGCAG
TTGTTCGGATCTCGCTGCTGAAATGGCTGCTTCTTTGGCTGCTGCCTCCA
TTGTTTTCAAAGACAACAAGGCCTACTCACAGAAGCTAGTCCATGGTGCC
AAAACCCTCTTTCAGTTTTCAAGGCAACAGCGAGCCAGATACAGTGCTGG
CAGTGCAGAAGCTGCTAAGTTCTATAATTCTACTAGTTACTGGGATGAGT
TTATTTGGGGTGGAGCTTGGTTGTACTATGCAACAGGGAATTCTTCCTAT
CTTCAGCTTGCTACTACTCCAGGTCTTGGAAAACATGCTGGTGTTTTCTG
GGGAATTCTGGACAACAGTGTTCTTAGCTGGGACAACAAGCTTGCTGGTG
CTGCACTGCTTTTGAGCCGATTGAGATTGTTCTTGAGCCCCGGATATCCC
TATGAAGAAATGTTGAGGACATTTCACAATCAAACCAGTATAACTATGTG
CTCTTACCTTCCGACTTTTACTACTTGGAATAGAACCAGAGGAGGCTTGA
TCCAATTAAACCATGGAAACCCGCACCCTCTGCCATACCTTGTCCATGCA
GCCCTCTTGGCCACCCTTATTAGTTGATTATCCTGATGCCGCTGATACAC
CTGGATGGTACTGTGGACCCCATTTCTTTCCACTTGATACTTTCGGGATT
TTGCCAGACTCAAATCAATTACCTCCTTGGTAAAAATCCCCCGAAAAAGA
GTTACATTGGGGGTTTTGGAAATCCTTACCCTAACATGTCCCCCAAGGGG
GTCCCTTCCAACCCAAAAAAAAAAAATCCAATCCCTTGTAAAAGGAGGGA
GGGAATTTGAAAGACCTCCCAAAAACCCAAACCCCAAAACAACTTTTGGG
GAACCCCTGGTTGTGTGGTCCCCAACAAACCCAAAAGGGTTCCCCTGGAA
TTTCTCTCTCTCTATTAAAAATATAAACAAACCCAATCCCTCCCCGGGCC
AATGCCCCGGTTTTTTTTTCCTCCCCCCTTGGGGGGTCTCTTTCCCGGTG
T
back to top