DY270583

Overview
NameDY270583
Unique NameDY270583
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1127
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GLP1_MESCR (Germin-like protein OS=Mesembryanthemum crystallinum PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 1.285e-53
Identity = 106/183 (57.92%), Postives = 125/183 (68.31%), Query Frame = 2
Query:  104 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQ 646
            DP+ LQD CV +N P DG+FVNG FCKDP    P+DF F GL  P NT N LG   T      +PGLNTLGIS  R+D+AP+G  PPH HPRA+E+ +VLEGT +VGFVTS+  +  N L +KVLNKGD FVFP GLIHFQ NIG    V  S L+SQ PG ITIA+AVFG      P+ L+Q
Sbjct:   24 DPTQLQDFCVGVNKPNDGLFVNGLFCKDPMEVNPDDFLFRGLNMPANTDNALGFAATLVTAANLPGLNTLGISVARLDFAPHGLNPPHTHPRATEVFVVLEGTFYVGFVTSNLADGGNKLFAKVLNKGDVFVFPQGLIHFQLNIGNYPGVGISGLSSQNPGVITIANAVFG------PEHLSQ 200          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL811_ORYSJ (Germin-like protein 8-11 OS=Oryza sativa subsp. japonica GN=Os08g0190100 PE=1 SV=1)

HSP 1 Score: 209.92 bits (533), Expect = 2.191e-53
Identity = 117/199 (58.79%), Postives = 142/199 (71.36%), Query Frame = 2
Query:  104 DPSPLQDICVA-INNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPSPLQD CVA +++P   V VNG  C +PK    + FF + +       N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+  +N   SKVLNKGD FVFP+GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+ PPI+ D LA+AFQ++  T+  LQ +F
Sbjct:   24 DPSPLQDFCVADMHSP---VLVNGFACLNPKDVNADHFFKAAMLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-DNKFFSKVLNKGDVFVFPVGLIHFQFNPNPYKPAVAIAALSSQNPGAITIANAVFGSKPPISDDVLAKAFQVEKGTIDWLQAQF 218          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL81_ORYSJ (Putative germin-like protein 8-1 OS=Oryza sativa subsp. japonica GN=Os08g0188900 PE=3 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.882e-53
Identity = 122/217 (56.22%), Postives = 148/217 (68.20%), Query Frame = 2
Query:   44 IQFLIGFAVXXXXXXXXXXYDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQ 685
            I FL+  A+           +PSPLQD CVA  N    V VNG  CK+P     +DFF +  L KP +TA N++G + T  NV +IPGLNTLGIS  R+DYAP G  PPH HPRA+EI  VLEGTL+VGFVTS+  +N L SKVLNKGD FVFP GLIHFQFN+     A+A SA++SQ PG ITIA+AVF +NPPI+ D LA+AFQ+D K +  LQ
Sbjct:    5 ISFLLLAALIGMASWQAIAAEPSPLQDFCVADLN--SAVRVNGFACKNPTNVSADDFFKAAMLDKPRDTAVNKVGSNITLINVMEIPGLNTLGISIVRVDYAPLGLNPPHTHPRATEIFTVLEGTLYVGFVTSNP-DNKLFSKVLNKGDVFVFPKGLIHFQFNLDPHKPAIATSAISSQNPGIITIANAVFRSNPPISDDILAKAFQVDKKIIDLLQ 218          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL122_ORYSJ (Germin-like protein 12-2 OS=Oryza sativa subsp. japonica GN=Os12g0154800 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 4.882e-53
Identity = 121/202 (59.90%), Postives = 142/202 (70.30%), Query Frame = 2
Query:  104 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPSPLQD CVA  N    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+N PI+ D LA+AFQ+D K +  LQ +F
Sbjct:   24 DPSPLQDFCVADRNSP--VHVNGFPCKDAKDVNVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILTVLEGTLYVGFVTSNQANGENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSNSPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL85_ORYSJ (Germin-like protein 8-5 OS=Oryza sativa subsp. japonica GN=Os08g0189400 PE=2 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 1.420e-52
Identity = 118/199 (59.30%), Postives = 141/199 (70.85%), Query Frame = 2
Query:  104 DPSPLQDICVA-INNPKDGVFVNGKFCKDPKLAKPEDFFFSGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPSPLQD CVA +++P   V VNG  C +P     + FF +         N++G + T  NV QIPGLNTLGIS  RIDYAP GQ PPH HPRA+EIL VLEGTL+VGFVTS+  NNTL SKVLNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG+ PPI+ + LA+AFQ++  T+  LQ +F
Sbjct:   24 DPSPLQDFCVADMHSP---VRVNGFACLNPMEVNADHFFKAAKLDTPRKTNKVGSNVTLINVMQIPGLNTLGISIARIDYAPLGQNPPHTHPRATEILTVLEGTLYVGFVTSNP-NNTLFSKVLNKGDVFVFPQGLIHFQFNPNPHQPAVAIAALSSQNPGAITIANAVFGSKPPISDEVLAKAFQVEKGTIDWLQAQF 218          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL41_ORYSJ (Germin-like protein 4-1 OS=Oryza sativa subsp. japonica GN=Os04g0617900 PE=2 SV=2)

HSP 1 Score: 207.223 bits (526), Expect = 1.420e-52
Identity = 115/200 (57.50%), Postives = 133/200 (66.50%), Query Frame = 2
Query:  104 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFF-SGLGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQL--NNTLISKVLNKGDAFVFPIGLIHFQFNIGKTNAVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPS LQD CVA  +    VFVNG  CK+PK     DFF    LG PGNT N  G   T   V ++PGLNTLGIS  RID+AP GQ PPH HPRA+EIL VL+GTL VGFVTS+Q    N   +K+L  GD FVFP GLIHFQ N G   AVA +AL+SQ PG ITIA+AVFG+ PPI  D LA+AF +D   +  +Q KF
Sbjct:   29 DPSQLQDFCVA--DKLSAVFVNGFVCKNPKQVTANDFFLPKALGVPGNTVNAQGSAVTPVTVNELPGLNTLGISFARIDFAPNGQNPPHTHPRATEILTVLQGTLLVGFVTSNQPGGGNLQFTKLLGPGDVFVFPQGLIHFQLNNGAVPAVAIAALSSQNPGVITIANAVFGSTPPILDDVLAKAFMIDKDQVDWIQAKF 226          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL123_ORYSJ (Putative germin-like protein 12-3 OS=Oryza sativa subsp. japonica GN=Os12g0154900 PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 3.164e-52
Identity = 119/202 (58.91%), Postives = 142/202 (70.30%), Query Frame = 2
Query:  104 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGN-TANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPSPLQD+CVA  N    V VNG  CKD K    +DFF +  L KP + T ++ G + T  NV ++ GLNTLGIS  RIDYAP GQ PPH HPRA+EIL V+EG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      A A  AL+SQ PG ITIA+AVFG+NPPI+ D LA+AFQ+D K +  LQ +F
Sbjct:   24 DPSPLQDLCVADKNSP--VRVNGFPCKDAKDVSVDDFFLAANLDKPMDITKSKAGSNVTLINVMKLAGLNTLGISMARIDYAPKGQNPPHTHPRATEILSVIEGSLYVGFVTSNQANGENKLFTKTLNKGDVFVFPEGLIHFQFNPSYDKPAAAIVALSSQNPGAITIANAVFGSNPPISDDVLAKAFQVDKKAVDWLQAQF 223          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL124_ORYSJ (Putative germin-like protein 12-4 OS=Oryza sativa subsp. japonica GN=Os12g0155000 PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 4.133e-52
Identity = 119/202 (58.91%), Postives = 142/202 (70.30%), Query Frame = 2
Query:  104 DPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTA-NRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLN--NTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            DPSPLQD CVA  +    V VNG  CKD K    +DFF +  L KP +T  ++ G + T  NV ++ GLNTL IS  RIDYAP GQ PPH HPRA+EIL VLEG+L+VGFVTS+Q N  N L +K LNKGD FVFP GLIHFQFN      AVA +AL+SQ PG ITIA+AVFG++PPI+ D LA+AFQ+D K M  LQ +F
Sbjct:   24 DPSPLQDFCVA--DKHSPVRVNGLPCKDAKDVSVDDFFLAANLDKPMDTTKSKAGSNVTLINVMKLAGLNTLSISMARIDYAPKGQNPPHTHPRATEILTVLEGSLYVGFVTSNQANRENKLFTKTLNKGDVFVFPQGLIHFQFNPSYDKPAVAIAALSSQNPGAITIANAVFGSHPPISDDVLAKAFQVDKKAMDWLQAQF 223          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL84_ORYSJ (Germin-like protein 8-4 OS=Oryza sativa subsp. japonica GN=GER1 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.571e-51
Identity = 112/200 (56.00%), Postives = 139/200 (69.50%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            +DPSPLQD CVA  + K  V VNG  CK+P     +DFF +     P +T N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPHIHPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA S+LNSQ PG ITIA AVFG+ PPI+ D L +AFQ++ K +  L+ +F
Sbjct:   24 FDPSPLQDFCVA--DMKSPVRVNGFPCKNPMEVNSDDFFNAAKFDMPRSTMNKVGSNVTNLNVLNFPGLNTLGISLARIDYAPLGVNPPHIHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDTFVFPKAMIHFQMNLDHNKPAVAQSSLNSQNPGVITIASAVFGSKPPISDDVLTKAFQVEKKVIDWLKSQF 219          
BLAST of DY270583 vs. ExPASy Swiss-Prot
Match: GL83_ORYSJ (Germin-like protein 8-3 OS=Oryza sativa subsp. japonica GN=GER2 PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 7.794e-51
Identity = 110/200 (55.00%), Postives = 138/200 (69.00%), Query Frame = 2
Query:  101 YDPSPLQDICVAINNPKDGVFVNGKFCKDPKLAKPEDFFFSG-LGKPGNTANRLGVDETDANVEQIPGLNTLGISAFRIDYAPYGQRPPHIHPRASEILLVLEGTLHVGFVTSDQLNNTLISKVLNKGDAFVFPIGLIHFQFNIGKTN-AVAYSALNSQFPGEITIADAVFGANPPINPDFLAQAFQLDPKTMKDLQHKF 694
            +DPSPLQD CVA  +    V VNG  CK+P     +DFF +     P NT N++G + T+ NV   PGLNTLGIS  RIDYAP G  PPH+HPRA+E+L VLEGTL+VGFVTS+   N L SKV++KGD FVFP  +IHFQ N+     AVA SAL+SQ PG ITIA A+FG+ PPI+ D L +AFQ++ K +  L+ +F
Sbjct:   24 FDPSPLQDFCVA--DMASPVRVNGFPCKNPMNVTSDDFFNAAKFDMPRNTMNKVGSNVTNLNVINFPGLNTLGISLARIDYAPMGVNPPHVHPRATELLTVLEGTLYVGFVTSNP--NRLFSKVVHKGDVFVFPKAMIHFQMNLDHNKPAVAQSALSSQNPGVITIASAIFGSTPPISDDVLVKAFQVEKKVIDWLKSQF 219          
The following BLAST results are available for this feature:
BLAST of DY270583 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLP1_MESCR1.285e-5357.92Germin-like protein OS=Mesembryanthemum crystallin... [more]
GL811_ORYSJ2.191e-5358.79Germin-like protein 8-11 OS=Oryza sativa subsp. ja... [more]
GL81_ORYSJ4.882e-5356.22Putative germin-like protein 8-1 OS=Oryza sativa s... [more]
GL122_ORYSJ4.882e-5359.90Germin-like protein 12-2 OS=Oryza sativa subsp. ja... [more]
GL85_ORYSJ1.420e-5259.30Germin-like protein 8-5 OS=Oryza sativa subsp. jap... [more]
GL41_ORYSJ1.420e-5257.50Germin-like protein 4-1 OS=Oryza sativa subsp. jap... [more]
GL123_ORYSJ3.164e-5258.91Putative germin-like protein 12-3 OS=Oryza sativa ... [more]
GL124_ORYSJ4.133e-5258.91Putative germin-like protein 12-4 OS=Oryza sativa ... [more]
GL84_ORYSJ1.571e-5156.00Germin-like protein 8-4 OS=Oryza sativa subsp. jap... [more]
GL83_ORYSJ7.794e-5155.00Germin-like protein 8-3 OS=Oryza sativa subsp. jap... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YB04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270583 ID=DY270583; Name=DY270583; organism=Citrus clementina; type=EST; length=1127bp
GTTTGAGATAAGCACGTCCTGTTAATTAATCACCATGAAGGCAATTCAAT
TTCTTATAGGTTTTGCTGTCTTGGCTTTGGCTTCTTCTTTGGCCTCTGCC
TATGACCCTAGCCCTCTTCAAGATATCTGTGTAGCCATCAATAACCCCAA
GGATGGTGTGTTTGTGAATGGGAAGTTCTGCAAGGACCCCAAGCTTGCGA
AACCAGAAGATTTCTTCTTCTCAGGGCTTGGCAAGCCTGGAAACACAGCA
AATCGACTTGGTGTTGATGAAACAGATGCAAATGTTGAGCAAATTCCAGG
ACTCAACACCCTTGGCATATCAGCATTCCGTATTGACTATGCGCCATATG
GCCAAAGGCCACCTCATATTCACCCCCGTGCCAGTGAAATCCTGTTGGTC
CTGGAAGGAACTCTTCACGTCGGTTTTGTGACATCAGACCAACTGAATAA
CACACTCATCTCAAAAGTTCTGAATAAGGGAGATGCTTTTGTGTTTCCAA
TTGGTTTGATTCATTTCCAATTCAACATTGGAAAAACAAATGCAGTTGCC
TATTCTGCTCTCAACAGCCAGTTCCCCGGTGAAATTACCATAGCCGACGC
GGTCTTTGGAGCCAATCCTCCAATAAATCCCGATTTTCTTGCCCAGGCAT
TCCAGTTGGACCCGAAGACAATGAAAGATCTTCAGCATAAGTTCATTAAT
GGCCATTAGGAAAAGGAATTAATGAGCTTTAAAAAAATGGCCCCCTTAAT
AGTGCCTTTATTGTTTTAACTCCAAATTAACAAATCTTAATTAATGGAAA
AAAAAACTCCCTCCTGAACCTCTCTTCCGGCTGAATGAAGCCATGAAATA
AACATAATTTATGGTTTGTTTTATTTAAAAAAAAAAAAAAAAAAAAAAAA
AAACCCACCTTTCCTGGTAAAAGTTGGCCTTAAAAAAAAACCCTTTCCTA
ACATTTTGTTTCCCCCAACCCGTTCTCCTTCATCCCAAAAAAAAATATTA
TTTTCCCCCCCCCCCCAAAACCCCCCCAAAAGGAATCCAAAATACAAAGC
TCAAAAACCCTTTTCTCCGACAACCCCCTGGCCCCCACTCCTCCCAAATT
CCCCCAAGATGTTAATCTTCCCACACA
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