DY270607

Overview
NameDY270607
Unique NameDY270607
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: CARP_CANTR (Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 8.686e-11
Identity = 51/174 (29.31%), Postives = 86/174 (49.43%), Query Frame = 3 
Query:  330 YFGEIGIGTPPQNFTVIFDTGSSNLWV--PSSKCYFSIA------CYFHSKYRSGRSSTYKKNGKSADIHYGTGAIS-GFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVG----KAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            Y  +I +G+  Q  TV+ DTGSS+LWV    ++C  + +      C     +    SS+ +   +   I YG    S G F +D V  G + +K+Q+F + T         +   GI+G+GF  +  G      VPV   +  QG++N+  +S   + N+++   G+I+FGG+D
Sbjct:   74 YAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFSIEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVT-------TTSVDQGIMGIGFTAVEAGYNLYSNVPV--TLKKQGIINKNAYS--CDLNSEDASTGKIIFGGVD 236
The following BLAST results are available for this feature:
BLAST of DY270607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
CARP_CANTR8.686e-1129.31Candidapepsin OS=Candida tropicalis GN=SAPT1 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YC14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270607 ID=DY270607; Name=DY270607; organism=Citrus clementina; type=EST; length=1206bp
GATTATCTCTGCTCTCAAGCATTTCTCTGTATCGATCATCGAAAGAGACT
TTACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTT
CCTTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGT
TATACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTG
GCTGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAG
AAAATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTG
TTGCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATT
GGCACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAA
TTTGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCC
ATTCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAA
TCGGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGA
AGACCATGTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTG
AGGCAACTAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGC
ATACTTGGACTTGGCTTCCAAGAGATTTCTGTTGGAAAGGCTGTGCCCGT
GTGGTACAATATGGTAAATCAAGGCCTTGTCAATGAACCATTTTTCTCCT
TTTGGTTTAACCGAAATGCTGATGAGGAAGAAGGAGGTGAAATTGTTTTT
GGTGGGATGGACCCTACCATTAACAGGGTGAGCCCACATATGTTCCTGCA
CACAAAAAGGGTTTTGGCAGTTTAATATGGTGATGCCATGAATGAAGGGC
AAACAACAGGATTTTGCGCCTGGGGTGGTCCCGCAATGCTAAAATCGAGA
ACTCCTTTGTTTGGCTGGCCCCACCACCCATCCAAAACCCGGTTCACACA
GCCCCTTTGAACCCCCCGGGGAAATGTCCCTCAAAAAATAGGAGGGGGGA
AATTTTCACCAAATGGAAAAAGAAAAATTCCCAAAAGCGTTTTTTCACCC
CAAGGGAAAAAACCCTCCAAAAATTTTTGCCCTCCCATAATGTTGTTTGT
TTGGCCCCTCTTTTGAGGGGGGTTCCCCCAGAAGGATGTGATAATGATGG
GCGGCG
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