DY270607

Overview
NameDY270607
Unique NameDY270607
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1206
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: CHYM_SHEEP (Chymosin OS=Ovis aries GN=CYM PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 3.278e-34
Identity = 77/197 (39.09%), Postives = 117/197 (59.39%), Query Frame = 3
Query:  249 RKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMDPTINRVSPH 839
            ++Y +       G+   V L NY+D+QYFG+I +GTPPQ FTV+FDTGSS+ WVPS  C  S AC  H ++   +SST++  GK   I YGTG++ G    D V + ++V   Q    +T+EP   F  A+FDGILG+ +  ++   +VPV+ NM+++ LV +  FS + +R+    +G  +  G +DP+    S H
Sbjct:   47 QQYGVSSEYSGFGEVASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIRYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSVPVFDNMMDRRLVAQDLFSVYMDRSG---QGSMLTLGAIDPSYYTGSLH 239          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 4.281e-34
Identity = 83/210 (39.52%), Postives = 119/210 (56.67%), Query Frame = 3
Query:  210 LDSKEGESFRTSIRKYSLRGNLGES-------GDADIVA--LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            L  K+ ++ R ++R+ +L  N  E         D+ I    L+NY+D  Y G I IGTPPQ F V+FDTGS+NLWVP   C  S ACY H  +    SS++++ G    I YG+G I GF   D V+IG+LV  +Q F  +  E     L   FDGILGL F  + +   +P++ N+ + G  +EP F+F+ N N  + EG  ++FGG+D
Sbjct:   19 LPLKKMKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYGFDSL--PFDGILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLNTN--KPEGSVVMFGGVD 223          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: ASP3_CAEEL (Aspartic protease 3 OS=Caenorhabditis elegans GN=asp-3 PE=1 SV=2)

HSP 1 Score: 143.665 bits (361), Expect = 2.125e-33
Identity = 81/183 (44.26%), Postives = 106/183 (57.92%), Query Frame = 3
Query:  288 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYF-SIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGD----LVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGK-AVPVWYNMVNQGLVNEPFFSFWFNRNA-DEEEGGEIVFGGMDP 815
            DA    L +Y +AQY+G + IGTPPQNF V+FDTGSSNLWVP + C F  IAC  H+++   +SS+    G S +I YGTG++ G    D V  G        K+Q    AT EP +TF+ AKFDGI G+G+  ISV K + P+     N  +     F+FW +R+A D   GGEI     DP
Sbjct:   55 DAFNEGLSDYSNAQYYGPVTIGTPPQNFQVLFDTGSSNLWVPCANCPFGDIACRMHNRFDCKKSSSCTATGASFEIQYGTGSMKGTVDNDVVCFGHDTTYCTDKNQGLACATSEPGITFVAAKFDGIFGMGWDTISVNKISQPMDQIFANSAICKNQLFAFWLSRDANDITNGGEITLCETDP 237          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PAG1_SHEEP (Pregnancy-associated glycoprotein 1 OS=Ovis aries GN=PAG1 PE=2 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 4.430e-31
Identity = 81/211 (38.39%), Postives = 119/211 (56.40%), Query Frame = 3
Query:  195 RVAARLDSKEGESFRTSIRK---YSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSI--ACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            RV    ++  G+    S  K   Y L      + +  I  L+N MD  Y G I IGTPPQ F V+FDTGSS+L VPS  C       C    K++  +SST++    +  I++G+G + GF + D V+IGDLV  DQ F     E   ++L   FDGILGL + +IS   A+P++  + N+G  +EP F+F+ N+  D++EG  ++FGG+D
Sbjct:   23 RVKTMRNTLSGKKMLNSFLKEHAYRLSQISFRASNLTIHPLRNIMDMLYVGNITIGTPPQEFQVVFDTGSSDLLVPSINCLSPTKRPCSKQDKFKHHQSSTFRFTNDTFRIYFGSGTMRGFVAHDTVRIGDLVSTDQPFGLIFLE---SWLDIPFDGILGLNYPKISFSGAIPIFDKLKNEGAFSEPVFAFYLNK--DKQEGSVVMFGGVD 228          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PEPAF_RABIT (Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 7.557e-31
Identity = 74/177 (41.81%), Postives = 106/177 (59.89%), Query Frame = 3
Query:  288 DADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMDPT 818
            D     L+NY+D  Y G I IGTPPQ F V+ DTGS++LWVPS  C  S AC  H+ +    SST+  +G+  +I YG+G +SGF + D V+I  LV   Q F  + +EP      A FDGILGL +  +S     PV+ N+  QGL+++  F+F+   ++ EE G  ++ GG+DP+
Sbjct:   60 DVSFEPLRNYLDLAYIGIISIGTPPQEFKVVLDTGSADLWVPSIYCS-SPACGKHNTFNPLLSSTFLVSGRPINIVYGSGRMSGFLAYDTVQIAGLVDVAQAFGLSLQEPGKFMEYAVFDGILGLSYPSLSFEGITPVFDNLWAQGLISQNLFAFYL--SSKEERGSMLMLGGVDPS 233          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PAG1_BOVIN (Pregnancy-associated glycoprotein 1 OS=Bos taurus GN=PAG1 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 1.289e-30
Identity = 72/169 (42.60%), Postives = 103/169 (60.95%), Query Frame = 3
Query:  306 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            L+N  D  Y G I IGTPPQ F V+FDT SS+LWVPS  C  S AC  H ++R  +SST++   K+  I YG+G + G    D V+IG+LV  DQ F  +  E      +  +DG+LGL +  IS   A+P++  + NQ  ++EP F+F+ ++  DE EG  ++FGG+D
Sbjct:   63 LRNIKDLVYMGNITIGTPPQEFQVVFDTASSDLWVPSDFC-TSPACSTHVRFRHLQSSTFRLTNKTFRITYGSGRMKGVVVHDTVRIGNLVSTDQPFGLSIEEYGFEGRI--YDGVLGLNYPNISFSGAIPIFDKLKNQRAISEPVFAFYLSK--DEREGSVVMFGGVD 226          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PAG1_PIG (Pregnancy-associated glycoprotein 1 OS=Sus scrofa GN=PAG1 PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.861e-29
Identity = 72/189 (38.10%), Postives = 112/189 (59.26%), Query Frame = 3
Query:  246 IRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            I+K+ L+G+L  S     + L NY+D  Y G I IGTPPQ F+VIFDT SS+LWVPS++C+ S AC  H  +    SST++ + ++  +   +G +SG    D V+IG    ++Q F  +  EP      A FDG+LGLG+  +++    PV+ N+  QG + EP F+ + + N   ++G  ++ GG+D
Sbjct:   49 IQKFGLKGSLC-SPKISCLRLWNYLDMVYVGNITIGTPPQLFSVIFDTASSDLWVPSNQCH-SRACVTHRSFNPTLSSTFQSSNRTVKLAPHSGLVSGLLGYDTVQIGRFKSENQAFGLSQSEPVKELENAFFDGVLGLGYPSLAIQGTTPVFDNLRKQGQIPEPVFALYLSTNT--KKGSVLMIGGVD 233          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PLM1_PLAFA (Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2)

HSP 1 Score: 129.413 bits (324), Expect = 4.146e-29
Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  234 FRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATR----EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            F+T + +    GN G+S     V L +  +  Y+GE  IG   Q F  IFDTGS+NLWVPS++C  +I C   + Y S +S TY+K+G   +++Y +G +SGFFS+D V I +L     +FIE T     EP+ T  L +FDGI+GLG++++S+G   PV   + NQ  + +  F+F+     D++  G +  GG++
Sbjct:  112 FKTGLTQKPHLGNAGDS-----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYT--LGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYL--PFDDKHKGYLTIGGIE 297          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: PLM1_PLAF7 (Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0076 PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 4.146e-29
Identity = 75/197 (38.07%), Postives = 116/197 (58.88%), Query Frame = 3
Query:  234 FRTSIRKYSLRGNLGESGDADIVALKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIGDLVVKDQEFIEATR----EPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRNADEEEGGEIVFGGMD 812
            F+T + +    GN G+S     V L +  +  Y+GE  IG   Q F  IFDTGS+NLWVPS++C  +I C   + Y S +S TY+K+G   +++Y +G +SGFFS+D V I +L     +FIE T     EP+ T  L +FDGI+GLG++++S+G   PV   + NQ  + +  F+F+     D++  G +  GG++
Sbjct:  112 FKTGLTQKPHLGNAGDS-----VTLNDVANVMYYGEAQIGDNKQKFAFIFDTGSANLWVPSAQCN-TIGCKTKNLYDSNKSKTYEKDGTKVEMNYVSGTVSGFFSKDIVTIANLSF-PYKFIEVTDTNGFEPAYT--LGQFDGIVGLGWKDLSIGSVDPVVVELKNQNKIEQAVFTFYL--PFDDKHKGYLTIGGIE 297          
BLAST of DY270607 vs. ExPASy Swiss-Prot
Match: ASP6_CAEEL (Aspartic protease 6 OS=Caenorhabditis elegans GN=asp-6 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.926e-26
Identity = 71/178 (39.89%), Postives = 95/178 (53.37%), Query Frame = 3
Query:  306 LKNYMDAQYFGEIGIGTPPQNFTVIFDTGSSNLWVPSSKCYFSIACYFHSKYRSGRSSTYKKNGKSADIHYGTGAISGFFSEDHVKIG-----DLVVKDQEFIEATREPSLTFLLAKFDGILGLGFQEISVGKAVPVWYNMVNQGLVNEPFFSFWFNRN--ADEEEGGEIVFGGMDPT 818
            + ++ D +Y G I IGTP Q F V+ DTGSSNLW+P   C     C   SK+ S  SST+ KNGKS  I YG+G  +G   +D V+ G      L V    F  A++  S  F     DGILGL F  ++V   VP   N +NQG++++P FS W      A+   GG   +G +D T
Sbjct:   63 VNDFGDFEYLGNITIGTPDQGFIVVLDTGSSNLWIPGPTC--KTNCKTKSKFDSTASSTFVKNGKSWTIQYGSGDAAGILGQDTVRFGAKGDSQLSVPTTTFGIASK-ISADFKNDATDGILGLAFTSLAVDGVVPPLINAINQGILDQPLFSVWLEHRGAANNVGGGVFTYGAIDTT 237          
The following BLAST results are available for this feature:
BLAST of DY270607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
CHYM_SHEEP3.278e-3439.09Chymosin OS=Ovis aries GN=CYM PE=2 SV=1[more]
PAG2_BOVIN4.281e-3439.52Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
ASP3_CAEEL2.125e-3344.26Aspartic protease 3 OS=Caenorhabditis elegans GN=a... [more]
PAG1_SHEEP4.430e-3138.39Pregnancy-associated glycoprotein 1 OS=Ovis aries ... [more]
PEPAF_RABIT7.557e-3141.81Pepsin F OS=Oryctolagus cuniculus PE=2 SV=1[more]
PAG1_BOVIN1.289e-3042.60Pregnancy-associated glycoprotein 1 OS=Bos taurus ... [more]
PAG1_PIG1.861e-2938.10Pregnancy-associated glycoprotein 1 OS=Sus scrofa ... [more]
PLM1_PLAFA4.146e-2938.07Plasmepsin-1 OS=Plasmodium falciparum PE=1 SV=2[more]
PLM1_PLAF74.146e-2938.07Plasmepsin-1 OS=Plasmodium falciparum (isolate 3D7... [more]
ASP6_CAEEL1.926e-2639.89Aspartic protease 6 OS=Caenorhabditis elegans GN=a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YC14FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270607 ID=DY270607; Name=DY270607; organism=Citrus clementina; type=EST; length=1206bp
GATTATCTCTGCTCTCAAGCATTTCTCTGTATCGATCATCGAAAGAGACT
TTACTTGTCAACATGGGAACGGTATTCAAATCTATTACAGCCGGTTTCTT
CCTTTGTTTGCTTCTGTTTCCTGTGGTGTTCTCGACACCAAACGGTGGGT
TATACAGAATCGGACTTAAAAAGAGGAAGTTTGACCTGAACAACAGAGTG
GCTGCCCGCCTTGACTCCAAGGAAGGAGAGTCATTCAGAACTTCTATCAG
AAAATATTCTCTTCGTGGAAACTTAGGAGAGTCAGGGGATGCTGATATTG
TTGCGCTGAAGAACTACATGGATGCTCAGTACTTTGGTGAGATTGGTATT
GGCACACCCCCGCAAAATTTCACTGTGATATTTGACACTGGTAGTTCAAA
TTTGTGGGTGCCCTCTTCTAAGTGTTATTTCTCGATTGCATGCTATTTCC
ATTCCAAGTACAGGTCAGGCCGCTCAAGTACCTACAAGAAGAATGGTAAA
TCGGCTGATATCCATTATGGAACTGGAGCTATTTCTGGTTTTTTTAGTGA
AGACCATGTCAAAATCGGTGATCTTGTGGTCAAAGATCAGGAATTTATTG
AGGCAACTAGGGAGCCCAGCCTCACTTTCTTGCTGGCCAAGTTTGATGGC
ATACTTGGACTTGGCTTCCAAGAGATTTCTGTTGGAAAGGCTGTGCCCGT
GTGGTACAATATGGTAAATCAAGGCCTTGTCAATGAACCATTTTTCTCCT
TTTGGTTTAACCGAAATGCTGATGAGGAAGAAGGAGGTGAAATTGTTTTT
GGTGGGATGGACCCTACCATTAACAGGGTGAGCCCACATATGTTCCTGCA
CACAAAAAGGGTTTTGGCAGTTTAATATGGTGATGCCATGAATGAAGGGC
AAACAACAGGATTTTGCGCCTGGGGTGGTCCCGCAATGCTAAAATCGAGA
ACTCCTTTGTTTGGCTGGCCCCACCACCCATCCAAAACCCGGTTCACACA
GCCCCTTTGAACCCCCCGGGGAAATGTCCCTCAAAAAATAGGAGGGGGGA
AATTTTCACCAAATGGAAAAAGAAAAATTCCCAAAAGCGTTTTTTCACCC
CAAGGGAAAAAACCCTCCAAAAATTTTTGCCCTCCCATAATGTTGTTTGT
TTGGCCCCTCTTTTGAGGGGGGTTCCCCCAGAAGGATGTGATAATGATGG
GCGGCG
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