DY270624

Overview
NameDY270624
Unique NameDY270624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1210
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270624 vs. ExPASy Swiss-Prot
Match: G6PD_STRPN (Glucose-6-phosphate 1-dehydrogenase OS=Streptococcus pneumoniae GN=zwf PE=3 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 2.539e-18
Identity = 61/228 (26.75%), Postives = 110/228 (48.25%), Query Frame = 1
Query:   94 YFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPSNV----ILGQYKA---------TFDDKVDVKLNILTPTYFAAVLYIDNARWDGVPFLIKAGMGLIKHRVEIRIQFRHVPGNIYHDRFGHNINLATNELILRDVPDEAILVRVNNKVPGLGLQLDASELNLLYKDKYNAEVPDSYQHLLLDVIDGDNHLFMRSDELTAAWNILNPV 738
            Y+D  G +RD+V +H LQ ++LLAM+ P S   ++IR EK+KV +++       +    I GQY++         ++  + +V     T T+ +   ++D+ R+ GVPF  + G  L +    + I F+ +        FG    LA N L +   P E   + +N K  G    L  + L+           P+ Y+ L+ DV++ ++  F   DE+ A+W +++ +
Sbjct:  225 YYDQSGALRDMVQNHTLQLLSLLAMDKPASFTKDEIRAEKIKVFKNLYHPTDEELKEHFIRGQYRSGKIDGMKYISYRSEPNVNPESTTETFTSGAFFVDSDRFRGVPFFFRTGKRLTEKGTHVNIVFKQM-----DSIFGE--PLAPNILTIYIQPTEGFSLSLNGKQVGEEFNLAPNSLDYRTDATATGASPEPYEKLIYDVLNNNSTNFSHWDEVCASWKLIDRI 445          
BLAST of DY270624 vs. ExPASy Swiss-Prot
Match: G6PE_MOUSE (GDH/6PGL endoplasmic bifunctional protein OS=Mus musculus GN=H6pd PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.067e-16
Identity = 67/252 (26.59%), Postives = 119/252 (47.22%), Query Frame = 1
Query:   82 GYMRYFDGYGIIRDIVHSHILQTIALLAMEPPISLNGE-DIRNEKVKVLRSIRRLEPSNVILGQYKATFDDKVDVKLN------ILTPTYFAAVLYIDNARWDGVPFLIKAGMGLIKHRVEIRIQFRH-----------VPGN-----------IYHDRFGHNINLATNELILRDVPDEAILVRVNNKVPGLGLQLDASELNLLYKDKYNAEVPDSYQHLLLDVIDGDNHLFMRSDELTAAWNILNPVLPEI 750
            G   +++ YG+IRD + +H+ + + L+AME P++++    +   K+   +++R L+ S+ ILGQY+A +  +V  +L        LTPT+   +++IDN RW+GVPF++ +G  L +    +RI F++           VP             I H   GH   L +  L    +P +    +        GL+L    L+  Y  +   E  D+Y  LL  +       F+ ++ L A+W    P+L  +
Sbjct:  246 GRASFYEEYGVIRDTLQNHLTEILTLVAMELPLNISSSATVLQHKLWAFQALRGLQKSSAILGQYQA-YSGQVRRELQKPDGFQSLTPTFAGVLVHIDNLRWEGVPFILMSGKALDERVGYVRIVFKNRAYCTQSERHWVPEQSRCLPQQIIFYIGHGELGHPAILVSRNLFKPSLPTQ----KWKEVQDQPGLRLFGRPLSDYYAYRPVRE-QDAYSTLLSHIFHCRKESFITTENLLASWVFWTPLLDSL 491          
BLAST of DY270624 vs. ExPASy Swiss-Prot
Match: G6PE_RABIT (GDH/6PGL endoplasmic bifunctional protein OS=Oryctolagus cuniculus GN=H6PD PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 1.393e-16
Identity = 68/265 (25.66%), Postives = 126/265 (47.55%), Query Frame = 1
Query:   82 GYMRYFDGYGIIRDIVHSHILQTIALLAMEPPISLN-GEDIRNEKVKVLRSIRRLEPSNVILGQYKATFDDKVDVKLN------ILTPTYFAAVLYIDNARWDGVPFLIKAGMGLIKHRVEIRIQFRH-----------VPGN-----------IYHDRFGHNINLATNELILRDVPDEAILVRVNNKVPGLGLQLDASELNLLYKDKYNAEVPDSYQHLLLDVIDGDNHLFMRSDELTAAWNILNPVLPEIDKNNIAPELYEPG 789
            G   +++ YG+IRD + +H+ + + L+AME P +++  E +   K++  R++RRL+  + ++GQY+ T+ ++V  +L        LTPT+   ++++DN R +GVPF++ +G  L +    +R+ F++            P             I H   GH   + +  L    +P ++    V ++    GLQL    L+  Y      E  D+Y  LL  +       F+ ++ L A+W    P+L  + +    P LY  G
Sbjct:  230 GRTSFYEEYGVIRDTLQNHLTEILTLVAMELPANVSCSEAVLRHKLQAFRALRRLQRGSAVVGQYQ-TYSEQVRGELRKPAGSPSLTPTFAGVLVHVDNLRMEGVPFILMSGKALDERVGYVRVLFKNQAFCAQSEKHWAPAQSRCLPRCIIFYIGHGELGHPAVVVSRNLFRPFLPAQS-WREVEDRP---GLQLFGRPLSDFYAFSPVKE-RDAYSILLSHIFHARKESFVPTEHLLASWVFWTPLLESLARE--VPRLYPGG 486          
BLAST of DY270624 vs. ExPASy Swiss-Prot
Match: G6PD_LEUME (Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc mesenteroides GN=zwf PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 1.703e-14
Identity = 58/243 (23.87%), Postives = 105/243 (43.21%), Query Frame = 1
Query:   94 YFDGYGIIRDIVHSHILQTIALLAMEPPISLNGEDIRNEKVKVLRSIRRLEPSNV----ILGQYKA-------TFDDKVDVKLNILTPTYFAAVLYIDNARWDGVPFLIKAGMGLIKHRVEIRIQFRHVPGNIYHDRFGHNINLATNELILRDVPDEAILVRVNNKVPGLGLQLDASELNLLYKDKYNAEVPDSYQHLLLDVIDGDNHLFMRSDELTAAWNILNPVLPEIDKNNIAPELYEPG 789
            Y+D  G + D++ +H +Q +  LAME P S   +DIR  K     +++  + + V    +  QY A        + +++DV  +    T+ A  L  D  RW+GVPF +++G  L   +  + I F+    N     FG         L +   P  AI +++N K           +L     D+     P+ Y+ ++ D ++GD   F   + ++ AW  ++ +      +    E Y+ G
Sbjct:  227 YYDTAGALLDMIQNHTMQIVGWLAMEKPESFTDKDIRAAKNAAFNALKIYDEAEVNKYFVRAQYGAGDSADFKPYLEELDVPADSKNNTFIAGELQFDLPRWEGVPFYVRSGKRLAAKQTRVDIVFKAGTFN-----FGSEQEAQEAVLSIIIDPKGAIELKLNAKSVEDAFNTRTIDLGWTVSDEDKKNTPEPYERMIHDTMNGDGSNFADWNGVSIAWKFVDAISAVYTADKAPLETYKSG 464          
The following BLAST results are available for this feature:
BLAST of DY270624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 64
Match NameE-valueIdentityDescription
G6PD_STRPN2.539e-1826.75Glucose-6-phosphate 1-dehydrogenase OS=Streptococc... [more]
G6PE_MOUSE1.067e-1626.59GDH/6PGL endoplasmic bifunctional protein OS=Mus m... [more]
G6PE_RABIT1.393e-1625.66GDH/6PGL endoplasmic bifunctional protein OS=Oryct... [more]
G6PD_LEUME1.703e-1423.87Glucose-6-phosphate 1-dehydrogenase OS=Leuconostoc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YD10FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270624 ID=DY270624; Name=DY270624; organism=Citrus clementina; type=EST; length=1210bp
TTCAATTTATCTTCACTAACAAAGCCAATTATCTTATCCTCATGTCATTC
TACGGTATCAATATCTGTTGTGTAATTTTTCGGTTATATGAGGTATTTTG
ATGGTTATGGGATCATCCGAGACATAGTGCACAGTCATATACTCCAAACC
ATAGCATTGCTTGCTATGGAGCCCCCCATAAGTCTCAATGGTGAAGATAT
CCGGAATGAAAAGGTCAAAGTTTTGAGGTCAATCCGCAGATTGGAGCCAA
GCAATGTCATTCTTGGCCAATATAAAGCTACTTTTGATGACAAGGTTGAT
GTTAAATTGAACATCCTGACCCCCACATATTTTGCTGCTGTATTATACAT
TGACAATGCACGTTGGGATGGCGTGCCTTTTCTAATAAAAGCTGGCATGG
GACTAATTAAACACAGAGTGGAGATACGCATACAGTTTCGTCATGTTCCG
GGAAACATCTATCATGATCGTTTTGGGCATAACATCAACCTTGCCACAAA
TGAATTAATATTACGTGATGTGCCTGATGAGGCCATTCTAGTCAGAGTCA
ACAACAAAGTTCCAGGATTAGGCTTGCAATTGGATGCTTCAGAGCTTAAT
TTGCTCTATAAGGATAAGTATAATGCAGAGGTGCCTGATTCATACCAACA
TCTTCTTCTTGATGTTATTGACGGCGACAACCATCTCTTCATGAGAAGCG
ATGAGCTTACTGCTGCATGGAATATTTTAAACCCAGTTTTACCAGAAATA
GACAAGAACAATATTGCACCAGAACTTTACGAGCCTGGGTGGTAAAGGTC
CCCGTTGGAACCTATTATCTTTGGGGCAAAAACCGGGGTTCAGTGGAACC
GAAAAATAGAAGGCAACACTTCCTTAAAGGAAGATTTTGGGTTATGCCCC
CCAACACAAGTTGTCGAAAACCGGGCCTCCAAATCCAAAAAGTACCTTTA
AACTTTCTTTTTGTAATGAAAAAATGAGGGAGAGGTTATTTTGCTTTTGT
TAAAAAAAAAATTTTTTAATGGATATTTTGTAATGGGTTAAAAAAAAAAA
AAAAAAAAAAAACCCCCCTTTTTCTCTTGTTAATATTTGCTAATTTAAAA
AAAAACTCTTCTTTTATCCATTTTTTATCCACGCAGACCGGTCCCCCCTC
TCCCCCCAAAAAAAAAAAACCAATTTTCTTTGGCCCCCAGCCCAAAACAC
CCCCCAGATA
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