DY270831

Overview
NameDY270831
Unique NameDY270831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 3.762e-51
Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = 2
Query:   38 TSNNRKLTEETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAA--VAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNC 634
            T+ N+  T  T+   G+P WLS  D+RLL++  V  N+VVA DGSG+F TV+AA  VA   +  + R++I +K G+Y+EN+ V   + +IM +GDG   TIITG R+V  G TT+ SAT  + G  F+A+ ITF+NTAGP+K QAVALR  +DLS FY C +  YQDTL VHS RQF+  C I GTVDFIFGNAAA   NC
Sbjct:  189 TAGNKGNT--TANQKGFPTWLSRKDKRLLRA--VRANLVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIYQENINVRLNNDDIMLVGDGMRSTIITGGRSVQGGYTTYNSATAGIEGLHFIAKGITFRNTAGPAKGQAVALRSSSDLSIFYKCSIEGYQDTLMVHSQRQFYRECYIYGTVDFIFGNAAAVFQNC 385          

HSP 2 Score: 27.335 bits (59), Expect = 3.762e-51
Identity = 25/79 (31.65%), Postives = 33/79 (41.77%), Query Frame = 3
Query:  672 NLVPAQGRTDPTQNPRLCLQKPRNGAPSHLIPVSR*FPQPSPAGPGRILSRTV-------DMPSPISDWSPPCPGDQLG 887
            N++ AQGR DP QN  + +   R      L PV     +     P    SRTV       ++ SP+  WSP   G   G
Sbjct:  398 NVITAQGRADPFQNTGISIHNSRILPAPDLKPVVG-TVKTYMGRPWMKFSRTVVLQTYLDNVVSPVG-WSPWIEGSVFG 474          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 9.944e-51
Identity = 100/197 (50.76%), Postives = 127/197 (64.47%), Query Frame = 2
Query:   80 DGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAK 670
            DG P+W++ G RRLL   +V PN VVA DGSG FKT+  A+   P      ++I +KAGVY+E V V K+   +  IGDG T+T  TGS N  DG  T+ +AT  V G  F+A+DI F+NTAG  KHQAVALRV AD + FYNC M  +QDTLYV S RQF+ +C I+GT+DF+FG       NC + C    +PAK
Sbjct:  109 DGIPSWVNDGHRRLLAGGNVQPNAVVAQDGSGQFKTLTDALKTVPPKNAVPFVIHVKAGVYKETVNVAKEMNYVTVIGDGPTKTKFTGSLNYADGINTYNTATFGVNGANFMAKDIGFENTAGTGKHQAVALRVTADQAIFYNCQMDGFQDTLYVQSQRQFYRDCSISGTIDFVFGERFGVFQNCKLVCR---LPAK 302          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 2.215e-50
Identity = 100/199 (50.25%), Postives = 134/199 (67.34%), Query Frame = 2
Query:   83 GWPAWLSPGDRRLLQS--SSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKK 673
            G+P W+S  DR LLQ        N+VVA +G+GN+ T+  A++AAP     R++I IK G Y EN+E+ ++   IMFIGDG  RT+I  +R+  DG T F SATV V G GF+A+D++F N AGP KHQAVALR  +DLSA+Y C   +YQDT+YVHS++QF+  C I GTVDFIFG+A+    NC +   + P P +K
Sbjct:  184 GFPMWVSGSDRNLLQDPVDETKVNLVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFESYQDTIYVHSHKQFYRECDIYGTVDFIFGDASVVFQNCSL-YARRPNPNQK 381          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 6.445e-50
Identity = 97/195 (49.74%), Postives = 128/195 (65.64%), Query Frame = 2
Query:   80 DGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIP 664
            + +P W+ PG RRLLQ+ ++TP+V VAADGSG+ +TV  AV   P+ G   ++I +KAG Y ENV + K   N+   GDGR +TII+GS N+VDG  TF ++T A  G+GF+ +D+   NTAGP KHQAVA R  +D S +Y C    YQDTLY HSNRQ++ NC + GTVDFIFG        C I   + P+P
Sbjct:  638 NSFPNWVRPGVRRLLQAKNLTPHVTVAADGSGDVRTVNEAVWRVPKKGKTMFVIYVKAGTYVENVLMKKDKWNVFIYGDGRDKTIISGSTNMVDGVRTFNTSTFATEGKGFMMKDMGIINTAGPEKHQAVAFRSDSDRSVYYRCSFDGYQDTLYTHSNRQYYRNCDVTGTVDFIFGAGTVVFQGCSIR-PRQPLP 831          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 6.445e-50
Identity = 105/202 (51.98%), Postives = 133/202 (65.84%), Query Frame = 2
Query:   86 WPAWLSPGDRRLLQSSS-------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAK 670
            +P W+   D R L+ SS        + ++VVAADG+GNF T+  A++ AP     R +I +K GVY EN+++     NI+ IGDG   T ITG+R+V DG TTF+SAT+AV GEGFLARDI   NTAGP KHQAVALRV AD  A Y C +  YQDTLY HS RQF+  C I GT+D+IFGNAA     C+I  +K P+P +
Sbjct:  210 FPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDGYQDTLYTHSFRQFYRECDIYGTIDYIFGNAAVVFQGCNI-VSKLPMPGQ 410          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME36_ARATH (Probable pectinesterase/pectinesterase inhibitor 36 OS=Arabidopsis thaliana GN=PME36 PE=2 SV=1)

HSP 1 Score: 192.586 bits (488), Expect = 6.945e-50
Identity = 100/173 (57.80%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  131 SSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRY---IIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            +S   + VVA DGS   +T+  A+AA  + G  R    II IKAGVY E +E+ +  KNIM +GDG  RTI+T +RNV DGSTT+ SAT  V G+GF ARDITF+NTAGP KHQAVALRV +DLS FY C    YQDTL+ HS RQF+ +  I GT+DFIFG+AAA   NCDI
Sbjct:  200 TSSRADFVVARDGSATHRTINQALAAVSRMGKSRLNRVIIYIKAGVYNEKIEIDRHMKNIMLVGDGMDRTIVTNNRNVPDGSTTYGSATFGVSGDGFWARDITFENTAGPHKHQAVALRVSSDLSLFYRCSFKGYQDTLFTHSLRQFYRDRHIYGTIDFIFGDAAAVFQNCDI 372          

HSP 2 Score: 27.335 bits (59), Expect = 6.945e-50
Identity = 23/82 (28.05%), Postives = 33/82 (40.24%), Query Frame = 3
Query:  621 VLQIVTSHARKAQFRPKNLVPAQGRTDPTQNPRLCLQKPRNGAPSHLIPVSR*FPQPSPAGPGRILSRTVDMPSPISDWSPP 866
            V Q      R+      N++ AQGR DP  N  + +Q  R  A      V   F +     P +  SRTV + + I +   P
Sbjct:  366 VFQNCDIFVRRPMDHQGNMITAQGRDDPHTNSGISIQHSRIRAAPEFEAVKGRF-KSYLGRPWKKYSRTVFLKTDIDELIDP 446          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 2.449e-49
Identity = 106/225 (47.11%), Postives = 144/225 (64.00%), Query Frame = 2
Query:    5 NMTLTDMMIMRTSNNRKLTEETSTGDGWPAWLSPGDRRLLQS--SSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKK 673
            N++ +  M+   S  +   + +     +P+WLS  D+RLL++       N+ VA DG+GNF T+  AV AAP     R+II IK G Y ENVE+ KK   IMFIGDG  +T+I  +R+ +DG +TF++ TV V G+G++A+DI+F N+AGP+K QAVA R G+D SAFY C+   YQDTLYVHS +QF+  C I GT+DFIFGNAA    N  +   K P P  K
Sbjct:  172 NLSNSLHMLQVISRKKPSPKSSEVDVEYPSWLSENDQRLLEAPVQETNYNLSVAIDGTGNFTTINDAVFAAPNMSETRFIIYIKGGEYFENVELPKKKTMIMFIGDGIGKTVIKANRSRIDGWSTFQTPTVGVKGKGYIAKDISFVNSAGPAKAQAVAFRSGSDHSAFYRCEFDGYQDTLYVHSAKQFYRECDIYGTIDFIFGNAAVVFQNSSLYARK-PNPGHK 395          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 4.438e-49
Identity = 102/229 (44.54%), Postives = 149/229 (65.07%), Query Frame = 2
Query:    2 KNMT--LTDMMIMRTSNNRKLTEETSTGDG--------WPAWLSPGDRRLLQSS--SVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTK 652
            +N+T  LT+ + M  S+ +K +  ++   G        +P W+S  DR+LL++S   + P+ VVAADGSG   +V  A+A+  +G + R +I + AG Y+EN+ +  K KN+M +GDG+ +T+I GSR+   G  T++SATVA +G+GF+ARDITF N+AGP+  QAVALRVG+D S  Y C +  YQD+LY  S RQF+    I GTVDFIFGN+A    +C++   K
Sbjct:  168 RNLTGLLTNSLDMFVSDKQKSSSSSNLTGGRKLLSDHDFPTWVSSSDRKLLEASVEELRPHAVVAADGSGTHMSVAEALASLEKG-SGRSVIHLTAGTYKENLNIPSKQKNVMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRK 395          

HSP 2 Score: 27.335 bits (59), Expect = 4.438e-49
Identity = 24/72 (33.33%), Postives = 31/72 (43.06%), Query Frame = 3
Query:  669 KNLVPAQGRTDPTQNPRLCLQKPR-NGAPSHLIPVSR*FPQPSPAGPGRILSRTVDMPSPI------SDWSP 863
            +N V AQGR+DP QN  + +   R  G+    +             P +  SRTV M S I      S WSP
Sbjct:  400 QNYVTAQGRSDPNQNTGISIHNCRITGSTKTYL-----------GRPWKQYSRTVVMQSFIDGSIHPSGWSP 460          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 9.307e-49
Identity = 106/222 (47.75%), Postives = 139/222 (62.61%), Query Frame = 2
Query:    8 MTLTDMMIMRTSNNRKLTEETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQ---GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIP 664
            MT     +  + + RKL +  S GDG        D  ++  S +   V V+ DG+GNF  + AAVAAAP    G    ++I + AG+Y E + + K  + +M IGDG  +T++TG+R+VVDG TTF SAT AV    F+A +ITF+NTAGP KHQAVALR GAD S FY+C   AYQDTLY HS RQF+  C + GTVDFIFGNAA    NC++   + P+P
Sbjct:  228 MTEKTKAVYESLSRRKLADGDSNGDG-------DDGSMVLISDI---VTVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVFQNCNL-YPRKPMP 438          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 9.820e-49
Identity = 94/178 (52.81%), Postives = 126/178 (70.79%), Query Frame = 2
Query:  113 RRLLQSSSVTPN--VVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            RRLL+S  +     +VVA DGSG ++T+  A+A   +   K  II +K GVY ENV V K   N++ +GDG+++TI++   N +DG+ TF++AT AV G+GF+ARD+ F NTAGP+KHQAVAL V ADLS FY C M A+QDT+Y H+ RQF+ +C+I GTVDFIFGNAA     C+I
Sbjct:  244 RRLLESGDLKKKATIVVAKDGSGKYRTIGEALAEVEEKNEKPTIIYVKKGVYLENVRVEKTKWNVVMVGDGQSKTIVSAGLNFIDGTPTFETATFAVFGKGFMARDMGFINTAGPAKHQAVALMVSADLSVFYKCTMDAFQDTMYAHAQRQFYRDCVILGTVDFIFGNAAVVFQKCEI 421          

HSP 2 Score: 24.6386 bits (52), Expect = 9.820e-49
Identity = 12/27 (44.44%), Postives = 15/27 (55.56%), Query Frame = 3
Query:  669 KNLVPAQGRTDPTQNPRL----CLQKP 737
            +N + AQGR DP QN  +    C  KP
Sbjct:  431 QNTITAQGRKDPNQNTGISIHNCTIKP 457          
The following BLAST results are available for this feature:
BLAST of DY270831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PME59_ARATH3.762e-5152.74Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME_MEDSA9.944e-5150.76Pectinesterase/pectinesterase inhibitor OS=Medicag... [more]
PME40_ARATH2.215e-5050.25Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME26_ARATH6.445e-5049.74Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME12_ARATH6.445e-5051.98Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME36_ARATH6.945e-5057.80Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME39_ARATH2.449e-4947.11Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME35_ARATH4.438e-4944.54Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME7_ARATH9.307e-4947.75Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME46_ARATH9.820e-4952.81Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YO04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270831 ID=DY270831; Name=DY270831; organism=Citrus clementina; type=EST; length=1103bp
CAAGAACATGACCCTTACTGACATGATGATCATGAGGACTTCAAACAACA
GGAAGCTGACAGAGGAGACCAGTACGGGTGATGGGTGGCCGGCTTGGCTG
TCCCCCGGCGACAGGAGGCTGTTGCAGTCGTCGTCGGTGACACCGAACGT
GGTGGTGGCGGCAGATGGCAGCGGAAACTTTAAGACGGTTGAGGCAGCGG
TGGCGGCGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAA
GCTGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATAT
AATGTTCATCGGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAA
ATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTT
GGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCC
CTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCAT
TTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCG
AACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCAT
TTTTGGTAATGCTGCAGCCCGTGTTACAAATTGTGACATCCCATGCACGA
AAAGCCCAATTCCGGCCAAAAAATTTGGTCCCAGCCCAGGGCAGGACTGA
CCCTACCCAAAACCCCCGGCTTTGCCTTCAAAAACCCAGGAATGGTGCCC
CCTCCCATTTAATACCGGTTTCAAGGTAATTTCCCCAACCCTCCCCCGCC
GGCCCCGGTAGGATTCTCTCCAGGACGGTTGACATGCCGTCCCCCATTTC
CGACTGGTCCCCCCCCTGCCCGGGGGACCAGTTGGGATCGTACCCTCCCC
CTTTACCCCCTCTTTCTAGTTACACAAATAAAACCCAGAAATGTGTTCCT
GAAAATCTCATATAAAAAACAACTGATCATGATTTCTCTGGCATTTTTTA
TTTCCCCCTCTCCTCCCCCCTCCCTCTCCCCTCACAACGTCTCATTCCCC
TCGCTAGCCACTCTCCGTCTGGTACCCCCCTCCTCACATCTTCCCCTTCC
CTA
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