DY270831

Overview
NameDY270831
Unique NameDY270831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 1.280e-48
Identity = 98/183 (53.55%), Postives = 126/183 (68.85%), Query Frame = 2
Query:  113 RRLLQSSS----VTPNVVVAADGSGNFKTVEAAVAAAPQ---GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            R+LLQS +    V+  V V  +G+GNF T+ AA+AAAP    G    ++I + AG+Y E VEV K  + +M IGDG  +T+ITG+R+VVDG TTF SAT  + G  F+  +IT +NTAGP+K QAVALR G DLS FY+C   AYQDTLY HS RQF+  C + GTVDFIFGNAA  + NC++
Sbjct:  230 RKLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFEAYQDTLYTHSLRQFYRECDVYGTVDFIFGNAAVVLQNCNL 412          

HSP 2 Score: 28.8758 bits (63), Expect = 1.280e-48
Identity = 15/31 (48.39%), Postives = 18/31 (58.06%), Query Frame = 3
Query:  621 VLQIVTSHARKAQFRPKNLVPAQGRTDPTQN 713
            VLQ    + R+ +    N V AQGRTDP QN
Sbjct:  406 VLQNCNLYPRQPRKGQSNEVTAQGRTDPNQN 436          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.066e-47
Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 2
Query:  137 VTPNVVVAADGSGNFKTVEAAVAAAPQ---GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            V+  V V  +G+GNF T+  AV +AP    G    ++I + +GVY ENV + K  + +M IGDG  RT++TG+RNVVDG TTF SAT AV    F+A ++TF+NTAGP KHQAVA+R  ADLS FY+C   AYQDTLY HS RQF+  C I GTVDFIFGNAA    +C++
Sbjct:  255 VSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFEAYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVFQDCNL 425          

HSP 2 Score: 29.6462 bits (65), Expect = 1.066e-47
Identity = 27/86 (31.40%), Postives = 35/86 (40.70%), Query Frame = 3
Query:  621 VLQIVTSHARKAQFRPKNLVPAQGRTDPTQNPRL----CLQKPRNGAPSHLIPVSR*FPQPSPAGPGRILSRTVDMPSPISDWSPP 866
            V Q    + R+      N + AQGRTDP QN  +    C  KP +   S    V     +     P +  SRTV M S I +   P
Sbjct:  419 VFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGR-----PWKEYSRTVFMQSYIDEVVEP 499          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 1.810e-47
Identity = 89/176 (50.57%), Postives = 123/176 (69.89%), Query Frame = 2
Query:  113 RRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            RRLLQ++ + P+V VA DG+G+  TV  AVA  P+   K ++I +K+G Y ENV + K   N+M  GDG+ +TII+GS+N VDG+ T+++AT A+ G+GF+ +DI   NTAG +KHQAVA R G+D S +Y C    +QDTLY HSNRQF+ +C + GT+DFIFG+AA     C I
Sbjct:  269 RRLLQTAGLKPDVTVAGDGTGDVLTVNEAVAKVPKKSLKMFVIYVKSGTYVENVVMDKSKWNVMIYGDGKGKTIISGSKNFVDGTPTYETATFAIQGKGFIMKDIGIINTAGAAKHQAVAFRSGSDFSVYYQCSFDGFQDTLYPHSNRQFYRDCDVTGTIDFIFGSAAVVFQGCKI 444          

HSP 2 Score: 23.8682 bits (50), Expect = 1.810e-47
Identity = 10/31 (32.26%), Postives = 18/31 (58.06%), Query Frame = 3
Query:  672 NLVPAQGRTDPTQNPRLCLQKPRNGAPSHLI 764
            N + AQG+ DP Q+  + +Q+    A  ++I
Sbjct:  455 NTITAQGKKDPNQSSGMSIQRCTISANGNVI 485          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 8.711e-47
Identity = 96/189 (50.79%), Postives = 134/189 (70.90%), Query Frame = 2
Query:   86 WPAWLSPGDRRLLQSSSV---TPNVVVAADGSGNFKTVEAAVAAAPQGGTK-RYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            +P+W+S  +RRLL S+S+   +P++VVA D SG+F++++AA+  A +   K R++I +K GVYREN++V   + NIM +GDG  +TIIT  R+V  G TT+ SAT    G+ F+A+D+TF NTAGP + QAVA+R  +DLS FY   +  +QDTLY+HS RQFF  C I+GT+DFIFGNAA    NC I
Sbjct:  257 FPSWVSRHERRLLVSASLAKSSPHLVVAQDRSGHFRSIQAAINFAARRRFKSRFVIYVKKGVYRENIDVGNDNHNIMLVGDGERKTIITSGRSVQHGYTTYNSATGGFGGQRFVAKDMTFINTAGPLRGQAVAVRSSSDLSVFYRVGIHGFQDTLYIHSQRQFFRECYISGTIDFIFGNAAVVFQNCMI 445          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 187.578 bits (475), Expect = 1.138e-46
Identity = 103/222 (46.40%), Postives = 137/222 (61.71%), Query Frame = 2
Query:    5 NMTLTDMMIMRTSNNRKLTEETSTGDGWPAWLSPGDRRLLQSSSVTP-----NVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST-TFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTK 652
            N  LT +        RKL    ST D  P W+ P  RRL+ +    P     N VVA DG+G FKT+  A+ A P+G    +II IK G+Y+E V VTKK  ++ FIGDG  +T+ITGS N   G   TF +AT+ + G+ F A++I  +NTAGP   QAVALRV AD + F++C +  +QDTLYVHS+RQF+ +C ++GTVDFIFG+A   + NC I   K
Sbjct:  208 NSNLTGLTGALAKYARKLL---STEDSIPTWVGPEARRLMAAQGGGPGPVKANAVVAQDGTGQFKTITDALNAVPKGNKVPFIIHIKEGIYKEKVTVTKKMPHVTFIGDGPNKTLITGSLNFGIGKVKTFLTATITIEGDHFTAKNIGIENTAGPEGGQAVALRVSADYAVFHSCQIDGHQDTLYVHSHRQFYRDCTVSGTVDFIFGDAKCILQNCKIVVRK 426          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 1.486e-46
Identity = 97/173 (56.07%), Postives = 118/173 (68.21%), Query Frame = 2
Query:  146 NVVVAADGSGNFKTVEAAVAAAPQG--GTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSP 658
            +VVVA DGSG++KT++ AV  A +   G+ RY+I +K GVY E V V  K  NIM  GDG  +TIITG ++   G +T+KSAT    G+GF+ RDIT +NTAGP  HQAVALR  +D+S FY C +  YQDTLYVHS RQFF  C I GTVDFIFGNAAA + NC I     P
Sbjct:  164 DVVVAQDGSGDYKTIQEAVNGAGERLKGSPRYVIHVKQGVYEEYVNVGIKSNNIMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNPP 336          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 1.507e-46
Identity = 93/172 (54.07%), Postives = 120/172 (69.77%), Query Frame = 2
Query:  131 SSVTPNVVVAADGSGNFKTVEAAVAAAPQ-GGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV-VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            S +  +V V  DG   +KTV+ AV AAP+  G ++++I+I  GVY ENV V  + KN++FIGDG  +T+ITGS N  + G TT+ +ATV VVG+GF+ARD+TFQNTAGP  HQAVA R  +D S   NC+ L  QDTLY H  RQF+ NC I G VDFIFGN+AA   +C+I
Sbjct:  235 SGLKEDVTVCKDGKCGYKTVQDAVNAAPEDNGMRKFVIKISEGVYEENVIVPFEKKNVVFIGDGMGKTVITGSLNAGMPGITTYNTATVGVVGDGFMARDLTFQNTAGPDAHQAVAFRSDSDFSLIENCEFLGNQDTLYAHGLRQFYKNCRIQGNVDFIFGNSAAVFQDCEI 406          

HSP 2 Score: 24.6386 bits (52), Expect = 1.507e-46
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 3
Query:  669 KNLVPAQGRTDPTQN 713
            KN V AQGR DP+Q+
Sbjct:  420 KNAVTAQGRIDPSQS 434          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 3.310e-46
Identity = 91/172 (52.91%), Postives = 118/172 (68.60%), Query Frame = 2
Query:  146 NVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPI 661
            +++VA DGSGNF TV  AVAAAP+ G K ++I IK G+Y+E + + KK  N+  +GDGR  T+++G  N VDG  TF SAT+AV   GF+A+D+  +NTAGP K QAVALR+  D++  Y C + AYQDTLY +S RQF+ +C I GTVDFIFG AAA    C I   K  I
Sbjct:   45 DLIVAKDGSGNFTTVNEAVAAAPENGVKPFVIYIKEGLYKEVIRIGKKKTNLTLVGDGRDLTVLSGDLNGVDGIKTFDSATLAVDESGFMAQDLCIRNTAGPEKRQAVALRISTDMTIIYRCRIDAYQDTLYAYSGRQFYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGI 216          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.323e-46
Identity = 96/197 (48.73%), Postives = 130/197 (65.99%), Query Frame = 2
Query:   92 AWLSPGDRRLLQSSSVT---PNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKK 673
            +WLS  +RR+L++  V    PN  VA DGSGNF T+ AA+ A P     RY I IK G+Y E+V + KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+A+ + F+NTAGP  HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GTVDFIFG+AAA   NCDI   K  +P +K
Sbjct:  275 SWLSNKERRMLKAVDVKALKPNATVAKDGSGNFTTINAALKAMPAKYQGRYTIYIKHGIYDESVIIDKKKPNVTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGPEGHQAVAIRVQSDRSVFLNCRFEGYQDTLYAYTHRQYYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKG-LPGQK 470          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 185.652 bits (470), Expect = 4.323e-46
Identity = 95/201 (47.26%), Postives = 132/201 (65.67%), Query Frame = 2
Query:   80 DGWPAWLSPGDRRLLQSSSVT---PNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKK 673
            DG P+W+S  DRR+L++  V    PN  VA DGSG+F T+  A+ A P+    RYII +K G+Y E V V KK  N+  +GDG  +TI+TG+++      TF +AT    GEGF+A+ + F+NTAG   HQAVA+RV +D S F NC    YQDTLY +++RQ++ +C+I GT+DFIFG+AAA   NC+I   K  +P +K
Sbjct:  276 DGIPSWVSNDDRRMLRAVDVKALKPNATVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIYDEYVTVDKKKANLTMVGDGSQKTIVTGNKSHAKKIRTFLTATFVAQGEGFMAQSMGFRNTAGSEGHQAVAIRVQSDRSIFLNCRFEGYQDTLYAYTHRQYYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKG-LPGQK 475          
The following BLAST results are available for this feature:
BLAST of DY270831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PME20_ARATH1.280e-4853.55Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME41_ARATH1.066e-4754.39Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_ARATH1.810e-4750.57Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 P... [more]
PME33_ARATH8.711e-4750.79Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME23_ARATH1.138e-4646.40Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME38_ARATH1.486e-4656.07Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME51_ARATH1.507e-4654.07Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME56_ARATH3.310e-4652.91Probable pectinesterase 56 OS=Arabidopsis thaliana... [more]
PME45_ARATH4.323e-4648.73Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH4.323e-4647.26Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YO04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270831 ID=DY270831; Name=DY270831; organism=Citrus clementina; type=EST; length=1103bp
CAAGAACATGACCCTTACTGACATGATGATCATGAGGACTTCAAACAACA
GGAAGCTGACAGAGGAGACCAGTACGGGTGATGGGTGGCCGGCTTGGCTG
TCCCCCGGCGACAGGAGGCTGTTGCAGTCGTCGTCGGTGACACCGAACGT
GGTGGTGGCGGCAGATGGCAGCGGAAACTTTAAGACGGTTGAGGCAGCGG
TGGCGGCGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAA
GCTGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATAT
AATGTTCATCGGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAA
ATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTT
GGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCC
CTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCAT
TTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCG
AACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCAT
TTTTGGTAATGCTGCAGCCCGTGTTACAAATTGTGACATCCCATGCACGA
AAAGCCCAATTCCGGCCAAAAAATTTGGTCCCAGCCCAGGGCAGGACTGA
CCCTACCCAAAACCCCCGGCTTTGCCTTCAAAAACCCAGGAATGGTGCCC
CCTCCCATTTAATACCGGTTTCAAGGTAATTTCCCCAACCCTCCCCCGCC
GGCCCCGGTAGGATTCTCTCCAGGACGGTTGACATGCCGTCCCCCATTTC
CGACTGGTCCCCCCCCTGCCCGGGGGACCAGTTGGGATCGTACCCTCCCC
CTTTACCCCCTCTTTCTAGTTACACAAATAAAACCCAGAAATGTGTTCCT
GAAAATCTCATATAAAAAACAACTGATCATGATTTCTCTGGCATTTTTTA
TTTCCCCCTCTCCTCCCCCCTCCCTCTCCCCTCACAACGTCTCATTCCCC
TCGCTAGCCACTCTCCGTCTGGTACCCCCCTCCTCACATCTTCCCCTTCC
CTA
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