DY270831

Overview
NameDY270831
Unique NameDY270831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.802e-45
Identity = 104/222 (46.85%), Postives = 141/222 (63.51%), Query Frame = 2
Query:   20 DMMIMRTSNNRKLTEETSTGDGWPAWL-SPGDRRLLQSSSVTPNV--VVAADGSGNFKTV-EAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKK 673
            D+ +   S +RKL    S  + +P ++ S   RRLL++     NV  VVA DGSG  KT+ EA ++ +      R  I +KAG Y EN+ +  K KN+M +GDG+ +T+I GSR+   G TT+K+ATVA +GEGF+ARD+TF N AGP   QAVALRVGAD S  + C +  YQD+LY HS RQF+    I GTVDFIFGN+A    +C+I   K P+P ++
Sbjct:  171 DLFVSVKSKHRKLL---SKQEYFPTFVPSSEQRRLLEAPVEELNVDAVVAPDGSGTHKTIGEALLSTSLASSGGRTKIYLKAGTYHENINIPTKQKNVMLVGDGKGKTVIVGSRSNRGGWTTYKTATVAAMGEGFIARDMTFVNNAGPKSEQAVALRVGADKSVVHRCSVEGYQDSLYTHSKRQFYRETDITGTVDFIFGNSAVVFQSCNIAARK-PLPGQR 388          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 5.285e-44
Identity = 98/208 (47.12%), Postives = 129/208 (62.02%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLLQSSS------------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTN 631
            R+L E+     G P W+S  DR+L+  +             V  N VVA DGSG FKTV+ AV A P+    R II IKAG+YRE V + KK  NI   GDG  +T+I+ +R+V    G+TT  SATV V  EGF+A+ + F+NTAGP  HQA A+RV  D +  +NC    YQDTLYV++ RQF+ NC+++GTVDFIFG +A  + N
Sbjct:  233 RRLLEDIDE-TGIPTWVSGADRKLMAKAGRGRRGGRGGGARVRTNFVVAKDGSGQFKTVQQAVDACPENNRGRCIIYIKAGLYREQVIIPKKKNNIFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQN 439          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 6.902e-44
Identity = 103/211 (48.82%), Postives = 129/211 (61.14%), Query Frame = 2
Query:   29 IMRTSNNRKLTEETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKR---YIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTK 652
            + +T +N K   +TS   G     S G      S  V+  V+V    S NF T+  A+AAAP         ++I  + GVY E + V    KN+M +GDG  +TIITG+ NVVDG TT+  ++ AVVGE F+A D+TF+NTAGP KHQAVALR  A+ S+FY C    YQDTLYVHS RQF+  C I GTVDFIFGNAAA   NC+I   K
Sbjct:  269 LRKTCDNDKDCRKTSRNLGELGETSGG------SILVSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAAIFQNCNIYARK 473          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 2.008e-43
Identity = 94/197 (47.72%), Postives = 122/197 (61.93%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            R  TE  S     P+WL   D++ L  ++   +VVVA DG+G + TV AA+AAAPQ   KR++I IK G+Y E V +     N+  IGDG+  TIITG+ +  +   T+ +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA A    C I
Sbjct:  156 RDNTELISVIPNGPSWLFHVDKKDLYLNAEIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQI 352          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 3.426e-43
Identity = 103/225 (45.78%), Postives = 127/225 (56.44%), Query Frame = 2
Query:   83 GWPAWLSPGDRRLLQSSS-------------------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKKFGPSPGQ 694
            G P W S  DR+L+  +                    + P  VVA DGSG FKT+  AV A P+    R II IKAGVY+E V + KK  N+   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I FQNTAGP  HQAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A  + N  I C K          SPGQ
Sbjct:  232 GLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKG---------SPGQ 447          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 5.843e-43
Identity = 95/191 (49.74%), Postives = 121/191 (63.35%), Query Frame = 2
Query:  149 VVVAADGSGNFKTVEAAVAAAPQGGTKR---YIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKKFGPSPGQD*PYPK 712
            V V    + NF T+  AVAAAP         ++I  +AG+Y E V ++ K +NIM IGDG  +TII+G+ + +DG TT+ S+T AVVG+ F+A D+TF+NTAGP KHQAVA+R  AD S FY C    YQDTLYVHS RQF+  C I GT+DFIFGNAAA   NC+I   K     K    + G+  P  K
Sbjct:  308 VTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQK 498          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2)

HSP 1 Score: 174.866 bits (442), Expect = 7.631e-43
Identity = 96/205 (46.83%), Postives = 127/205 (61.95%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLLQSSS---------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTN 631
            R+L E+     G P W+S  DR+L+  +          +    VVA DGSG FKTV+ AV A P+    R II IKAG+YRE V + KK  NI   GDG  +T+I+ +R+V    G+TT  S TV V  EGF+A+ I F+NTAGP  HQAVA+RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A  + N
Sbjct:  243 RRLLEDIDE-TGIPTWVSGADRKLMTKAGRGSNDGGARIRATFVVAKDGSGQFKTVQQAVNACPEKNPGRCIIHIKAGIYREQVIIPKKKNNIFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQN 446          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 1.302e-42
Identity = 92/174 (52.87%), Postives = 119/174 (68.39%), Query Frame = 2
Query:  131 SSVTPNVVVAADGSGN--FKTVEAAVAAAPQGG-TKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVD-GSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            S +T +V V  +G  +  +KTV+ AV +AP    T +++IRI+ GVY E V V  + KN++FIGDG  +T+ITGS NV   G TTF+SATV V+G+GF+ARD+T +NTAG   HQAVA R  +D S   NC+ L  QDTLY HS RQF+  C I G VDFIFGN+AA   +CDI
Sbjct:  283 SGLTEDVTVCKNGGKDCKYKTVQEAVDSAPDTNRTVKFVIRIREGVYEETVRVPFEKKNVVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDI 456          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 6.460e-42
Identity = 95/201 (47.26%), Postives = 122/201 (60.70%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLL----QSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            R  TE  S     P+WLS  D++ L    ++     +VVVA DG+G + TV AA+AAAPQ   KR+II IK G+Y E V +     N+  IGDG+  TIITG+ +  +   TF +AT A  G+GF+  D+ F+NT GP+K  AVALRV  D+S  Y C +  YQD LY H +RQF+  C I GTVDFI GNAAA    C I
Sbjct:  179 RDNTELNSVVPNSPSWLSHVDKKDLYLNAEALKKIADVVVAKDGTGKYNTVNAAIAAAPQHSHKRFIIYIKTGIYDEIVAIENTKPNLTLIGDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQI 379          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 6.460e-42
Identity = 104/237 (43.88%), Postives = 130/237 (54.85%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLLQSSS--------------------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVV--DGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKKFGPSPGQ 694
            R+L E+  +  G P W S  DR+L+  +                     +    VVA DGSG FKT+  AV A P     R II IKAG+Y E V + KK  NI   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I F+NTAGP  HQAVALRV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFIFG +A  + N  I   K          SPGQ
Sbjct:  225 RRLLEDNDS-KGLPKWFSGKDRKLMAKAGRGAPAGGDDGIGEGGGGGGKIKATHVVAKDGSGQFKTISEAVMACPDKNPGRCIIHIKAGIYNEQVRIPKKKNNIFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKG---------SPGQ 451          
The following BLAST results are available for this feature:
BLAST of DY270831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PME16_ARATH2.802e-4546.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME4_ARATH5.285e-4447.12Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 P... [more]
PME25_ARATH6.902e-4448.82Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME30_ARATH2.008e-4347.72Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME_BRANA3.426e-4345.78Probable pectinesterase/pectinesterase inhibitor O... [more]
PME47_ARATH5.843e-4349.74Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME5_ARATH7.631e-4346.83Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 P... [more]
PME64_ARATH1.302e-4252.87Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME42_ARATH6.460e-4247.26Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME37_ARATH6.460e-4243.88Probable pectinesterase/pectinesterase inhibitor V... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YO04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270831 ID=DY270831; Name=DY270831; organism=Citrus clementina; type=EST; length=1103bp
CAAGAACATGACCCTTACTGACATGATGATCATGAGGACTTCAAACAACA
GGAAGCTGACAGAGGAGACCAGTACGGGTGATGGGTGGCCGGCTTGGCTG
TCCCCCGGCGACAGGAGGCTGTTGCAGTCGTCGTCGGTGACACCGAACGT
GGTGGTGGCGGCAGATGGCAGCGGAAACTTTAAGACGGTTGAGGCAGCGG
TGGCGGCGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAA
GCTGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATAT
AATGTTCATCGGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAA
ATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTT
GGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCC
CTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCAT
TTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCG
AACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCAT
TTTTGGTAATGCTGCAGCCCGTGTTACAAATTGTGACATCCCATGCACGA
AAAGCCCAATTCCGGCCAAAAAATTTGGTCCCAGCCCAGGGCAGGACTGA
CCCTACCCAAAACCCCCGGCTTTGCCTTCAAAAACCCAGGAATGGTGCCC
CCTCCCATTTAATACCGGTTTCAAGGTAATTTCCCCAACCCTCCCCCGCC
GGCCCCGGTAGGATTCTCTCCAGGACGGTTGACATGCCGTCCCCCATTTC
CGACTGGTCCCCCCCCTGCCCGGGGGACCAGTTGGGATCGTACCCTCCCC
CTTTACCCCCTCTTTCTAGTTACACAAATAAAACCCAGAAATGTGTTCCT
GAAAATCTCATATAAAAAACAACTGATCATGATTTCTCTGGCATTTTTTA
TTTCCCCCTCTCCTCCCCCCTCCCTCTCCCCTCACAACGTCTCATTCCCC
TCGCTAGCCACTCTCCGTCTGGTACCCCCCTCCTCACATCTTCCCCTTCC
CTA
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