DY270831

Overview
NameDY270831
Unique NameDY270831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 170.244 bits (430), Expect = 1.880e-41
Identity = 94/201 (46.77%), Postives = 121/201 (60.20%), Query Frame = 2
Query:   50 RKLTEETSTGDGWPAWLSPGDRRLL----QSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            R  TE  S     P+WL   D++ L    ++     +VVVA DG+G + TV AA+AAAPQ   KR++I IK G+Y E V +     N+  IGDG+  TIIT + +  +   TF +ATVA  G GF+  D+ F+NTAGP+K  AVALRV  D+S  Y C +  YQD LY HS+RQF+  C I GTVDFI GNA A    C I
Sbjct:  179 RDNTELISVIPNSPSWLFHVDKKDLYLNAEALKKIADVVVAKDGTGKYSTVNAAIAAAPQHSQKRFVIYIKTGIYDEIVVIENTKPNLTLIGDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQI 379          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.455e-41
Identity = 101/225 (44.89%), Postives = 126/225 (56.00%), Query Frame = 2
Query:   83 GWPAWLSPGDRRLLQSSS-------------------VTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV--VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKKFGPSPGQ 694
            G P W S  DR+L+  +                    + P  VVA DGSG FKT+  AV A P+    R II IKAGVY+E V + KK  N+   GDG T+TIIT  R+V    G+TT  S TV V  EGF+A+ I FQNTAGP  +QAVA RV  D +  +NC    YQDTLYV++ RQF+ N +++GTVDFI G +A  + N  I C K          SPGQ
Sbjct:  219 GLPKWHSDKDRKLMAQAGRPGAPADEGIGEGGGGGGKIKPTHVVAKDGSGQFKTISEAVKACPEKNPGRCIIYIKAGVYKEQVTIPKKVNNVFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKG---------SPGQ 434          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 9.350e-33
Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 2
Query:  134 SVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV----------VDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPC 646
            + T  V V+ DGSG++ +V+ A+ + P G T R +IR+  G+YR+ V V K+   I F G     T++T +             V G+ TF   +V V GE F+A +ITF+N+A     QAVA+RV AD  AFYNC  L +QDTLY+H  +Q+  +C I G+VDFIFGN+ A + +C I C
Sbjct:    2 ATTRMVRVSQDGSGDYCSVQDAIDSVPLGNTCRTVIRLSPGIYRQPVYVPKRKNFITFAGISPEITVLTWNNTASKIEHHQASRVIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHC 182          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2)

HSP 1 Score: 140.584 bits (353), Expect = 1.595e-32
Identity = 78/188 (41.49%), Postives = 106/188 (56.38%), Query Frame = 2
Query:   89 PAWLSPGDRRLLQSSSVT----PNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            P+WLS  D++ L  +  T     +++VA D +GN+  V  A+AAAPQ   KR++I IK  +Y E V +     N+  I DG+  TIIT + +  +   TF +AT A  G+GF+  D+ F+NT  P K   V LRV  D+S  Y C +  YQD LY H NRQ +    +  TVDFI GNAAA    C I
Sbjct:   54 PSWLSHVDKKDLYLNDETLKKITDILVAKDVTGNYNIVNVAIAAAPQHSQKRFVIYIKTSIYVEIVVIGNMKSNLTLIADGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQI 241          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 3.326e-30
Identity = 80/212 (37.74%), Postives = 115/212 (54.25%), Query Frame = 2
Query:    5 NMTLTDMMIMRTSNNRKLTEETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            ++TL D ++    N +  T+ T+     P W++ G+RRLL   +   +VVVA DGSG+++TV  AV AA                                 G+G+  T+I G  +   G++   +AT+ V G+GF+ARDI  +N AGP  HQA+AL + +D S  Y C +  YQDTLY  + RQF+  C I GT+DFIFGNAAA   +C+I
Sbjct:  190 SLTLVDTIM---KNPKPKTKSTAL----PRWVTAGERRLLVGRA-RAHVVVAKDGSGDYRTVMEAVTAAH--------------------------------GNGKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNI 361          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 2.088e-24
Identity = 65/167 (38.92%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  155 VAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            V+ +G G FK V+ A+ A+      + +I I  G+YRE   V +   N++  G G +RT I  +      + TF S +VAV GE F A +I+F+NTA     G    QAVAL+V  D +AFY C     QDTL     R FF  C I G++DFIFGN  +   +C +
Sbjct:   44 VSLNGCGRFKRVQDAIDASIGSSQSKTLILIDFGIYRERFIVHENKNNLVVQGMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTL 210          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 7.934e-24
Identity = 71/197 (36.04%), Postives = 99/197 (50.25%), Query Frame = 2
Query:   65 ETSTGDGWPAWLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            + S  D +P  + P D      +  T  + V  +G  NF TV++AV A      +R +I I +G+Y E V + K   NI   G G   T I  +      + TF  ATV V G  F+A++I+F N A     G    QAVA+R+  D SAF  C     QDTL+    R +F +C I G++DFIFGNA +   +C I
Sbjct:   69 KVSICDDFPKNIPPLD------TDTTSYLCVDKNGCCNFTTVQSAVDAVGNFSQRRNVIWINSGMYYEKVVIPKTKPNITLQGQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRI 259          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.036e-23
Identity = 74/207 (35.75%), Postives = 107/207 (51.69%), Query Frame = 2
Query:   95 WLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTR--TIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNT----AGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDIPCTKSPIPAKKFG 679
            W++        +++V   +VV  +G G+  TV+ AV   P   ++R  I I  G+YRE V V K    I FIG+      T+I+ S    D         T+++A+V++  + F A  ITF+NT    AG    QAVALR+  D + FY   +L  QDTL+  +   +F  C I G VDFIFGNA +   +CDI  T     AK++G
Sbjct:   64 WVTTNANANANATNVRRVIVVDKNGGGDSVTVQGAVDMVPDSNSQRVKIFILPGIYREKVIVPKSKPYISFIGNESYAGDTVISWSDKASDLGCDGKELGTYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDIHST-----AKRYG 265          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.954e-22
Identity = 62/167 (37.13%), Postives = 90/167 (53.89%), Query Frame = 2
Query:  173 GNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            G+F  ++ A+ + P     R +I++ AGVY+E V +      I   G+G  +T +          +      T+ SA+ AV    F+A++ITF+NT      G    QAVALRV AD +AF+ C ML  QDTLY H  R ++ +C I G+VDFIFGNA +    C +
Sbjct:   94 GDFTKIQDAIDSLPLINFVRVVIKVHAGVYKEKVSIPPLKAFITIEGEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHV 260          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME67_ARATH (Probable pectinesterase 67 OS=Arabidopsis thaliana GN=PME67 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 2.552e-22
Identity = 57/179 (31.84%), Postives = 99/179 (55.31%), Query Frame = 2
Query:  119 LLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAG-----PSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            L +  +   +++V  +G G++ +V+ A+ A P G +   I+ ++ G+Y+E V + +    I   G+G+ +T+I  S++ VD      SAT  V    F+A  I+ +N A       S++Q+VA  V AD  AFY+C   +  +TL+ +  R ++  C I G++DFIFG A +   NC+I
Sbjct:   36 LTEKIATNRSIIVDIEGKGDYTSVQKAIDAVPVGNSNWIIVHVRKGIYKERVHIPENKPFIFMRGNGKGKTVIESSQSSVDNVA---SATFKVEANHFVAFGISIRNDAPVGMAFTSENQSVAAFVAADKVAFYHCAFYSLHNTLFDNKGRHYYHECYIQGSIDFIFGRATSIFNNCEI 211          
The following BLAST results are available for this feature:
BLAST of DY270831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PME19_ARATH1.880e-4146.77Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_BRACM2.455e-4144.89Pectinesterase/pectinesterase inhibitor (Fragment)... [more]
PME31_ARATH9.350e-3341.99Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31... [more]
PME57_ARATH1.595e-3241.49Putative pectinesterase 57 OS=Arabidopsis thaliana... [more]
PME54_ARATH3.326e-3037.74Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME14_ARATH2.088e-2438.92Putative pectinesterase 14 OS=Arabidopsis thaliana... [more]
PME8_ARATH7.934e-2436.04Probable pectinesterase 8 OS=Arabidopsis thaliana ... [more]
PME62_ARATH1.036e-2335.75Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT... [more]
PME53_ARATH1.954e-2237.13Probable pectinesterase 53 OS=Arabidopsis thaliana... [more]
PME67_ARATH2.552e-2231.84Probable pectinesterase 67 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YO04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270831 ID=DY270831; Name=DY270831; organism=Citrus clementina; type=EST; length=1103bp
CAAGAACATGACCCTTACTGACATGATGATCATGAGGACTTCAAACAACA
GGAAGCTGACAGAGGAGACCAGTACGGGTGATGGGTGGCCGGCTTGGCTG
TCCCCCGGCGACAGGAGGCTGTTGCAGTCGTCGTCGGTGACACCGAACGT
GGTGGTGGCGGCAGATGGCAGCGGAAACTTTAAGACGGTTGAGGCAGCGG
TGGCGGCGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAA
GCTGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATAT
AATGTTCATCGGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAA
ATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTT
GGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCC
CTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCAT
TTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCG
AACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCAT
TTTTGGTAATGCTGCAGCCCGTGTTACAAATTGTGACATCCCATGCACGA
AAAGCCCAATTCCGGCCAAAAAATTTGGTCCCAGCCCAGGGCAGGACTGA
CCCTACCCAAAACCCCCGGCTTTGCCTTCAAAAACCCAGGAATGGTGCCC
CCTCCCATTTAATACCGGTTTCAAGGTAATTTCCCCAACCCTCCCCCGCC
GGCCCCGGTAGGATTCTCTCCAGGACGGTTGACATGCCGTCCCCCATTTC
CGACTGGTCCCCCCCCTGCCCGGGGGACCAGTTGGGATCGTACCCTCCCC
CTTTACCCCCTCTTTCTAGTTACACAAATAAAACCCAGAAATGTGTTCCT
GAAAATCTCATATAAAAAACAACTGATCATGATTTCTCTGGCATTTTTTA
TTTCCCCCTCTCCTCCCCCCTCCCTCTCCCCTCACAACGTCTCATTCCCC
TCGCTAGCCACTCTCCGTCTGGTACCCCCCTCCTCACATCTTCCCCTTCC
CTA
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