DY270831

Overview
NameDY270831
Unique NameDY270831
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 9.699e-22
Identity = 59/169 (34.91%), Postives = 83/169 (49.11%), Query Frame = 2
Query:  149 VVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            + V   G GNF  V++A+   P   + + +I + +G YRE V V +   N++  G G   T I  +        T  S +  V    F A +I+F+N A     G +  QAVALR+  D +AFY C     QDTL     R FF  C I G++DFIFGN  +   +C I
Sbjct:   91 LTVDLHGCGNFSNVQSAIDVVPDLSSSKTLIIVNSGSYREKVTVNENKTNLVIQGRGYQNTSIEWNDTAKSAGNTADSFSFVVFAANFTAYNISFKNNAPEPDPGEADAQAVALRIEGDQAAFYGCGFYGAQDTLLDDKGRHFFKECFIQGSIDFIFGNGRSLYQDCTI 259          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME50_ARATH (Probable pectinesterase 50 OS=Arabidopsis thaliana GN=PME50 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 2.161e-21
Identity = 61/168 (36.31%), Postives = 85/168 (50.60%), Query Frame = 2
Query:  149 VVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGP----SKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            + V   G  NFKT+  A+ + P G   R II++  GVY E V +      I  +G     T++T         T  +SAT+ V  E F A  +T +NTA      S+ QA+A+R+ AD +AFY+C    +QDTL       FF +C I GT DFIFG  A+   N  +
Sbjct:   67 ITVNQKGGANFKTLNEAIKSIPTGNKNRVIIKLAPGVYNEKVTIDIARPFITLLGQPGAETVLTYHGTAAQYGTV-ESATLIVWAEYFQAAHLTIKNTAPMPKPGSQGQALAMRINADKAAFYSCRFHGFQDTLCDDKGNHFFKDCYIEGTYDFIFGRGASLYLNTQL 233          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME49_ARATH (Probable pectinesterase 49 OS=Arabidopsis thaliana GN=PME49 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 6.286e-21
Identity = 58/161 (36.02%), Postives = 83/161 (51.55%), Query Frame = 2
Query:  149 VVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKH----QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAA 619
            ++V  +G G+FKT+ AA+ + P     R II++  G+Y E V V      +  +G     T +T +       T  +SAT+ V    FLA ++   NT+   K     QA+A+R+  D +AFYNC    +QDTL       FF NC I GT DFIFG  A+
Sbjct:   67 IIVNQNGGGDFKTINAAIKSIPLANKNRVIIKLAPGIYHEKVTVDVGRPYVTLLGKPGAETNLTYAGTAAKYGTV-ESATLIVWATNFLAANLNIINTSPMPKPGTQGQALAMRINGDKAAFYNCRFYGFQDTLCDDRGNHFFKNCYIEGTYDFIFGRGAS 226          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PMEA_ERWCH (Pectinesterase A OS=Erwinia chrysanthemi GN=pemA PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 2.389e-20
Identity = 70/194 (36.08%), Postives = 102/194 (52.58%), Query Frame = 2
Query:  131 SSVTPNVVVAADGSGN--FKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV----VDGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            ++ T N VV+   S    FKT+  A+A+AP G T  ++I IK GVY E + +T+   N++  G+ R   +I  +        DGS   T  S+T+ +  + F A+ +T +N     A  +K           QAVAL V    D + F +  ++ YQDTLYV   R FF +C I+GTVDFIFG+  A   NCD+
Sbjct:   24 AATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTP-FVILIKNGVYNERLTITRN--NLLLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDL 214          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME48_ARATH (Probable pectinesterase 48 OS=Arabidopsis thaliana GN=PME48 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 2.389e-20
Identity = 57/175 (32.57%), Postives = 93/175 (53.14%), Query Frame = 2
Query:  122 LQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST----TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAA 619
            L ++   P ++      G FKT+  A+ + P G TKR II++  G YRE V + +    I  +G      +IT      DG+     T  SA++ ++ + F+A +I  +NTA    G +K  QA+++R+  + +AFYNC    +QDT+   +   FF +C + GT DFIFG+  +
Sbjct:   57 LVAAEAAPRIINVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAHGEYREKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTS 226          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 3.120e-20
Identity = 63/193 (32.64%), Postives = 91/193 (47.15%), Query Frame = 2
Query:   95 WLSPGDRRLLQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST------TFKSATVAVVGEGFLARDITFQNTA-----GPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            W+ P   ++         + V+ +G   F++V+ AV + P+   K   I+I  G YRE V V      I F G GR  T I       D         T+++A+V V    F AR+I+F NTA     G    QAVA R+  D + F  C     QDTL   + R +F  C I G++DFIFGN  +   +C++
Sbjct:   52 WVGPSGHKV---------ITVSLNGHAQFRSVQDAVDSIPKNNNKSITIKIAPGFYREKVVVPATKPYITFKGAGRDVTAIEWHDRASDLGANGQQLRTYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL 235          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PPME1_ARATH (Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PPME1 PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.075e-20
Identity = 56/175 (32.00%), Postives = 93/175 (53.14%), Query Frame = 2
Query:  122 LQSSSVTPNVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGST----TFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAA 619
            L ++   P ++      G FKT+  A+ + P G TKR II++  G Y+E V + +    I  +G      +IT      DG+     T  SA++ ++ + F+A +I  +NTA    G +K  QA+++R+  + +AFYNC    +QDT+   +   FF +C + GT DFIFG+  +
Sbjct:   57 LVAAEAAPRIINVNPKGGEFKTLTDAIKSVPAGNTKRVIIKMAPGEYKEKVTIDRNKPFITLMGQPNAMPVIT-----YDGTAAKYGTVDSASLIILSDYFMAVNIVVKNTAPAPDGKTKGAQALSMRISGNFAAFYNCKFYGFQDTICDDTGNHFFKDCYVEGTFDFIFGSGTS 226          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PMEA_DICD3 (Pectinesterase A OS=Dickeya dadantii (strain 3937) GN=pemA PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 6.951e-20
Identity = 70/194 (36.08%), Postives = 101/194 (52.06%), Query Frame = 2
Query:  131 SSVTPNVVVAADGSGN--FKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNV----VDGST--TFKSATVAVVGEGFLARDITFQNT----AGPSKH----------QAVALRV--GADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            ++ T N VV+   S    FKT+  A+A+AP G T  ++I IK GVY E + +T+   N+   G+ R   +I  +        DGS   T  S+T+ +  + F A+ +T +N     A  +K           QAVAL V    D + F +  ++ YQDTLYV   R FF +C I+GTVDFIFG+  A   NCD+
Sbjct:   24 AATTYNAVVSKSSSDGKTFKTIADAIASAPAGSTP-FVILIKNGVYNERLTITRN--NLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITISAKDFSAQSLTIRNDFDFPANQAKSDSDSSKIKDTQAVALYVTKSGDRAYFKDVSLVGYQDTLYVSGGRSFFSDCRISGTVDFIFGDGTALFNNCDL 214          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME63_ARATH (Putative pectinesterase 63 OS=Arabidopsis thaliana GN=PME63 PE=3 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 9.078e-20
Identity = 57/160 (35.62%), Postives = 86/160 (53.75%), Query Frame = 2
Query:  146 NVVVAADGSGNFKTVEAAVAAAPQGGTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTA----GPSKH-QAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGN 610
            N  V  +G G+FKT+  A+ +   G T+R II+I  GVY+E V + +    I   G      ++T         T   SAT+ V+ + F+A +I  +N+A    G  K  QA+++R+  + +AFYNC    YQDT+   +   FF +C I GT DFIFG+
Sbjct:   42 NTNVKQNGRGHFKTITEAINSVRAGNTRRVIIKIGPGVYKEKVTIDRSKPFITLYGHPNAMPVLTFDGTAAQYGTV-DSATLIVLSDYFMAVNIILKNSAPMPDGKRKGAQALSMRISGNKAAFYNCKFYGYQDTICDDTGNHFFKDCYIEGTFDFIFGS 200          
BLAST of DY270831 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 1.186e-19
Identity = 56/164 (34.15%), Postives = 85/164 (51.83%), Query Frame = 2
Query:  155 VAADGSGNFKTVEAAVAAAPQG--GTKRYIIRIKAGVYRENVEVTKKHKNIMFIGDGRTRTIITGSRNVVDGSTTFKSATVAVVGEGFLARDITFQNTAGPSKHQAVALRVGADLSAFYNCDMLAYQDTLYVHSNRQFFVNCLIAGTVDFIFGNAAARVTNCDI 640
            V   G G+F  ++ A+ + P     ++ Y I +K G+YRE V +  +   I   G   + T +  S    DG    +S T+ +    F+ R +T QN  G +  +AVALRV AD +AFY C + +YQDTL   +   +F NC I G  DFI G+A++    C +
Sbjct:   53 VDQSGKGDFSKIQEAIESIPPNLNNSQLYFIWVKPGIYREKVVIPAEKPYITLSGTQASNTFLIWS----DGEDILESPTLTIFASDFVCRFLTIQNKFGTAG-RAVALRVAADKAAFYGCVITSYQDTLLDDNGNHYFKNCYIEGATDFICGSASSLYERCHL 211          
The following BLAST results are available for this feature:
BLAST of DY270831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PME15_ARATH9.699e-2234.91Probable pectinesterase 15 OS=Arabidopsis thaliana... [more]
PME50_ARATH2.161e-2136.31Probable pectinesterase 50 OS=Arabidopsis thaliana... [more]
PME49_ARATH6.286e-2136.02Probable pectinesterase 49 OS=Arabidopsis thaliana... [more]
PMEA_ERWCH2.389e-2036.08Pectinesterase A OS=Erwinia chrysanthemi GN=pemA P... [more]
PME48_ARATH2.389e-2032.57Probable pectinesterase 48 OS=Arabidopsis thaliana... [more]
PME68_ARATH3.120e-2032.64Probable pectinesterase 68 OS=Arabidopsis thaliana... [more]
PPME1_ARATH4.075e-2032.00Pectinesterase PPME1 OS=Arabidopsis thaliana GN=PP... [more]
PMEA_DICD36.951e-2036.08Pectinesterase A OS=Dickeya dadantii (strain 3937)... [more]
PME63_ARATH9.078e-2035.63Putative pectinesterase 63 OS=Arabidopsis thaliana... [more]
PME11_ARATH1.186e-1934.15Putative pectinesterase 11 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YO04FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270831 ID=DY270831; Name=DY270831; organism=Citrus clementina; type=EST; length=1103bp
CAAGAACATGACCCTTACTGACATGATGATCATGAGGACTTCAAACAACA
GGAAGCTGACAGAGGAGACCAGTACGGGTGATGGGTGGCCGGCTTGGCTG
TCCCCCGGCGACAGGAGGCTGTTGCAGTCGTCGTCGGTGACACCGAACGT
GGTGGTGGCGGCAGATGGCAGCGGAAACTTTAAGACGGTTGAGGCAGCGG
TGGCGGCGGCTCCTCAGGGAGGCACTAAGCGGTATATTATTAGGATTAAA
GCTGGTGTTTATCGGGAAAATGTTGAGGTGACAAAGAAGCATAAAAATAT
AATGTTCATCGGTGACGGAAGGACTAGAACTATCATCACAGGAAGTAGAA
ATGTGGTTGATGGAAGCACAACTTTCAAGTCTGCTACAGTTGCTGTTGTT
GGTGAAGGATTCTTGGCCCGAGACATTACATTCCAAAACACAGCAGGCCC
CTCAAAGCACCAGGCAGTGGCACTGCGAGTGGGAGCTGACCTTTCAGCAT
TTTACAATTGCGATATGTTAGCTTACCAAGACACACTCTACGTCCACTCG
AACCGCCAGTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCAT
TTTTGGTAATGCTGCAGCCCGTGTTACAAATTGTGACATCCCATGCACGA
AAAGCCCAATTCCGGCCAAAAAATTTGGTCCCAGCCCAGGGCAGGACTGA
CCCTACCCAAAACCCCCGGCTTTGCCTTCAAAAACCCAGGAATGGTGCCC
CCTCCCATTTAATACCGGTTTCAAGGTAATTTCCCCAACCCTCCCCCGCC
GGCCCCGGTAGGATTCTCTCCAGGACGGTTGACATGCCGTCCCCCATTTC
CGACTGGTCCCCCCCCTGCCCGGGGGACCAGTTGGGATCGTACCCTCCCC
CTTTACCCCCTCTTTCTAGTTACACAAATAAAACCCAGAAATGTGTTCCT
GAAAATCTCATATAAAAAACAACTGATCATGATTTCTCTGGCATTTTTTA
TTTCCCCCTCTCCTCCCCCCTCCCTCTCCCCTCACAACGTCTCATTCCCC
TCGCTAGCCACTCTCCGTCTGGTACCCCCCTCCTCACATCTTCCCCTTCC
CTA
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