DY270863 | Citrus Genome Database

Overview


Name	DY270863
Unique Name	DY270863
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1135

Libraries


Library Name	Type
Fruit-TF	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_CAMDR (Ubiquitin OS=Camelus dromedarius PE=3 SV=2)

HSP 1 Score: 145.976 bits (367), Expect = 3.932e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.932e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 131.724 bits (330), Expect = 7.673e-30
Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_BOVIN (Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 3.932e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.976 bits (367), Expect = 3.932e-34
Identity = 73/76 (96.05%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 131.724 bits (330), Expect = 7.673e-30
Identity = 68/73 (93.15%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_TETPY (Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.135e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 145.591 bits (366), Expect = 5.135e-34
Identity = 72/76 (94.74%), Postives = 76/76 (100.00%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITL+VE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 131.339 bits (329), Expect = 1.002e-29
Identity = 67/73 (91.78%), Postives = 70/73 (95.89%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITL+VE+SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLDVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_SHEEP (Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2)

HSP 1 Score: 145.206 bits (365), Expect = 6.707e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 2 Score: 145.206 bits (365), Expect = 6.707e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

HSP 3 Score: 130.954 bits (328), Expect = 1.309e-29
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLR+
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRM 73

HSP 4 Score: 72.0182 bits (175), Expect = 7.215e-12
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLR+RGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRMRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_EIMBO (Ubiquitin OS=Eimeria bovis PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 8.759e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.821 bits (364), Expect = 8.759e-34
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITL+VE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 130.568 bits (327), Expect = 1.709e-29
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITL+VE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_TRYBB (Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTI LEVE+SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 130.183 bits (326), Expect = 2.233e-29
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTI LEVE+SDTI NVKAKIQDKEGIPPDQQRLIFAGK LE+GRTLADYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTIALEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLADYNIQKESTLHLVLRL 73

HSP 4 Score: 72.4034 bits (176), Expect = 5.525e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLE+GRTLADYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEEGRTLADYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_STRPU (Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 130.183 bits (326), Expect = 2.233e-29
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SD+I NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 75/76 (98.68%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SD+I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 130.183 bits (326), Expect = 2.233e-29
Identity = 67/73 (91.78%), Postives = 69/73 (94.52%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SD+I NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 144.436 bits (363), Expect = 1.144e-33
Identity = 72/76 (94.74%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITLEVE SD I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 130.183 bits (326), Expect = 2.233e-29
Identity = 67/73 (91.78%), Postives = 68/73 (93.15%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITLEVE SD I NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLEVEGSDNIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.328e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.895 bits (359), Expect = 3.328e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTITL+VE SD+IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 127.487 bits (319), Expect = 1.447e-28
Identity = 65/73 (89.04%), Postives = 68/73 (93.15%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTITL+VE SD+I NVK KIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 72.7886 bits (177), Expect = 4.230e-12
Identity = 35/36 (97.22%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76

The following BLAST results are available for this feature:

BLAST of DY270863 vs. ExPASy Swiss-Prot

BLAST of DY270863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_CAMDR	3.932e-34	96.05	Ubiquitin OS=Camelus dromedarius PE=3 SV=2	[more]
UBIQ_BOVIN	3.932e-34	96.05	Ubiquitin OS=Bos taurus GN=RPS27A PE=1 SV=1	[more]
UBIQ_TETPY	5.135e-34	94.74	Ubiquitin OS=Tetrahymena pyriformis GN=TUF11 PE=3 ...	[more]
UBIQ_SHEEP	6.707e-34	94.74	Ubiquitin OS=Ovis aries GN=UBA52 PE=3 SV=2	[more]
UBIQ_EIMBO	8.759e-34	94.74	Ubiquitin OS=Eimeria bovis PE=2 SV=1	[more]
UBIQ_TRYBB	1.144e-33	94.74	Ubiquitin OS=Trypanosoma brucei brucei PE=3 SV=1	[more]
UBIQ_STRPU	1.144e-33	94.74	Ubiquitin OS=Strongylocentrotus purpuratus PE=3 SV...	[more]
UBIQ_ENCCU	1.144e-33	94.74	Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_074...	[more]
UBIQ_DICDI	1.144e-33	94.74	Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1...	[more]
UBIQ_PHYIN	3.328e-33	93.42	Ubiquitin OS=Phytophthora infestans PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	KN0AAP7YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY270863 ID=DY270863; Name=DY270863; organism=Citrus clementina; type=EST; length=1135bp
CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGC
TGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCC
GTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACC
CTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAATTCA
GGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCCGGTA
AACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGAAGGAA
TCAACCCTTCATTTGGTCCTCCGTCTCAGGGGTGGCATGCAGATTTTTGT
GAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACA
CGATCGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATCCCACCT
GATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTAC
TCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTC
GTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACA
ATTACTCTTGAGGTTGAAAGTTCTGACACCATCGGCAACGTGAAAGCAAA
AATTCAGGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTG
CTGGAAAGCCGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAG
AAAGAATCCACTCTTCCCTTGGTTCTTCGCCTCCTGGTGGTATGCAAATT
TTGTGAAGACCCTCCCGGGGAAAACCCTCCCATTGGAGGTTAAAAGTTCG
GAACCCATTGAACAAGTGAAGGGCAAAAATCCCGAAAAAGGAGGGGAATT
CCCCCCAAACCCGAAAAGGTTGATCCTTTCGCGGAAAAAAACCTTGAGGG
AGGGAAGAACCCCTGGGTGATTTAAAAATTCCCAAAAGGATTCCCCCTCC
GGCACTTTTGGGGCCCCCCCCCCCCCGGGAAGGGTTTCCAAATTGTGGGC
CCCTCCGGGGGGGTGGGTGTTGTTCCCAAAATTTCTTCTTTCGGTTTTTT
TCCTGGGGTATTAGAGGGTTTCCCCTCCGCCCCCA