DY270863 | Citrus Genome Database

Overview


Name	DY270863
Unique Name	DY270863
Type	EST
Organism	Citrus clementina (Clementine)
Sequence length	1135

Libraries


Library Name	Type
Fruit-TF	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 4.347e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 142.51 bits (358), Expect = 4.347e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 128.257 bits (321), Expect = 8.484e-29
Identity = 66/73 (90.41%), Postives = 68/73 (93.15%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTI LEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LE+GRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 71.2478 bits (173), Expect = 1.231e-11
Identity = 34/36 (94.44%), Postives = 36/36 (100.00%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 1.398e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 137.502 bits (345), Expect = 1.398e-31
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 123.25 bits (308), Expect = 2.729e-27
Identity = 64/73 (87.67%), Postives = 66/73 (90.41%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTG TI LEVE SDTI NVKAKIQDKEGIPPDQQRLIFA K LE+GRTL+DYNIQKESTL LVLRL
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRL 73

HSP 4 Score: 68.5514 bits (166), Expect = 7.978e-11
Identity = 33/36 (91.67%), Postives = 35/36 (97.22%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:   41 QRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 7.182e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 125.176 bits (313), Expect = 7.182e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 115.161 bits (287), Expect = 7.432e-25
Identity = 57/73 (78.08%), Postives = 63/73 (86.30%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIFVKTLTGKTIT+E E  DT+G VK KI DKEG+P DQQRLI+AGK LED +TLADYNIQKESTL +VLRL
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRL 73

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 4.655e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 122.479 bits (306), Expect = 4.655e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 110.538 bits (275), Expect = 1.831e-23
Identity = 53/73 (72.60%), Postives = 63/73 (86.30%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGK LED +T+ADYNIQKESTL +VLRL
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRL 73

HSP 4 Score: 68.9366 bits (167), Expect = 6.108e-11
Identity = 32/36 (88.89%), Postives = 35/36 (97.22%), Query Frame = 1

Query:    1 QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 108
            QRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:   41 QRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.769e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1

Query:  142 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 330
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 120.553 bits (301), Expect = 1.769e-26
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 1

Query:  370 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 558
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 3 Score: 110.923 bits (276), Expect = 1.402e-23
Identity = 57/62 (91.94%), Postives = 58/62 (93.55%), Query Frame = 1

Query:  598 TITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            TITLEVE SDTI NVKAKIQDKEGIPPDQQRLIFAGK LEDGRTL+DYNIQKESTL LVLRL
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 62

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 4.220e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  115 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 99.3673 bits (246), Expect = 4.220e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  343 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 83.9593 bits (206), Expect = 1.835e-15
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 1

Query:  571 IFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            I VKTLTGK I +++E +DTI  VK ++++KEGIPP QQRLI+AGK L D +T  DYNI+  S L LVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  115 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  343 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 2.396e-15
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1

Query:  571 IFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            I VKTLTGK I +++E +DTI  +K ++++KEGIPP QQRLI+AGK L D +T  DYNI+  S L LVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  115 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  343 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 2.396e-15
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1

Query:  571 IFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            I VKTLTGK I +++E +DTI  +K ++++KEGIPP QQRLI+AGK L D +T  DYNI+  S L LVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  115 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 336
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 1

Query:  343 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 564
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 83.5741 bits (205), Expect = 2.396e-15
Identity = 41/71 (57.75%), Postives = 53/71 (74.65%), Query Frame = 1

Query:  571 IFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            I VKTLTGK I +++E +DTI  +K ++++KEGIPP QQRLI+AGK L D +T  DYNI+  S L LVL L
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLAL 73

[Close]

BLAST of DY270863 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1

Query:  109 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 345
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 98.9821 bits (245), Expect = 5.512e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 1

Query:  337 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 573
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 3 Score: 83.1889 bits (204), Expect = 3.130e-15
Identity = 39/73 (53.42%), Postives = 53/73 (72.60%), Query Frame = 1

Query:  565 MQIFVKTLTGKTITLEVESSDTIGNVKAKIQDKEGIPPDQQRLIFAGKPLEDGRTLADYNIQKESTLPLVLRL 783
            M I VKTLTGK I +++E +D +  +K ++++KEGIPP QQRLIF+GK + D +T ADY +Q  S L LVL L
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLAL 73

The following BLAST results are available for this feature:

BLAST of DY270863 vs. ExPASy Swiss-Prot

BLAST of DY270863 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	4.347e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	1.398e-31	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	7.182e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	4.655e-27	76.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	1.769e-26	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	4.220e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	5.512e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	5.512e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	5.512e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	5.512e-20	58.23	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	KN0AAP7YP18FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>DY270863 ID=DY270863; Name=DY270863; organism=Citrus clementina; type=EST; length=1135bp
CAGAGGCTTATCTTTGCCGGTAAACAGCTCGAGGATGGTCGCACACTTGC
TGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGTCTCC
GTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTATCACC
CTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAATTCA
GGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCCGGTA
AACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGAAGGAA
TCAACCCTTCATTTGGTCCTCCGTCTCAGGGGTGGCATGCAGATTTTTGT
GAAAACCCTGACTGGTAAGACTATAACTTTGGAGGTTGAAAGCTCTGACA
CGATCGACAATGTCAAGGCCAAGATACAGGACAAGGAGGGCATCCCACCT
GATCAACAGAGGTTAATCTTTGCCGGCAAACAACTTGAAGATGGTCGTAC
TCTTGCTGACTACAACATCCAGAAGGAGTCAACCCTCCATTTGGTGCTTC
GTCTCCGTGGTGGCATGCAGATCTTTGTGAAAACCCTCACCGGAAAAACA
ATTACTCTTGAGGTTGAAAGTTCTGACACCATCGGCAACGTGAAAGCAAA
AATTCAGGACAAGGAGGGTATCCCACCAGATCAGCAGAGGCTCATTTTTG
CTGGAAAGCCGCTTGAAGATGGAAGGACTCTTGCAGACTATAACATCCAG
AAAGAATCCACTCTTCCCTTGGTTCTTCGCCTCCTGGTGGTATGCAAATT
TTGTGAAGACCCTCCCGGGGAAAACCCTCCCATTGGAGGTTAAAAGTTCG
GAACCCATTGAACAAGTGAAGGGCAAAAATCCCGAAAAAGGAGGGGAATT
CCCCCCAAACCCGAAAAGGTTGATCCTTTCGCGGAAAAAAACCTTGAGGG
AGGGAAGAACCCCTGGGTGATTTAAAAATTCCCAAAAGGATTCCCCCTCC
GGCACTTTTGGGGCCCCCCCCCCCCCGGGAAGGGTTTCCAAATTGTGGGC
CCCTCCGGGGGGGTGGGTGTTGTTCCCAAAATTTCTTCTTTCGGTTTTTT
TCCTGGGGTATTAGAGGGTTTCCCCTCCGCCCCCA