DY270866

Overview
NameDY270866
Unique NameDY270866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1093
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_METMJ (Putative thiazole biosynthetic enzyme OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=Memar_2251 PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 4.406e-13
Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVVIK 566
            + E  +SR +       +I + + D    G G +GL+CA  L +   ++ A+IE+ +S GGG W GG +F  +VV++ A   LD  GI Y   ++ Y V K
Sbjct:    3 LNEVTISRAILEEQHRALIDHLEMDAAVIGGGPSGLACAALLGEK-GVKCALIEKKLSIGGGMWGGGMMFPRIVVQEDARRLLDRFGIAYKAFEEGYYVAK 102          

HSP 2 Score: 35.8094 bits (81), Expect = 4.406e-13
Identity = 15/32 (46.88%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  622 VKLFNAVAAEDLIVQG-GRVGGVVTNWALVSM 714
            V+ FN    ED++++G GR+GG+V NW  V M
Sbjct:  119 VEFFNLTTVEDVMIRGDGRIGGLVVNWTPVDM 150          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 58.151 bits (139), Expect = 1.625e-12
Identity = 30/94 (31.91%), Postives = 52/94 (55.32%), Query Frame = 3
Query:  258 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYD 539
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WLGG   + + +R PA   LDEL + Y+
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYE 95          

HSP 2 Score: 36.1946 bits (82), Expect = 1.625e-12
Identity = 19/54 (35.19%), Postives = 29/54 (53.70%), Query Frame = 1
Query:  592 IMSKLLARP---NVKLFNAVAAEDLIVQGGRVGGVVTNWALVSMNHETQSCLDP 744
            + +KL AR      ++ N    +D+IV+  RV GVV NW+ V       +C+DP
Sbjct:  109 LAAKLAARALEAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDP 162          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 2.100e-12
Identity = 31/94 (32.98%), Postives = 56/94 (59.57%), Query Frame = 3
Query:  255 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY 536
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WLGG L + + VR PA   L++L +D+
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDF 98          

HSP 2 Score: 30.4166 bits (67), Expect = 2.100e-12
Identity = 15/45 (33.33%), Postives = 24/45 (53.33%), Query Frame = 1
Query:  625 KLFNAVAAEDLIV-QGGRVGGVVTNWALVSMNHETQSCLDPNVME 756
            K+ N     D+++ +  RVGG+V NW  V       +C+DP  +E
Sbjct:  129 KMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVE 173          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.628e-12
Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDN 551
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E ++
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYES 96          

HSP 2 Score: 29.261 bits (64), Expect = 4.628e-12
Identity = 16/47 (34.04%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  625 KLFNAVAAEDLIV-QGGRVGGVVTNWALVSMNHETQSCLDPNVMETK 762
            ++FN V+ ED+++ +  RV G+V NW  V+     +  +DP ++ TK
Sbjct:  120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTK 163          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 1.013e-11
Identity = 34/94 (36.17%), Postives = 50/94 (53.19%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQD 548
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E +
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYE 95          

HSP 2 Score: 29.261 bits (64), Expect = 1.013e-11
Identity = 16/47 (34.04%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  625 KLFNAVAAEDLIV-QGGRVGGVVTNWALVSMNHETQSCLDPNVMETK 762
            ++FN V+ ED+++ +  RV G+V NW  V+     +  +DP ++ TK
Sbjct:  120 EVFNLVSFEDIMIRENDRVTGIVINWGPVTTQ---RLHVDPLMIRTK 163          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.315e-11
Identity = 36/99 (36.36%), Postives = 52/99 (52.53%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDE-QDNYVV 560
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W GG +F  +VV++ A   LD+ GI Y E Q  Y V
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYV 100          

HSP 2 Score: 30.0314 bits (66), Expect = 1.315e-11
Identity = 16/47 (34.04%), Postives = 30/47 (63.83%), Query Frame = 1
Query:  625 KLFNAVAAEDLIV-QGGRVGGVVTNWALVSMNHETQSCLDPNVMETK 762
            ++FN V+ ED+++ +  RV G+V NW  V++    +  +DP ++ TK
Sbjct:  120 EVFNLVSFEDVMIRENDRVTGIVVNWGPVTVQ---RLHVDPLMIRTK 163          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.212e-11
Identity = 30/99 (30.30%), Postives = 53/99 (53.54%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDYDEQDNYVVI 563
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W GG +F+ +V+      +L E  I Y ++D ++V+
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVV 100          

HSP 2 Score: 30.8018 bits (68), Expect = 2.212e-11
Identity = 12/24 (50.00%), Postives = 16/24 (66.67%), Query Frame = 1
Query:  628 LFNAVAAEDLIVQGGRVGGVVTNW 699
            +FN V  EDL++   R+ GVV NW
Sbjct:  120 IFNNVFVEDLVMYNERISGVVINW 143          
BLAST of DY270866 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 54.6842 bits (130), Expect = 2.218e-11
Identity = 30/90 (33.33%), Postives = 49/90 (54.44%), Query Frame = 3
Query:  267 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLGGQLFSAMVVRKPAHIFLDELGIDY 536
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +S GGG W G  LF+ +VV+K A   LD + I Y
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGY 91          

HSP 2 Score: 35.8094 bits (81), Expect = 2.218e-11
Identity = 17/43 (39.53%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  586 STIMSKLLARPNVKLFNAVAAEDLIVQGGRVGGVVTNWALVSM 714
            ST+ S+  A+  V +FN V  ED++++  R+ G+V NW+ V M
Sbjct:  108 STLTSQA-AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM 149          
The following BLAST results are available for this feature:
BLAST of DY270866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
THI4_METMJ4.406e-1333.66Putative thiazole biosynthetic enzyme OS=Methanocu... [more]
THI4_AERPE1.625e-1231.91Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_NATPD2.100e-1232.98Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METAC4.628e-1234.74Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METMA1.013e-1136.17Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBF1.315e-1136.36Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_FERNB2.212e-1130.30Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_DESOH2.218e-1133.33Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP7YP22FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270866 ID=DY270866; Name=DY270866; organism=Citrus clementina; type=EST; length=1093bp
CAAATTACTTCTCTTTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTT
AAAAAAAAAAAAAACATGGCAGCCATGACTTCTACAGCTTTCGCTCCTTC
AGTTTCGTCCACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTC
CCATGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCC
AACAACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACAC
TTTCAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACAC
GCAGGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTG
GTTGGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAA
CCCCAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTG
GCGCGTGGCTCGGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCA
GCCCACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAA
CTATGTTGTGATCAAGCATGCAGCGCTGTTTCACCTCCACTATAATGAGC
AAGCTCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGA
GGACTTGATAGTCCAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGG
CGTTGGTGTCAATGAATCACGAAACACAGTCTTGCCTGGATCCCAATGTA
ATGGAAACCAAAGGTGGTTGTGAACTCTTGTGGCCATGAAGGGCCCTTTT
GGTGCCCCCTGGATTAAAGAGGTTTAAAGAAATACCCAAAAGAATGAAGG
AATTGCCCGGGAATGAAGGGCCTGGAACATGAACCCTGCCCAAAAAACCT
ATTGGTAAGCCTAAACCGGGGAGGTTTGGCCCGGGATAAAAAATTTCCCG
GCCGGGAAAAATTGCCCAAAAATATAAGGTCCTCTCCAAAAAGGGGGGCC
CAAATTTGGAAACAAAGAAAAAAATCCCGGGCCAAAAAGGCCCCCCCCTT
TTGCGCCTTTAAATTTTCCCTGCGGCCCCCCCCAAAATCCCTT
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