DY270887
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_CYAP4 (Protoheme IX farnesyltransferase OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=ctaB PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 4.337e-26 Identity = 68/184 (36.96%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 Y++L+K RL +L + T+ G + + +D T M A SAN++N L++ D M+RT RPLPSGR+ A+ +A ++ V +L AN+L+A L + + +Y VYT LK+ N +G GAIPPL+GW A G +S +L A ++ W PHF LA L + DYA Sbjct: 23 YYQLTKPRLIVLFLITTAAGMWVAARGEVDPVLALITLLTGAMAAGSANTINCLYDRDIDYIMERTRHRPLPSGRVQPWEALVFAIALAVGAFSLQTLCANLLSACLEMAGIAVYVGVYTHWLKRSSTQNIVIGGAAGAIPPLVGWAAVTGELSWAAWVLFAIIFIWTPPHFWPLAMLIQEDYA 206
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_SYNS3 (Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain CC9311) GN=ctaB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.664e-26 Identity = 78/183 (42.62%), Postives = 97/183 (53.01%), Query Frame = 1 Query: 343 ELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 E++K RL L++AT+ G AL G + L T G + AA+A LN L+E D +M RT R LPSGR+S A A S +A ALL N L AGL+ L Y +YT LK N VG + GAIPPL+G AA GH+ L G L A + W HF ALA L +DY A Sbjct: 24 EVAKPRLIPLLLATTLGGMALTEGWPLSSPRLVCTLGGGALAAAAAGVLNCLWEQELDGRMLRTSGRALPSGRLSPSAAFVGAVSCTLAAAALLVSGVNCLAAGLSLLGLCSYVLLYTALLKPRTTQNIVVGGVAGAIPPLVGAAAATGHIGLGGWWLFALVMVWTPAHFWALALLLHDDYRA 206
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_ACAM1 (Protoheme IX farnesyltransferase OS=Acaryochloris marina (strain MBIC 11017) GN=ctaB PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 5.664e-26 Identity = 67/184 (36.41%), Postives = 101/184 (54.89%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 +++L+K RL +L + T+ + S + T A SAN++N +++ D M+RT RPLPSGRI V A +A+S+ + LLA+ AN+L+A LA + + +Y VYT LK+ N +G GAIPPL+GW A G +S +L A ++ W PHF LA + DY+ Sbjct: 23 FYQLTKPRLILLFLITTAAAMWVASSGQVGPRLFLTTLLAGACAAGSANTINCIYDRDIDYIMERTRHRPLPSGRIQVWQASVFAASLALTAFFLLAFGANLLSACLAMAGIAVYIGVYTYWLKRSSTQNIVIGGAAGAIPPLVGWAAVTGELSWAAWVLFAIIFIWTPPHFWPLAMMIEEDYS 206
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_ACICJ (Protoheme IX farnesyltransferase OS=Acidiphilium cryptum (strain JF-5) GN=ctaB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 9.661e-26 Identity = 66/180 (36.67%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 346 LSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDY 882 L K R+ LVV T G + G + G M A +A ++N ++ DA M+RT RP+P+GRIS A+ + ++ L+ N+L AGL A+++ Y F+YT LK+ P N +G GA PP++GW AA GHV L ++L A ++FW PHF AL+ DY Sbjct: 34 LLKPRVLYLVVYTGAAGLLVAPGGINPILGFT-AILCIAMAAGAAGAINMWYDRDIDAVMRRTAGRPIPTGRISPDGALAYGVALSALSVLLMWLATNLLAAGLLAASIGFYVFIYTMWLKRRTPQNIVIGGAAGAFPPVIGWAAATGHVGLLPVLLFAIIFFWTPPHFWALSLFASADY 212
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE_VIBVY (Protoheme IX farnesyltransferase OS=Vibrio vulnificus (strain YJ016) GN=cyoE PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.262e-25 Identity = 71/193 (36.79%), Postives = 100/193 (51.81%), Query Frame = 1 Query: 310 SLIRHYGRCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYT-PLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 S +R YW L+K ++ L++ TS G +L G ++A SA + N L + DAKM RT RRPLP G +S + + +A +G G L N LTA L ++L+ YA VYT LK+ P N + I GA+PPLLGWT+ G + + +L ++ W PHF ALA + DYA Sbjct: 10 SQLRSPWSTYWTLTKPKVVALMLLTSVVGMSLAPHEHFTWHQALIALVGIALMAGSAAAFNHLIDRRIDAKMARTYRRPLPKGDVSPFNVLLFALLIGSLGFLSLMLWVNSLTAYLTFASLLGYAVVYTLYLKRATPQNIVIAGIAGAMPPLLGWTSITGELHPHAWLLVMIIFIWTPPHFWALAIHRKEDYA 202
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE_VIBVU (Protoheme IX farnesyltransferase OS=Vibrio vulnificus GN=cyoE PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.262e-25 Identity = 71/193 (36.79%), Postives = 100/193 (51.81%), Query Frame = 1 Query: 310 SLIRHYGRCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 S +R YW L+K ++ L++ TS G +L G ++A SA + N L + DAKM RT RRPLP G +S + + +A +G G L N LTA L ++L+ YA VYT LK+ P N + I GA+PPLLGWT+ G + + +L ++ W PHF ALA + DYA Sbjct: 10 SQLRSPWSTYWTLTKPKVVALMLLTSVVGMSLAPHEHFTWHQALIALVGIALMAGSAAAFNHLIDRRIDAKMARTYRRPLPKGDVSPFNVLLFALLIGSLGFLSLMLWVNSLTAYLTFASLLGYAAVYTLYLKRATPQNIVIAGIAGAMPPLLGWTSITGELHPHAWVLVMIIFIWTPPHFWALAIHRKEDYA 202
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE_PSYIN (Protoheme IX farnesyltransferase OS=Psychromonas ingrahamii (strain 37) GN=cyoE PE=3 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 1.262e-25 Identity = 73/192 (38.02%), Postives = 106/192 (55.21%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFAL----GSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAARRI 897 Y EL K ++ L+V T+ G AL G G + L L G ++++SA +N + + DAKM RT RPL +S R A+ +++ +G G +LL + AN LTA + L+ YAFVYT LK+ P N +G + GA+PPLLGW + G ++ IL ++ W PHF ALA + DYA +I Sbjct: 32 YLELCKIKVVALLVLTALVGLALAPDMGRGYFVQLLSLF----GIGLLSSSAAVINHIVDSKIDAKMVRTKNRPLVRKAVSRRQALIFSAVIGTLGFSLLVFAANWLTAQMTLFALVGYAFVYTMFLKRATPQNIVIGGLAGAMPPLLGWISETGQLAAQPWILVMIIFTWTPPHFWALAIHRKADYAKAKI 219
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: COXX_SYNSC (Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain CC9605) GN=ctaB PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.648e-25 Identity = 76/183 (41.53%), Postives = 96/183 (52.46%), Query Frame = 1 Query: 343 ELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYAA 888 E++K RL L++AT+ G AL G + L T G + +A+A LN L+E D +M RT R LPSGR+S A A + +A LL N L AGL+ L Y +YT LK N +G + GAIPPL+G AA GHV L G L A + W HF ALA L R DY A Sbjct: 29 EVAKPRLIPLLLATTLGGMALSEGWPLSSPRLVCTLGGGALASAAAGVLNCLWEQDLDGRMARTSGRALPSGRLSPTSAFIGAIACTLAAAMLLVSGVNCLAAGLSLLGLCSYVLLYTALLKPRTSQNIVIGGVAGAIPPLVGAAAATGHVGLGGWWLFALVMVWTPAHFWALALLLREDYRA 211
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE_PSEMY (Protoheme IX farnesyltransferase OS=Pseudomonas mendocina (strain ymp) GN=cyoE PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.152e-25 Identity = 67/186 (36.02%), Postives = 104/186 (55.91%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDYA 885 R Y EL+K R+ +L++ TS G L + + + L + G + A +A ++N + + D+ M RT +RP+ +GR+S A+ +A + AG LL N L A L ++L+ YA +YT LK+ P N +G + GA PPLLGW A GH+S ++L ++ W PHF ALA + +YA Sbjct: 15 RDYLELTKPRVVLLMLITSLVGMFLATRAGVPWTVLLFGNLGIGLCAGAAAAVNHVVDRRIDSIMARTHKRPVTAGRVSPAAAIAFALLLATAGMGLLLLFTNQLAAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWVAVTGHLSAEPLLLVLIIFAWTPPHFWALAIHRKAEYA 200
BLAST of DY270887 vs. ExPASy Swiss-Prot
Match: CYOE_LEGPA (Protoheme IX farnesyltransferase OS=Legionella pneumophila (strain Paris) GN=cyoE PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 2.152e-25 Identity = 70/185 (37.84%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPATLYFWQKPHFMALAYLCRNDY 882 R Y EL K R+ +L++ T G L + + L + +T G + A SA ++N L + D+ M RT +RP+ GR+SV+ A+ +A +G+ G +LL N LTA L LI YA VYT LK+ N +G + GA PPLLGWTA G + ++L ++ W PHF ALA +Y Sbjct: 14 RDYVELCKPRVVLLMLLTVIVGMYLAAPGWVSLRLIAFTLLGIGLCAGSAAAINHLVDRHIDSIMARTKKRPVAYGRVSVKQALWFAVIIGLMGLSLLILFVNQLTALLTFVTLIGYAGVYTGYLKRATSQNIVIGGLAGAAPPLLGWTAVTGQLDPQALLLVLIIFTWTPPHFWALAIYRYKEY 198 The following BLAST results are available for this feature:
BLAST of DY270887 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270887 ID=DY270887; Name=DY270887; organism=Citrus clementina; type=EST; length=1214bpback to top |