DY270893

Overview
NameDY270893
Unique NameDY270893
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 1.033e-86
Identity = 151/175 (86.29%), Postives = 163/175 (93.14%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV EIR AQ+A+GPATVLAIGTATP + V+Q+ YPDYYFRIT SEH TELKEKF+RMCDKSMIKKRYM+LTEEILKENP++C YMAPSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVDEIRQAQKAEGPATVLAIGTATPPNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPSVCEYMAPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPHVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.9574 bits (71), Expect = 1.033e-86
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  175 KDLAENNKGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS6_SOYBN (Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV=1)

HSP 1 Score: 313.538 bits (802), Expect = 1.033e-86
Identity = 151/175 (86.29%), Postives = 164/175 (93.71%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V+EIR AQRA+GPATV+AIGTATP + V+Q+ YPDYYFRIT S+HM ELKEKFKRMCDKSMIKKRYMYL EEILKENP++CAYM PSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVEEIRKAQRAEGPATVMAIGTATPPNCVDQSTYPDYYFRITNSDHMNELKEKFKRMCDKSMIKKRYMYLNEEILKENPSVCAYMEPSLDARQDMVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 29.6462 bits (65), Expect = 1.033e-86
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN GA V VVCS I+
Sbjct:  175 KDLAENNTGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS5_SORBI (Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=3 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.347e-86
Identity = 151/173 (87.28%), Postives = 161/173 (93.06%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA GPATVLAIGTATPA+ V+QADYPDYYFRITKSEHMTELKEKFKRMCDKS I+KRYM+LTEE L ENPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTK++GLRPSV R MMYQQ CFAGG VLR+AK
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAHKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAK 179

HSP 2 Score: 30.8018 bits (68), Expect = 1.347e-86
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  179 KDLAENNRGARVLVVCSEIT 198
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_GERHY (Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=2 SV=1)

HSP 1 Score: 310.842 bits (795), Expect = 1.347e-86
Identity = 149/172 (86.63%), Postives = 162/172 (94.19%), Query Frame = 2 
Query:   41 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            ++ IR+AQRA+GPAT+LAIGTATPA+ V QADYPDYYFRITKSEHM +LKEKFKRMCDKSMI+KRYM++TEE LK+NPNMCAYMAPSLD RQD+VVVEVPKLGKEAA KAIKEWG PKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQ CFAGG VLRLAK
Sbjct:    7 MKAIRDAQRAEGPATILAIGTATPANCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHITEEYLKQNPNMCAYMAPSLDVRQDLVVVEVPKLGKEAAMKAIKEWGHPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAK 178

HSP 2 Score: 31.9574 bits (71), Expect = 1.347e-86
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  178 KDLAENNKGARVLVVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 310.842 bits (795), Expect = 1.347e-86
Identity = 150/175 (85.71%), Postives = 163/175 (93.14%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+EIR AQRA+GPAT++AIGTATP++ V+Q+ YPDYYFRIT SEH TELKEKF+RMCDKSMIKKRYM+LTEEILKENPN+C YMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLR SVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEIRRAQRAEGPATIMAIGTATPSNCVDQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEEILKENPNICEYMAPSLDARQDIVVVEVPKLGKEAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.9574 bits (71), Expect = 1.347e-86
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  175 KDLAENNKGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS3_SORBI (Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.292e-86
Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA GPATVLAIGTATPA+ V+QADYPDYYFRITKSEHMT+LKEKFKRMCDKS I+KRYM+LTEE L ENPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTK++GLRPSV R MMYQQ CFAGG VLR+AK
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAK 179

HSP 2 Score: 30.8018 bits (68), Expect = 2.292e-86
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  179 KDLAENNRGARVLVVCSEIT 198
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS7_SORBI (Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=3 SV=1)

HSP 1 Score: 311.227 bits (796), Expect = 2.292e-86
Identity = 150/173 (86.71%), Postives = 161/173 (93.06%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA GPATVLAIGTATPA+ V+QADYPDYYFRITKSEHMT+LKEKFKRMCDKS I+KRYM+LTEE L ENPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTK++GLRPSV R MMYQQ CFAGG VLR+AK
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPANCVHQADYPDYYFRITKSEHMTDLKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAK 179

HSP 2 Score: 30.8018 bits (68), Expect = 2.292e-86
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  179 KDLAENNRGARVLVVCSEIT 198
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_CALCH (Chalcone synthase OS=Callistephus chinensis GN=CHS PE=2 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 2.989e-86
Identity = 149/172 (86.63%), Postives = 160/172 (93.02%), Query Frame = 2 
Query:   41 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            +  IR AQR  GPAT+LAIGTATP++ V QADYPDYYFRITKSEHM +LKEKFKRMCDKSMI+KRYM+LTEE LKENP++C YMAPSLDARQD+VVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQ CFAGG VLRLAK
Sbjct:    7 IAAIREAQRRQGPATILAIGTATPSNCVYQADYPDYYFRITKSEHMVDLKEKFKRMCDKSMIRKRYMHLTEEYLKENPSLCEYMAPSLDARQDVVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAK 178

HSP 2 Score: 31.9574 bits (71), Expect = 2.989e-86
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  178 KDLAENNKGARVLVVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS2_SECCE (Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 3.900e-86
Identity = 148/173 (85.55%), Postives = 163/173 (94.22%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA+GPATVLAIGTATPA+ V QADYPDYYF+ITKS+HM +LKEKFKRMCDKS I+KRYM+LTEEIL++NPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+SKITHL+FCTTSGVDMPGADYQLTK++GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    6 TVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAK 178

HSP 2 Score: 30.8018 bits (68), Expect = 3.900e-86
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  178 KDLAENNRGARVLVVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_SECCE (Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 3.900e-86
Identity = 148/173 (85.55%), Postives = 163/173 (94.22%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA+GPATVLAIGTATPA+ V QADYPDYYF+ITKS+HM +LKEKFKRMCDKS I+KRYM+LTEEIL++NPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+SKITHL+FCTTSGVDMPGADYQLTK++GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    6 TVEEVRKAQRAEGPATVLAIGTATPANCVYQADYPDYYFKITKSDHMADLKEKFKRMCDKSQIRKRYMHLTEEILQDNPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVKRLMMYQQGCFAGGTVLRLAK 178

HSP 2 Score: 30.8018 bits (68), Expect = 3.900e-86
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  178 KDLAENNRGARVLVVCSEIT 197
The following BLAST results are available for this feature:
BLAST of DY270893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHSB_PEA1.033e-8686.29Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHS6_SOYBN1.033e-8686.29Chalcone synthase 6 OS=Glycine max GN=CHS6 PE=3 SV... [more]
CHS5_SORBI1.347e-8687.28Chalcone synthase 5 OS=Sorghum bicolor GN=CHS5 PE=... [more]
CHS1_GERHY1.347e-8686.63Chalcone synthase 1 OS=Gerbera hybrida GN=CHS1 PE=... [more]
CHSJ_PETHY1.347e-8685.71Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS3_SORBI2.292e-8686.71Chalcone synthase 3 OS=Sorghum bicolor GN=CHS3 PE=... [more]
CHS7_SORBI2.292e-8686.71Chalcone synthase 7 OS=Sorghum bicolor GN=CHS7 PE=... [more]
CHSY_CALCH2.989e-8686.63Chalcone synthase OS=Callistephus chinensis GN=CHS... [more]
CHS2_SECCE3.900e-8685.55Chalcone synthase 2 OS=Secale cereale GN=CHS2 PE=2... [more]
CHS1_SECCE3.900e-8685.55Chalcone synthase 1 OS=Secale cereale GN=CHS1 PE=3... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270893 ID=DY270893; Name=DY270893; organism=Citrus clementina; type=EST; length=1247bp
CAAACATATTCATCTTTGGGTTCAACTTGAAATGGCAACCGTTCAAGAGA
TCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGT
ACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTA
CTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCA
AGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTAACG
GAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCCATC
ACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGA
AAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAG
ATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGC
CGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCT
TCATGATGTACCAACAAAGATGTTTCGCCGGTGGCATTGTTCTTCGCCTC
GCAAAAAGACGTGGCAGAGAACAACAAGGGCGCTCACGTTCATGTTGTCT
GTTCATAGATCTCTAGGTGACTCGTTCCCGCAGCGCTACGGATATCCTTC
CCTTATCCTCTCGCGCGCCCGAGCTCTTGCTCATTATCTACCCAAGAAAC
TGCATTGATCCGATGCTTTTTACTATAACCATGATTGATTCCATAATTAA
TTTTCTTCTTATCGCTTTTCGCCCTTCTATTAGTTTTTATTTCTTTCTTA
TTCTTTGTCTTTTTTCTTTCTTCATCTTATTTGTTTCTCTTTTAAGTATA
ATATACCAACATCATTATGTACTAATACCTATGGAGCATCTGTACATTTA
TGAGGTTTCGCTGATTACTACTTTTAACAATTATTTTCTTACTTATCATT
TTTTTTATTTGTTTTTGTCTTTTGCTCATGTTCTAAATTCTTTTTGCATG
TATCTAATTTTTTCAATCTTTCTTACTTCTTACTTTATCTGGCTTATCTA
ATCTGATTTTTACTATTGTATTATTGGTCACTGTCTCCACTGTACATATC
AGCTAAATACTGAAGCGCGATATGTACAGCATTTTGGTTTTCTATACGCG
TTGCAATACAAGATATTGTTGATCCAATTGTACTAAAACGGTGGTGTTTA
TGTTATGATATTTGTTCTCTGGTCAAAATAGATAGAATTACAGTATG
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