DY270893

Overview
NameDY270893
Unique NameDY270893
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_IPOBA (Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF1 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 4.264e-85
Identity = 146/175 (83.43%), Postives = 159/175 (90.86%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH++FCTTSG+DMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 4.264e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V +VCS I+
Sbjct:  175 KDLAENNKGARVLIVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 4.264e-85
Identity = 149/175 (85.14%), Postives = 162/175 (92.57%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M  V+EIRNAQRA GPATVLAIGT+TP++ V+Q+ YPDYYFRIT SEH TELKEKFKRMC+KSMIKKRYM+LTEEIL+ENPN+CAYMAPSLDARQ+IVVVEVPKLGKEAA KAIKEWGQ KSKITHL+FCTTSGVDMPGADYQLTKL+GLR SVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVNVEEIRNAQRAQGPATVLAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCEKSMIKKRYMHLTEEILQENPNICAYMAPSLDARQNIVVVEVPKLGKEAAQKAIKEWGQSKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.9574 bits (71), Expect = 4.264e-85
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  175 KDLAENNKGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS8_IPOBA (Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DIV PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 4.265e-85
Identity = 146/175 (83.43%), Postives = 159/175 (90.86%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH++FCTTSG+DMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGIDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 4.265e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V +VCS I+
Sbjct:  175 KDLAENNKGARVLIVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS2_MAIZE (Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 5.562e-85
Identity = 147/173 (84.97%), Postives = 160/173 (92.49%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA GPATVLAIGTATPA+ V QADYPDYYFRITKSEH+T+LKEKFKRMCDKSMI+KRYM+LTEE L ENP+MCAYMAPSLDARQD+VVVEVPKLGK AA KAIKEWGQPKS+ITHL+FCTTSGVDMPGADYQLTK +GLRPSV R MMYQQ CFAGG VLR+AK
Sbjct:    7 TVEEVRKAQRATGPATVLAIGTATPANCVYQADYPDYYFRITKSEHLTDLKEKFKRMCDKSMIRKRYMHLTEEFLAENPSMCAYMAPSLDARQDVVVVEVPKLGKAAAQKAIKEWGQPKSRITHLVFCTTSGVDMPGADYQLTKALGLRPSVNRLMMYQQGCFAGGTVLRVAK 179

HSP 2 Score: 30.8018 bits (68), Expect = 5.562e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  179 KDLAENNRGARVLVVCSEIT 198
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSJ (Chalcone synthase OS=Oryza sativa subsp. japonica GN=CHS PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 7.255e-85
Identity = 147/173 (84.97%), Postives = 161/173 (93.06%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA+GPATVLAIGTATPA+ V QADYPDYYFRITKSEHM ELKEKFKRMCDKS I+KRYM+LTEEIL+ENPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+S+ITHL+FCTTSGVDMPGADYQL K++GLRP+V R MMYQQ CFAGG VLR+AK
Sbjct:    6 TVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVNRLMMYQQGCFAGGTVLRVAK 178

HSP 2 Score: 29.261 bits (64), Expect = 7.255e-85
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V  VCS I+
Sbjct:  178 KDLAENNRGARVLAVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_ORYSI (Chalcone synthase OS=Oryza sativa subsp. indica GN=CHS PE=2 SV=1)

HSP 1 Score: 307.76 bits (787), Expect = 7.255e-85
Identity = 147/173 (84.97%), Postives = 161/173 (93.06%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            TV+E+R AQRA+GPATVLAIGTATPA+ V QADYPDYYFRITKSEHM ELKEKFKRMCDKS I+KRYM+LTEEIL+ENPNMCAYMAPSLDARQDIVVVEVPKLGK AA KAIKEWGQP+S+ITHL+FCTTSGVDMPGADYQL K++GLRP+V R MMYQQ CFAGG VLR+AK
Sbjct:    6 TVEEVRRAQRAEGPATVLAIGTATPANCVYQADYPDYYFRITKSEHMVELKEKFKRMCDKSQIRKRYMHLTEEILQENPNMCAYMAPSLDARQDIVVVEVPKLGKAAAQKAIKEWGQPRSRITHLVFCTTSGVDMPGADYQLAKMLGLRPNVSRLMMYQQGCFAGGTVLRVAK 178

HSP 2 Score: 29.261 bits (64), Expect = 7.255e-85
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V  VCS I+
Sbjct:  178 KDLAENNRGARVLAVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_CARAN (Chalcone synthase OS=Cardamine amara GN=CHS PE=3 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 7.255e-85
Identity = 148/173 (85.55%), Postives = 160/173 (92.49%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            ++ EIR AQRADGPA +LAIGTA PA+ V QA+YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KR+M++TEE LKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    8 SLDEIRKAQRADGPAGILAIGTANPANYVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHVTEEFLKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 180

HSP 2 Score: 30.8018 bits (68), Expect = 7.255e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  180 KDLAENNRGARVLVVCSEIT 199
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS7_IPOBA (Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-DIII PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 7.255e-85
Identity = 147/175 (84.00%), Postives = 159/175 (90.86%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R A+RA+GPAT+LAIGTATPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH+ FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAKRAEGPATILAIGTATPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVFFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.255e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V +VCS I+
Sbjct:  175 KDLAENNKGARVLIVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 7.255e-85
Identity = 146/175 (83.43%), Postives = 159/175 (90.86%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKE+F+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKERFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.255e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V +VCS I+
Sbjct:  175 KDLAENNKGARVLIVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 7.256e-85
Identity = 147/175 (84.00%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA PA+ V QA YPD+YF+IT SEH TELKEKF+RMCDKSMIK RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPANKVEQATYPDFYFKITNSEHKTELKEKFQRMCDKSMIKSRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.256e-85
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
The following BLAST results are available for this feature:
BLAST of DY270893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS1_IPOBA4.264e-8583.43Chalcone synthase LF1 OS=Ipomoea batatas GN=CHS-LF... [more]
CHSY_CATRO4.264e-8585.14Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHS8_IPOBA4.265e-8583.43Chalcone synthase DIV OS=Ipomoea batatas GN=CHS-DI... [more]
CHS2_MAIZE5.562e-8584.97Chalcone synthase C2 OS=Zea mays GN=C2 PE=3 SV=1[more]
CHSY_ORYSJ7.255e-8584.97Chalcone synthase OS=Oryza sativa subsp. japonica ... [more]
CHSY_ORYSI7.255e-8584.97Chalcone synthase OS=Oryza sativa subsp. indica GN... [more]
CHSY_CARAN7.255e-8585.55Chalcone synthase OS=Cardamine amara GN=CHS PE=3 S... [more]
CHS7_IPOBA7.255e-8584.00Chalcone synthase DIII OS=Ipomoea batatas GN=CHS-D... [more]
CHS4_IPOBA7.255e-8583.43Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS6_TRISU7.256e-8584.00Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270893 ID=DY270893; Name=DY270893; organism=Citrus clementina; type=EST; length=1247bp
CAAACATATTCATCTTTGGGTTCAACTTGAAATGGCAACCGTTCAAGAGA
TCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGT
ACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTA
CTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCA
AGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTAACG
GAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCCATC
ACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGA
AAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAG
ATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGC
CGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCT
TCATGATGTACCAACAAAGATGTTTCGCCGGTGGCATTGTTCTTCGCCTC
GCAAAAAGACGTGGCAGAGAACAACAAGGGCGCTCACGTTCATGTTGTCT
GTTCATAGATCTCTAGGTGACTCGTTCCCGCAGCGCTACGGATATCCTTC
CCTTATCCTCTCGCGCGCCCGAGCTCTTGCTCATTATCTACCCAAGAAAC
TGCATTGATCCGATGCTTTTTACTATAACCATGATTGATTCCATAATTAA
TTTTCTTCTTATCGCTTTTCGCCCTTCTATTAGTTTTTATTTCTTTCTTA
TTCTTTGTCTTTTTTCTTTCTTCATCTTATTTGTTTCTCTTTTAAGTATA
ATATACCAACATCATTATGTACTAATACCTATGGAGCATCTGTACATTTA
TGAGGTTTCGCTGATTACTACTTTTAACAATTATTTTCTTACTTATCATT
TTTTTTATTTGTTTTTGTCTTTTGCTCATGTTCTAAATTCTTTTTGCATG
TATCTAATTTTTTCAATCTTTCTTACTTCTTACTTTATCTGGCTTATCTA
ATCTGATTTTTACTATTGTATTATTGGTCACTGTCTCCACTGTACATATC
AGCTAAATACTGAAGCGCGATATGTACAGCATTTTGGTTTTCTATACGCG
TTGCAATACAAGATATTGTTGATCCAATTGTACTAAAACGGTGGTGTTTA
TGTTATGATATTTGTTCTCTGGTCAAAATAGATAGAATTACAGTATG
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