DY270893

Overview
NameDY270893
Unique NameDY270893
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 9.463e-85
Identity = 145/172 (84.30%), Postives = 161/172 (93.60%), Query Frame = 2 
Query:   41 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            V+ IR AQRA+GPAT+LAIGTATPA+ V QADYPDYYFR+T+SEHM +LKEKF+RMCDKSMI+KRYM++TEE LKENP+MC +MAPSLDARQD+VVVEVPKLGKEAATKAIKEWG PKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:   10 VETIRKAQRAEGPATILAIGTATPANCVYQADYPDYYFRVTESEHMVDLKEKFQRMCDKSMIRKRYMHITEEFLKENPSMCKFMAPSLDARQDLVVVEVPKLGKEAATKAIKEWGFPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 181

HSP 2 Score: 31.9574 bits (71), Expect = 9.463e-85
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  181 KDLAENNKGARVLVVCSEIT 200
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_PETCR (Chalcone synthase OS=Petroselinum crispum GN=CHS PE=3 SV=1)

HSP 1 Score: 306.99 bits (785), Expect = 9.463e-85
Identity = 147/174 (84.48%), Postives = 162/174 (93.10%), Query Frame = 2 
Query:   35 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            A ++EIRN QRA GPA +LAIGTATP++ V QADYPDYYFRIT SEHMT+LK KFKRMC+KSMI+KRYM++TEE LKENPN+CAY APSLDARQD+VVVEVP+LGKEAA+KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRPSVKRFMMYQQ CFAGG VLRLAK
Sbjct:    7 AEIEEIRNRQRAQGPANILAIGTATPSNCVYQADYPDYYFRITNSEHMTDLKLKFKRMCEKSMIRKRYMHITEEYLKENPNVCAYEAPSLDARQDLVVVEVPRLGKEAASKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAK 180

HSP 2 Score: 29.6462 bits (65), Expect = 9.463e-85
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN GA V VVCS I+
Sbjct:  180 KDLAENNAGARVLVVCSEIT 199
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_CHRAE (Chalcone synthase OS=Chrysosplenium americanum GN=CHS PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 9.464e-85
Identity = 147/174 (84.48%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:   35 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            A ++EIRNAQRA+GPAT+LAIGTATPA+ V QADYPD+YFRIT SEH TELKEKF+RMCDKSMIKKRYM+LTE++LKENP MC YMAPSLDARQD+VVVE+ KLGKEAA KAIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CF GG VLRLAK
Sbjct:    5 ALMEEIRNAQRAEGPATILAIGTATPANCVIQADYPDFYFRITNSEHKTELKEKFQRMCDKSMIKKRYMHLTEDLLKENPKMCEYMAPSLDARQDMVVVEIRKLGKEAAVKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFPGGTVLRLAK 178

HSP 2 Score: 30.8018 bits (68), Expect = 9.464e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  178 KDLAENNRGARVLVVCSEIT 197
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS3_SINAL (Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 9.464e-85
Identity = 147/174 (84.48%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:   35 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            +++ EIR AQRADGPA +LAIGTA PA+ V QA+YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KR+M+LTEE LK+NPNMCAYMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    7 SSLDEIRKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 180

HSP 2 Score: 30.8018 bits (68), Expect = 9.464e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  180 KDLAENNRGARVLVVCSEIT 199
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 9.464e-85
Identity = 147/174 (84.48%), Postives = 161/174 (92.53%), Query Frame = 2 
Query:   35 ATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            +++ EIR AQRADGPA +LAIGTA PA+ V QA+YPDYYFRIT SEHMT+LKEKFKRMCDKS I+KR+M+LTEE LK+NPNMCAYMAPSLDARQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    7 SSLDEIRKAQRADGPAGILAIGTANPANHVIQAEYPDYYFRITNSEHMTDLKEKFKRMCDKSTIRKRHMHLTEEFLKDNPNMCAYMAPSLDARQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 180

HSP 2 Score: 30.8018 bits (68), Expect = 9.464e-85
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  180 KDLAENNRGARVLVVCSEIT 199
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.235e-84
Identity = 144/175 (82.29%), Postives = 161/175 (92.00%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R AQRA+GPAT+LAIGTATP + V+Q+ YPD+YFR+T SEH  ELK KF+RMCD S IKKRYM+LTEEILKENPN+CAYMAPSLDARQD+VVVE+PKLGKEAAT+AIKEWGQPKSKITHL+FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTATPPNYVDQSTYPDFYFRVTNSEHKKELKAKFQRMCDNSQIKKRYMHLTEEILKENPNICAYMAPSLDARQDMVVVEIPKLGKEAATRAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.9574 bits (71), Expect = 1.235e-84
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  175 KDLAENNKGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS2_IPOBA (Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF2 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.610e-84
Identity = 146/175 (83.43%), Postives = 158/175 (90.29%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E+R AQRA+GPAT+LAIGT TPA+ VNQ+ YPDYYFRIT SEH TELKEKF+RMCDKSMI KRYM+LTEEILKENP+ C YMAPSLDARQDI VVEVPKLGKEAA  AIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GL PSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEVRKAQRAEGPATILAIGTVTPANCVNQSTYPDYYFRITNSEHKTELKEKFQRMCDKSMITKRYMHLTEEILKENPSFCEYMAPSLDARQDIAVVEVPKLGKEAAQSAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLSPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 1.610e-84
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V +VCS I+
Sbjct:  175 KDLAENNKGARVLIVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 1.610e-84
Identity = 146/175 (83.43%), Postives = 161/175 (92.00%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTATPA+ V Q+ YPD+YF+IT SEH T LKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTATPANCVEQSTYPDFYFKITNSEHKTVLKEKFQRMCDKSMIKRRYMYLTEEILKENPSLCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 1.610e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.101e-84
Identity = 145/172 (84.30%), Postives = 161/172 (93.60%), Query Frame = 2 
Query:   41 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            ++EIR AQRA+GPA VLAIGT+TP +++ QADYPDYYFRITKSEH+TELKEKFKRMCDKSMIKKRYMYLTEEILKENPN+CA+MAPSLDARQDIVV EVPKL KEAA +AIKEWG PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQ CFAGG VLRLAK
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAARAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAK 176

HSP 2 Score: 29.6462 bits (65), Expect = 2.101e-84
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN GA V VVCS I+
Sbjct:  176 KDLAENNAGARVLVVCSEIT 195
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 305.834 bits (782), Expect = 2.101e-84
Identity = 145/172 (84.30%), Postives = 161/172 (93.60%), Query Frame = 2 
Query:   41 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            ++EIR AQRA+GPA VLAIGT+TP +++ QADYPDYYFRITKSEH+TELKEKFKRMCDKSMIKKRYMYLTEEILKENPN+CA+MAPSLDARQDIVV EVPKL KEAA +AIKEWG PKS+ITHLIFCTTSG+DMPGADYQLT+L+GLRPSV RFM+YQQ CFAGG VLRLAK
Sbjct:    5 MEEIRQAQRAEGPAAVLAIGTSTPPNALYQADYPDYYFRITKSEHLTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNICAFMAPSLDARQDIVVTEVPKLAKEAAVRAIKEWGHPKSRITHLIFCTTSGIDMPGADYQLTRLLGLRPSVNRFMLYQQGCFAGGTVLRLAK 176

HSP 2 Score: 29.6462 bits (65), Expect = 2.101e-84
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN GA V VVCS I+
Sbjct:  176 KDLAENNAGARVLVVCSEIT 195
The following BLAST results are available for this feature:
BLAST of DY270893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHS3_GERHY9.463e-8584.30Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]
CHSY_PETCR9.463e-8584.48Chalcone synthase OS=Petroselinum crispum GN=CHS P... [more]
CHSY_CHRAE9.464e-8584.48Chalcone synthase OS=Chrysosplenium americanum GN=... [more]
CHS3_SINAL9.464e-8584.48Chalcone synthase 3 OS=Sinapis alba GN=CHS3 PE=2 S... [more]
CHS1_SINAL9.464e-8584.48Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHSY_HYDMC1.235e-8482.29Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHS2_IPOBA1.610e-8483.43Chalcone synthase LF2 OS=Ipomoea batatas GN=CHS-LF... [more]
CHS6_PEA1.610e-8483.43Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS8_BROFI2.101e-8484.30Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI2.101e-8484.30Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270893 ID=DY270893; Name=DY270893; organism=Citrus clementina; type=EST; length=1247bp
CAAACATATTCATCTTTGGGTTCAACTTGAAATGGCAACCGTTCAAGAGA
TCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGT
ACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTA
CTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCA
AGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTAACG
GAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCCATC
ACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGA
AAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAG
ATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGC
CGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCT
TCATGATGTACCAACAAAGATGTTTCGCCGGTGGCATTGTTCTTCGCCTC
GCAAAAAGACGTGGCAGAGAACAACAAGGGCGCTCACGTTCATGTTGTCT
GTTCATAGATCTCTAGGTGACTCGTTCCCGCAGCGCTACGGATATCCTTC
CCTTATCCTCTCGCGCGCCCGAGCTCTTGCTCATTATCTACCCAAGAAAC
TGCATTGATCCGATGCTTTTTACTATAACCATGATTGATTCCATAATTAA
TTTTCTTCTTATCGCTTTTCGCCCTTCTATTAGTTTTTATTTCTTTCTTA
TTCTTTGTCTTTTTTCTTTCTTCATCTTATTTGTTTCTCTTTTAAGTATA
ATATACCAACATCATTATGTACTAATACCTATGGAGCATCTGTACATTTA
TGAGGTTTCGCTGATTACTACTTTTAACAATTATTTTCTTACTTATCATT
TTTTTTATTTGTTTTTGTCTTTTGCTCATGTTCTAAATTCTTTTTGCATG
TATCTAATTTTTTCAATCTTTCTTACTTCTTACTTTATCTGGCTTATCTA
ATCTGATTTTTACTATTGTATTATTGGTCACTGTCTCCACTGTACATATC
AGCTAAATACTGAAGCGCGATATGTACAGCATTTTGGTTTTCTATACGCG
TTGCAATACAAGATATTGTTGATCCAATTGTACTAAAACGGTGGTGTTTA
TGTTATGATATTTGTTCTCTGGTCAAAATAGATAGAATTACAGTATG
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