DY270893

Overview
NameDY270893
Unique NameDY270893
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1247
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_PINSY (Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 SV=1)

HSP 1 Score: 303.523 bits (776), Expect = 4.662e-84
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M  ++  R AQRADGPAT+LAIGTATP ++V+Q+ YPDYYF+IT SEHMTELKEKF+RMCDKS IKKRYMYLTEEILKENP +C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITH+IFCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLR+AK
Sbjct:    6 MKDLEAFRKAQRADGPATILAIGTATPPNAVDQSSYPDYYFKITNSEHMTELKEKFRRMCDKSAIKKRYMYLTEEILKENPKVCEYMAPSLDARQDMVVVEVPRLGKEAAAKAIKEWGQPKSKITHVIFCTTSGVDMPGADYQLTKLLGLRPSVKRVMMYQQGCFAGGTVLRVAK 180

HSP 2 Score: 30.8018 bits (68), Expect = 4.662e-84
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  180 KDLAENNRGARVLVVCSEIT 199
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS5_PEA (Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 4.662e-84
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YFRIT SEH TELK+KF+RMCDKSMI +RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 4.662e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS3_PEA (Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 4.662e-84
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YFRIT SEH TELK+KF+RMCDKSMI +RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFRITNSEHKTELKQKFQRMCDKSMINRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 4.662e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS9_MEDSA (Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 7.933e-84
Identity = 144/175 (82.29%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT++AIGTA PA+ V Q+ YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPANCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.933e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS8_MEDSA (Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=2 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 7.933e-84
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRTAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.933e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS4_MEDSA (Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=2 SV=2)

HSP 1 Score: 301.982 bits (772), Expect = 7.933e-84
Identity = 145/175 (82.86%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA PA+ V Q+ YPD+YF+IT SEH TELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLI CTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRKAQRAEGPATILAIGTANPANCVEQSTYPDFYFKITNSEHKTELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIVCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 7.933e-84
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 301.597 bits (771), Expect = 7.933e-84
Identity = 145/175 (82.86%), Postives = 157/175 (89.71%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M TV+E R AQRA+GPAT+LAIGT+TP++ V+Q+ YPDYYFRIT SEH TELKEKFKRMCDKSMIKKRYM+LTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGK    KAIKEWGQPKSKITHL+FCTTSGVDMP  DYQL KL+ +RPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    1 MVTVEEYRKAQRAEGPATILAIGTSTPSNCVDQSTYPDYYFRITNSEHKTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKRGTQKAIKEWGQPKSKITHLVFCTTSGVDMPACDYQLAKLLPVRPSVKRLMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.9574 bits (71), Expect = 7.933e-84
Identity = 15/20 (75.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENNKGA V VVCS I+
Sbjct:  175 KDLAENNKGARVLVVCSEIT 194
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS3_MEDSA (Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 1.761e-83
Identity = 143/175 (81.71%), Postives = 160/175 (91.43%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT++AIGTA P++ V Q+ YPD+YF+IT SEH  ELKEKF+RMCDKSMIK+RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVSEIRQAQRAEGPATIMAIGTANPSNCVEQSTYPDFYFKITNSEHKVELKEKFQRMCDKSMIKRRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 1.761e-83
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 1.761e-83
Identity = 145/175 (82.86%), Postives = 158/175 (90.29%), Query Frame = 2 
Query:   32 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            M +V EIR AQRA+GPAT+LAIGTA P + V QA YPD+YF+IT SEH  ELKEKF+RMCDKSMIK RYMYLTEEILKENP++C YMAPSLDARQD+VVVEVP+LGKEAA KAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKL+GLRP VKR+MMYQQ CFAGG VLRLAK
Sbjct:    1 MVSVAEIRKAQRAEGPATILAIGTANPPNRVEQATYPDFYFKITNSEHKVELKEKFQRMCDKSMIKSRYMYLTEEILKENPSVCEYMAPSLDARQDMVVVEVPRLGKEAAVKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAK 175

HSP 2 Score: 31.5722 bits (70), Expect = 1.761e-83
Identity = 14/17 (82.35%), Postives = 15/17 (88.24%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS 605
            KD+AENNKGA V VVCS
Sbjct:  175 KDLAENNKGARVLVVCS 191
[Close]
BLAST of DY270893 vs. ExPASy Swiss-Prot
Match: CHSY_ARAAL (Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 2.296e-83
Identity = 144/173 (83.24%), Postives = 158/173 (91.33%), Query Frame = 2 
Query:   38 TVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLIGLRPSVKRFMMYQQRCFAGGIVLRLAK 556
            +++EIR AQRADGPA +L IGTA P + V QA+YPDYYFRIT S+HMT+LKEKFKRMCDKSMI+KR+M+LTEE LKENP MCAYMAPSLD RQDIVVVEVPKLGKEAA KAIKEWGQPKSKITH++FCTTSGVDMPGADYQLTKL+GLRPSVKR MMYQQ CFAGG VLRLAK
Sbjct:    4 SLEEIRKAQRADGPAGILGIGTANPPNHVLQAEYPDYYFRITNSDHMTDLKEKFKRMCDKSMIRKRHMHLTEEFLKENPKMCAYMAPSLDTRQDIVVVEVPKLGKEAAVKAIKEWGQPKSKITHVVFCTTSGVDMPGADYQLTKLLGLRPSVKRLMMYQQGCFAGGTVLRLAK 176

HSP 2 Score: 30.8018 bits (68), Expect = 2.296e-83
Identity = 14/20 (70.00%), Postives = 17/20 (85.00%), Query Frame = 3 
Query:  555 KDVAENNKGAHVHVVCS*IS 614
            KD+AENN+GA V VVCS I+
Sbjct:  176 KDLAENNRGARVLVVCSEIT 195
The following BLAST results are available for this feature:
BLAST of DY270893 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 144
Match NameE-valueIdentityDescription
CHSY_PINSY4.662e-8482.86Chalcone synthase OS=Pinus sylvestris GN=CHS PE=3 ... [more]
CHS5_PEA4.662e-8482.86Chalcone synthase 5 OS=Pisum sativum GN=CHS5 PE=3 ... [more]
CHS3_PEA4.662e-8482.86Chalcone synthase 3 OS=Pisum sativum GN=CHS3 PE=3 ... [more]
CHS9_MEDSA7.933e-8482.29Chalcone synthase 9 OS=Medicago sativa GN=CHS9 PE=... [more]
CHS8_MEDSA7.933e-8482.86Chalcone synthase 8 OS=Medicago sativa GN=CHS8 PE=... [more]
CHS4_MEDSA7.933e-8482.86Chalcone synthase 4 OS=Medicago sativa GN=CHS4 PE=... [more]
CHS1_SOLLC7.933e-8482.86Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHS3_MEDSA1.761e-8381.71Chalcone synthase 4-1 OS=Medicago sativa GN=CHS4-1... [more]
CHS1_TRISU1.761e-8382.86Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHSY_ARAAL2.296e-8383.24Chalcone synthase OS=Arabis alpina GN=CHS PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB20FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270893 ID=DY270893; Name=DY270893; organism=Citrus clementina; type=EST; length=1247bp
CAAACATATTCATCTTTGGGTTCAACTTGAAATGGCAACCGTTCAAGAGA
TCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCCATCGGT
ACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGACTATTA
CTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGAAGTTCA
AGCGCATGTGTGACAAGTCGATGATTAAGAAGCGTTACATGTACTTAACG
GAAGAGATTTTGAAGGAAAACCCCAACATGTGCGCTTACATGGCTCCATC
ACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGCTCGGGA
AAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAGTCTAAG
ATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCCCGGCGC
CGACTACCAGCTCACCAAACTGATCGGCCTGCGCCCCTCCGTCAAGCGCT
TCATGATGTACCAACAAAGATGTTTCGCCGGTGGCATTGTTCTTCGCCTC
GCAAAAAGACGTGGCAGAGAACAACAAGGGCGCTCACGTTCATGTTGTCT
GTTCATAGATCTCTAGGTGACTCGTTCCCGCAGCGCTACGGATATCCTTC
CCTTATCCTCTCGCGCGCCCGAGCTCTTGCTCATTATCTACCCAAGAAAC
TGCATTGATCCGATGCTTTTTACTATAACCATGATTGATTCCATAATTAA
TTTTCTTCTTATCGCTTTTCGCCCTTCTATTAGTTTTTATTTCTTTCTTA
TTCTTTGTCTTTTTTCTTTCTTCATCTTATTTGTTTCTCTTTTAAGTATA
ATATACCAACATCATTATGTACTAATACCTATGGAGCATCTGTACATTTA
TGAGGTTTCGCTGATTACTACTTTTAACAATTATTTTCTTACTTATCATT
TTTTTTATTTGTTTTTGTCTTTTGCTCATGTTCTAAATTCTTTTTGCATG
TATCTAATTTTTTCAATCTTTCTTACTTCTTACTTTATCTGGCTTATCTA
ATCTGATTTTTACTATTGTATTATTGGTCACTGTCTCCACTGTACATATC
AGCTAAATACTGAAGCGCGATATGTACAGCATTTTGGTTTTCTATACGCG
TTGCAATACAAGATATTGTTGATCCAATTGTACTAAAACGGTGGTGTTTA
TGTTATGATATTTGTTCTCTGGTCAAAATAGATAGAATTACAGTATG
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