DY270933

Overview
NameDY270933
Unique NameDY270933
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1103
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL2_BOVIN (ADP-ribosylation factor-like protein 2 OS=Bos taurus GN=ARL2 PE=2 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 1.302e-42
Identity = 81/166 (48.80%), Postives = 117/166 (70.48%), Query Frame = 2
Query:  128 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            ++E+R+LM+GLD AGKTTIL K    +I T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQNLLVEERLAGATLLIFANKQDLPGALSSNAIREALELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL2_HUMAN (ADP-ribosylation factor-like protein 2 OS=Homo sapiens GN=ARL2 PE=1 SV=4)

HSP 1 Score: 173.326 bits (438), Expect = 2.220e-42
Identity = 81/166 (48.80%), Postives = 117/166 (70.48%), Query Frame = 2
Query:  128 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            ++E+R+LM+GLD AGKTTIL K    +I T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A+++  I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDIDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSSNAIREVLELDSIRSHHWCIQGCSAVTGENLLPGIDWLLDDISSR 179          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL2_MOUSE (ADP-ribosylation factor-like protein 2 OS=Mus musculus GN=Arl2 PE=1 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 3.787e-42
Identity = 80/166 (48.19%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  128 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            ++E+R+LM+GLD AGKTTIL K    ++ T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   14 ERELRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL2_RAT (ADP-ribosylation factor-like protein 2 OS=Rattus norvegicus GN=Arl2 PE=2 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 1.102e-41
Identity = 79/166 (47.59%), Postives = 116/166 (69.88%), Query Frame = 2
Query:  128 KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            ++++R+LM+GLD AGKTTIL K    ++ T  PT+GFN++T+E++     +WDVGGQ  +R  WR+YF++T GLI+VVDS DR R+ + + EL  +L E+ L  A LL+FANKQDLP A++   I + L L S+R  HW IQ   A +GE L  G+DWL ++I+++
Sbjct:   14 ERDVRLLMLGLDNAGKTTILKKFNGEDVDTISPTLGFNIKTLEHRGFKLNIWDVGGQKSLRSYWRNYFESTDGLIWVVDSADRQRMQDCQRELQSLLVEERLAGATLLIFANKQDLPGALSCNAIQEALELDSIRSHHWRIQGCSAVTGEDLLPGIDWLLDDISSR 179          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_TAEGU (ADP-ribosylation factor-like protein 3 OS=Taeniopygia guttata GN=ARL3 PE=2 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.455e-41
Identity = 81/165 (49.09%), Postives = 115/165 (69.70%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL  +L+E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A SGEG+ +G++W+  N++ K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALSGEGVQDGMNWVCKNVSTK 180          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_BOVIN (ADP-ribosylation factor-like protein 3 OS=Bos taurus GN=ARL3 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 1.218e-40
Identity = 80/165 (48.48%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL  +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N++ K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRFWQIQSCSALTGEGVQDGMNWVCKNVSAK 180          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_RAT (ADP-ribosylation factor-like protein 3 OS=Rattus norvegicus GN=Arl3 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 2.714e-40
Identity = 82/165 (49.70%), Postives = 112/165 (67.88%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR YF+NT  LI+V+DS DR R  E   EL  +L E++L    +LVFANKQDL  A  AAEI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLVFANKQDLLTAAPAAEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_XENLA (ADP-ribosylation factor-like protein 3 OS=Xenopus laevis GN=arl3 PE=2 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 3.545e-40
Identity = 79/165 (47.88%), Postives = 114/165 (69.09%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL  +L+E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +G+G+ +G++W+  N+  K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDVLIYVIDSADRKRFEETGQELAELLDEEKLSGVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGQGVQDGMNWVCKNVNAK 180          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_PIG (ADP-ribosylation factor-like protein 3 OS=Sus scrofa GN=ARL3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 4.630e-40
Identity = 80/165 (48.48%), Postives = 113/165 (68.48%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR+YF+NT  LI+V+DS DR R  E   EL  +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRNYFENTDILIYVIDSADRKRFEETGQELAELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180          
BLAST of DY270933 vs. ExPASy Swiss-Prot
Match: ARL3_MOUSE (ADP-ribosylation factor-like protein 3 OS=Mus musculus GN=Arl3 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 7.897e-40
Identity = 80/165 (48.48%), Postives = 112/165 (67.88%), Query Frame = 2
Query:  131 KEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRIVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 625
            +E+RIL++GLD AGKTT+L +L   +I    PT GFN+++V+ +     VWD+GGQ KIRP WR YF+NT  LI+V+DS DR R  E   EL  +L E++L    +L+FANKQDL  A  A+EI + L LH++R R W IQS  A +GEG+ +G++W+  N+  K
Sbjct:   16 QEVRILLLGLDNAGKTTLLKQLASEDISHITPTQGFNIKSVQSQGFKLNVWDIGGQRKIRPYWRSYFENTDILIYVIDSADRKRFEETGQELTELLEEEKLSCVPVLIFANKQDLLTAAPASEIAEGLNLHTIRDRVWQIQSCSALTGEGVQDGMNWVCKNVNAK 180          
The following BLAST results are available for this feature:
BLAST of DY270933 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 217
Match NameE-valueIdentityDescription
ARL2_BOVIN1.302e-4248.80ADP-ribosylation factor-like protein 2 OS=Bos taur... [more]
ARL2_HUMAN2.220e-4248.80ADP-ribosylation factor-like protein 2 OS=Homo sap... [more]
ARL2_MOUSE3.787e-4248.19ADP-ribosylation factor-like protein 2 OS=Mus musc... [more]
ARL2_RAT1.102e-4147.59ADP-ribosylation factor-like protein 2 OS=Rattus n... [more]
ARL3_TAEGU2.455e-4149.09ADP-ribosylation factor-like protein 3 OS=Taeniopy... [more]
ARL3_BOVIN1.218e-4048.48ADP-ribosylation factor-like protein 3 OS=Bos taur... [more]
ARL3_RAT2.714e-4049.70ADP-ribosylation factor-like protein 3 OS=Rattus n... [more]
ARL3_XENLA3.545e-4047.88ADP-ribosylation factor-like protein 3 OS=Xenopus ... [more]
ARL3_PIG4.630e-4048.48ADP-ribosylation factor-like protein 3 OS=Sus scro... [more]
ARL3_MOUSE7.897e-4048.48ADP-ribosylation factor-like protein 3 OS=Mus musc... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YE21FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270933 ID=DY270933; Name=DY270933; organism=Citrus clementina; type=EST; length=1103bp
GTTAAGCTAATAATCTTCGTCCTCCACACCCCCCCCCCCTCCCCTCTCTC
TCTCGCGTTCTCTGAAGTGATCCCCAGCTGGAAGAATGGGGCTGACTTTC
ACAAAGCTGTTCAGCCGGCTCTTTGCCAAGAAAGAGATGCGAATTCTAAT
GGTTGGTCTTGATGCTGCTGGTAAGACCACTATCTTGTACAAGCTCAAGC
TTGGAGAGATTGTCACCACAATTCCTACCATTGGGTTTAATGTGGAGACC
GTTGAATATAAAAACATCAGTTTCACTGTGTGGGATGTTGGTGGCCAGGA
CAAGATTCGTCCCTTGTGGAGGCATTATTTCCAGAACACTCAAGGTCTCA
TTTTTGTTGTGGACAGCAATGACAGAGACCGTATTGTAGAAGCAAGGGAT
GAATTGCATAGGATGTTGAATGAGGATGAGCTGCGAGATGCAGTGTTGCT
TGTATTTGCTAACAAACAGGATCTTCCAAATGCAATGAATGCTGCTGAGA
TTACTGATAAGCTTGGCCTCCACTCCCTCAGGCAGCGCCACTGGTACATC
CAGAGCACCTGTGCAACCTCTGGTGAGGGTCTTTATGAAGGTCTGGATTG
GCTCTCCAACAACATCGCTAACAAAGCCTGAAGCTGTTAAGATCTTTTTG
CGGACTGGCCATTCTGGATGCAGGGGTGAATATTATCTATTTTTTTTTTT
TTTTAACCCTTTTTGTTTGAGACGTTTGGGTTGTTGTGTTTTTTTGGTCC
TAGGATCTTTACAACTATATTGTAAAAGAAGAATTGTTTGGTTGGAAACA
TGTACTCCCAGGGTTTTGGCTCGGTTTAAAATTCTGGATTTTAAATTATT
TTTGTGGAAAAAAAAAAAAAAAAAAAAAAAACCCAACTTTTCTTGTCTAA
ATTTGCCTTTTAAAAAAAATTTTTCTTTTTATTTTTTTTGCAACCAAAAG
GGTCCTTTTCGGTTAAAATAAAATTTTTATTTTTCCCCTCGCTGTGAATC
CCCCCCAAATGGGAATTAATTTATAAGGGGCATAAACATTTTTTTTTTGG
GCCCCCCCCTGGCCGGGGGTTCTAAAAAATTTCTTGGAGGTTTATTTTTG
TCC
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