DY270948

Overview
NameDY270948
Unique NameDY270948
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1161
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: PDR11_YEAST (ATP-dependent permease PDR11 OS=Saccharomyces cerevisiae GN=PDR11 PE=1 SV=3)

HSP 1 Score: 147.517 bits (371), Expect = 1.398e-34
Identity = 92/214 (42.99%), Postives = 125/214 (58.41%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYP-KNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSII-FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPL 720
            +L++  SG    G LTALMG SGAGKTTL++VL+ R   G + G++ I G P  N + F R  G+ +Q D+H   +TV ESL  S  LR   D D      ++  V  L+ L S          V+ LS  QRK L+I VELV  PS++ F+DEPTSGLDA AA  +++ ++     G+ ++CTIHQPS  +   FD + LLKRGG  +Y G L
Sbjct:  764 KLINDASGYISSG-LTALMGESGAGKTTLLNVLSQRTESGVVTGELLIDGQPLTNIDAFRRSIGFVQQQDVHLELLTVRESLEISCVLRGDGDRD------YLGVVSNLLRLPSEKL-------VADLSPTQRKLLSIGVELVTKPSLLLFLDEPTSGLDAEAALTIVQFLKKLSMQGQAILCTIHQPSKSVISYFDNIYLLKRGGECVYFGSL 963          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB12G_ARATH (ABC transporter G family member 12 OS=Arabidopsis thaliana GN=ABCG12 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.398e-34
Identity = 98/253 (38.74%), Postives = 147/253 (58.10%), Query Frame = 1
Query:   85 QLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYI-EGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPGTWMLEVHNISFE 837
            +LL  ++G   PG + A+MG SG+GK+TL+D LAGR     I  G++ ++G  K       +  Y  Q DI    +TV E++ YSA LRLSSD+  ++    V+  +  + L+   D ++G     G+S  +RKR+++A+E++  P I+F+DEPTSGLD+ +A  V++ +RN   D GRTVV +IHQPS ++F  FD+L LL   G  +Y G    ES   +E+F A  G P  K+  NP    L   N  F+
Sbjct:   43 RLLDGLNGHAEPGRIMAIMGPSGSGKSTLLDSLAGRLARNVIMTGNLLLNG--KKARLDYGLVAYVTQEDILMGTLTVRETITYSAHLRLSSDLTKEEVNDIVEGTIIELGLQDCADRVIGNWHSRGVSGGERKRVSVALEILTRPQILFLDEPTSGLDSASAFFVIQALRNIARDGGRTVVSSIHQPSSEVFALFDDLFLLS-SGETVYFG----ESKFAVEFF-AEAGFPCPKKR-NPSDHFLRCINSDFD 286          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: WHITE_ANOGA (Protein white OS=Anopheles gambiae GN=w PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.826e-34
Identity = 93/256 (36.33%), Postives = 144/256 (56.25%), Query Frame = 1
Query:   79 RLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKIS--------GYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPG-VSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPGTWMLEV 819
            R  LL +V+G  + G L A+MG SGAGKTTL++ LA R   G     +KIS        G P N E       Y +Q+D+  P +T  E LL+ A LR+  DV    ++  V EV++ + L    D+++G PG + GLS  +RKRL  A E + +P ++  DEPTSGLD+  A  V++ ++     G+T++ TIHQPS +++  FD++LL+   GRV + G      ++  E+F  + G+P     YNP  + +++
Sbjct:  112 RKHLLKNVTGVAKSGELLAVMGSSGAGKTTLLNALAFRSPPG-----VKISPNAVRALNGVPVNAEQLRARCAYVQQDDLFIPSLTTREHLLFQAMLRMGRDVPASVKQHRVQEVLQELSLVKCADTIIGAPGRIKGLSGGERKRLAFASETLTDPHLLLCDEPTSGLDSFMAHSVLQVLKGMAMKGKTIILTIHQPSSELYCLFDKILLVAE-GRVAFLG----SPYQSAEFFSQL-GIP-CPPNYNPADFYVQM 355          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB6G_ARATH (ABC transporter G family member 6 OS=Arabidopsis thaliana GN=ABCG6 PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.826e-34
Identity = 72/221 (32.58%), Postives = 136/221 (61.54%), Query Frame = 1
Query:   58 TEGVGEDRLQ-LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            +EG+   + + LL+ ++G  R G + A++G SG+GK+TL+D LA R   G ++G++ ++G   N +    +S Y  Q+D+  P +TV E+L+++A  RL   +   K+ + V  +++ + L++  ++++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A  V++ ++    +G  V+ T+HQPS  +    D LL L RG  V    P
Sbjct:   97 SEGIFSSKTKTLLNGITGEARDGEILAVLGASGSGKSTLIDALANRIAKGSLKGNVTLNGEVLNSKMQKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKSKKSLRVQALIDQLGLRNAANTVIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSALSVIKVLKRIAQSGSMVIMTLHQPSYRLLRLLDRLLFLSRGQTVFSGSP 317          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB26G_ARATH (ABC transporter G family member 26 OS=Arabidopsis thaliana GN=ABCG26 PE=3 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.385e-34
Identity = 88/266 (33.08%), Postives = 157/266 (59.02%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLND--------SMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPGTWML-----EVHNISFENQL 846
            +L  ++G+  PG + ALMG SG+GKTTL+ ++ GR T   ++G +  +  P +     R+ G+  Q+D+  P +TV E+L ++A+LRL S +  +++   ++ +++ + L+   +        + VG   V G+S  +RKR +IA E++ +PS++ +DEPTSGLD+ +A  ++  ++     GRTV+ TIHQPS  +F  FD+LLL+  G    Y      ++ + +EYF ++  +P+I  A NP  ++L     +V +IS  ++L
Sbjct:  106 ILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDN-VKGKLTYNDIPYSPSVKRRI-GFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMIIKELGLERFIEKHNERCRRTRVGGGFVKGISGGERKRASIAYEILVDPSLLLLDEPTSGLDSTSATKLLHILQGVAKAGRTVITTIHQPSSRMFHMFDKLLLISEGHPAFYG-----KARESMEYFSSLRILPEI--AMNPAEFLLDLATGQVSDISLPDEL 362          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB1G_ARATH (ABC transporter G family member 1 OS=Arabidopsis thaliana GN=ABCG1 PE=2 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 5.314e-34
Identity = 72/226 (31.86%), Postives = 136/226 (60.18%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVP 765
            LL+++SG  R G + A++G SG+GK+TL+D LA R   G ++G +K++G          +S Y  Q+D+  P +TV E+L+++A  RL   +   K+K+ V  +++ + +++   +++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  +    D L+ L R G  +Y+G          E+   +P
Sbjct:  109 LLNNISGETRDGEIMAVLGASGSGKSTLIDALANRIAKGSLKGTVKLNGETLQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPILLFLDEPTSGLDSTSAFMVVKVLKRIAQSGSIVIMSIHQPSHRVLGLLDRLIFLSR-GHTVYSGSPASLPRFFTEFGSPIP 333          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 9.064e-34
Identity = 90/270 (33.33%), Postives = 153/270 (56.67%), Query Frame = 1
Query:   19 NMSYFVDMPAEMKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPGTWMLEVHN 825
            N+   + +  +   E    +   +L  V+G   PG   A++G SG+GK+TL++ +AGR  G  + G I I+     ++T  R +G+  Q+D+  P++TV E+L++ A LRL   +    +    + V+  + L    +++VG   + G+S  +RKR++IA EL+ NPS++ +DEPTSGLDA AA  +++T+       G+TVV +IHQPS  +F+ FD +LLL   G+ ++ G    +    + YFE+V   P      NP  ++L++ N
Sbjct:   60 NIKKLLGLKQKPSDETRSTEERTILSGVTGMISPGEFMAVLGPSGSGKSTLLNAVAGRLHGSNLTGKILINDGKITKQTLKR-TGFVAQDDLLYPHLTVRETLVFVALLRLPRSLTRDVKLRAAESVISELGLTKCENTVVGNTFIRGISGGERKRVSIAHELLINPSLLVLDEPTSGLDATAALRLVQTLAGLAHGKGKTVVTSIHQPSSRVFQMFDTVLLLSE-GKCLFVG----KGRDAMAYFESVGFSPAF--PMNPADFLLDLAN 321          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB2G_ARATH (ABC transporter G family member 2 OS=Arabidopsis thaliana GN=ABCG2 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.546e-33
Identity = 77/226 (34.07%), Postives = 133/226 (58.85%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVP 765
            LL+ +SG  R G + A++G SG+GK+TL+D LA R     + G I ++G          +S Y  Q+D+  P +TV E+L++SA  RL   +  KK+K  V  +++ + L+S   +++G  G  G+S  +R+R++I  +++ +P I+F+DEPTSGLD+ +A +V++ ++    +G  V+ +IHQPS  I    D+L+ L + G  +Y+G   H      E+   +P
Sbjct:  133 LLNGISGEAREGEMMAVLGASGSGKSTLIDALANRIAKDSLRGSITLNGEVLESSMQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKKKKKARVQALIDQLGLRSAAKTVIGDEGHRGVSGGERRRVSIGNDIIHDPIILFLDEPTSGLDSTSAYMVIKVLQRIAQSGSIVIMSIHQPSYRIMGLLDQLIFLSK-GNTVYSGSPTHLPQFFSEFKHPIP 357          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB16G_ARATH (ABC transporter G family member 16 OS=Arabidopsis thaliana GN=ABCG16 PE=2 SV=2)

HSP 1 Score: 144.05 bits (362), Expect = 1.546e-33
Identity = 68/210 (32.38%), Postives = 129/210 (61.43%), Query Frame = 1
Query:   88 LLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGP 717
            LL ++SG  R G + A++G SG+GK+TL+D LA R   G ++G + ++G          +S Y  Q+D+  P +TV E+L+++A  RL   +   K+K+ V  +++ + +++   +++G  G  G+S  +R+R++I ++++ +P ++F+DEPTSGLD+ +A +V++ ++   ++G  ++ +IHQPS  +    D L+ L RG  V    P
Sbjct:  107 LLDNISGETRDGEILAVLGASGSGKSTLIDALANRIAKGSLKGTVTLNGEALQSRMLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLPKSKKKLRVQALIDQLGIRNAAKTIIGDEGHRGISGGERRRVSIGIDIIHDPIVLFLDEPTSGLDSTSAFMVVKVLKRIAESGSIIIMSIHQPSHRVLSLLDRLIFLSRGHTVFSGSP 316          
BLAST of DY270948 vs. ExPASy Swiss-Prot
Match: AB11G_ARATH (ABC transporter G family member 11 OS=Arabidopsis thaliana GN=ABCG11 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 1.546e-33
Identity = 98/286 (34.27%), Postives = 160/286 (55.94%), Query Frame = 1
Query:   52 MKTEGVGEDRLQLLHSVSGAFRPGILTALMGVSGAGKTTLMDVLAGR-KTGGYIEGDIKISGYPKNQETFARVSGYCEQNDIHSPYVTVYESLLYSAWLRLSSDVDTKKRKMFVDEVMELVELKSLNDSMVGLPGVSGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGRVIYAGPLGHESHKLIEYFEAVPGVPKIKEAYNPGTWMLEVHNISFE----NQLGNDFVEFYANPSPSSK 894
            M T G GE +  +L  ++G   PG LTALMG SG+GK+T++D LA R     ++ G + ++G  K + +F   + Y  Q+D     +TV E++ YSA +RL   +   +++  V+  +  + L+   D+++G   + G+S  +++R++IA+E++  P ++F+DEPTSGLD+ +A  V +T+R     GRTV+ +IHQPS ++FE FD L LL  GG+ +Y G    ++    E+F A  G P      NP    L   N  F+       G+  + F A+  P  K
Sbjct:   58 MVTMGDGETQ-NVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFLSGTVLLNGR-KTKLSFG-TAAYVTQDDNLIGTLTVRETIWYSARVRLPDKMLRSEKRALVERTIIEMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALSRDGRTVIASIHQPSSEVFELFDRLYLLS-GGKTVYFG----QASDAYEFF-AQAGFP-CPALRNPSDHFLRCINSDFDKVRATLKGSMKLRFEASDDPLEK 333          
The following BLAST results are available for this feature:
BLAST of DY270948 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 272
Match NameE-valueIdentityDescription
PDR11_YEAST1.398e-3442.99ATP-dependent permease PDR11 OS=Saccharomyces cere... [more]
AB12G_ARATH1.398e-3438.74ABC transporter G family member 12 OS=Arabidopsis ... [more]
WHITE_ANOGA1.826e-3436.33Protein white OS=Anopheles gambiae GN=w PE=2 SV=1[more]
AB6G_ARATH1.826e-3432.58ABC transporter G family member 6 OS=Arabidopsis t... [more]
AB26G_ARATH2.385e-3433.08ABC transporter G family member 26 OS=Arabidopsis ... [more]
AB1G_ARATH5.314e-3431.86ABC transporter G family member 1 OS=Arabidopsis t... [more]
AB25G_ARATH9.064e-3433.33ABC transporter G family member 25 OS=Arabidopsis ... [more]
AB2G_ARATH1.546e-3334.07ABC transporter G family member 2 OS=Arabidopsis t... [more]
AB16G_ARATH1.546e-3332.38ABC transporter G family member 16 OS=Arabidopsis ... [more]
AB11G_ARATH1.546e-3334.27ABC transporter G family member 11 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YF19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270948 ID=DY270948; Name=DY270948; organism=Citrus clementina; type=EST; length=1161bp
CTTTCACTTACATTCTACAATATGAGCTACTTCGTGGATATGCCTGCAGA
AATGAAGACTGAAGGAGTTGGAGAAGATCGTCTTCAACTGCTACACAGTG
TCAGCGGTGCATTCAGGCCAGGAATATTGACAGCATTAATGGGTGTAAGT
GGTGCGGGGAAGACAACTCTGATGGATGTATTGGCAGGAAGGAAGACCGG
AGGATATATTGAAGGGGACATTAAAATTTCTGGTTACCCCAAAAACCAAG
AAACATTTGCTCGAGTGAGTGGTTATTGTGAACAGAATGACATTCATTCA
CCCTATGTTACTGTCTATGAATCTCTCCTCTACTCAGCATGGCTTCGTCT
TTCTTCAGACGTTGATACGAAAAAAAGAAAGATGTTTGTTGATGAAGTTA
TGGAGCTTGTTGAGCTCAAATCATTGAATGATTCTATGGTTGGCCTTCCC
GGAGTAAGTGGTCTTTCGACAGAGCAAAGGAAGAGATTGACGATTGCTGT
AGAATTGGTTGCTAACCCTTCTATCATCTTCATGGATGAGCCTACATCTG
GGCTTGATGCTAGAGCTGCTGCTATTGTCATGCGTACTGTTAGAAATACA
GTGGATACAGGGAGAACAGTTGTGTGTACAATCCACCAGCCAAGCATAGA
CATTTTTGAAGCATTTGACGAGCTATTGTTGTTGAAAAGAGGGGGCCGCG
TCATTTATGCTGGACCTCTTGGTCACGAATCTCACAAGCTCATAGAGTAT
TTTGAGGCTGTTCCAGGGGTTCCTAAAATTAAGGAAGCATACAATCCTGG
AACATGGATGCTGGAAGTCCATAACATTTCATTTGAGAATCAACTGGGAA
ATGATTTTGTTGAATTTTATGCCAATCCATCCCCTTCTTCAAAGAAAAAG
GGAACTTATCAAAAAGCTTATTACTCCCACCCCTGGCTCCGTCAATTCTC
TATTTCCAAACCAAAATATTCAACCAATTTTTAACCCAATTTTGGGGTTT
GTTTCTGGAAAAAAAATTTGGTTCTTTTTGGAAAAAACCCCCCAATAACA
AAGGGTTTCCCGATTTTGGCACGGGCCCCTTTGGCTCTTTTCCCTTTTTT
TTTGGTGTTTTTACTCTTCCGGGGGGAAAAAAAGGAGACAAAAAAAACTT
TCCCCAAAATA
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