DY270949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270949 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 2.269e-12 Identity = 34/104 (32.69%), Postives = 49/104 (47.12%), Query Frame = 2 Query: 245 RGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 556 R W EED +L Y+ Q+G W++V++ L R KSC RW NYL+P IK+G+LT +EQ L++ L +K GN+ Sbjct: 4 RQRWRPEEDAVLRAYVRQYGPREWHLVSQRMN---------------------------VALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNK 80 HSP 2 Score: 32.7278 bits (73), Expect = 2.269e-12 Identity = 13/32 (40.62%), Postives = 19/32 (59.38%), Query Frame = 3 Query: 666 RWSKIAQCLPGRTDNEIKNYWRTRVQKQARQL 761 +W KIA +PGRT + +W +KQ R+L Sbjct: 80 KWKKIAAEVPGRTAKRLGKWWEVFKEKQQREL 111
BLAST of DY270949 vs. ExPASy Swiss-Prot
Match: MYBB_CHICK (Myb-related protein B OS=Gallus gallus GN=MYBL2 PE=1 SV=1) HSP 1 Score: 47.3654 bits (111), Expect = 6.333e-12 Identity = 33/133 (24.81%), Postives = 52/133 (39.10%), Query Frame = 2 Query: 179 AARAAGTKRE---CNSSEEDQQELRRG----PWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 556 A R+ G ++ C ++ D E R G WT EED L + +G+ W +A N R+ + C+ RWL L PD+ +G T +E ++EL K+G + Sbjct: 2 ARRSRGEDQDELHCQDTDSDVPEQRDGRCKVKWTQEEDEQLKMLVRHYGQNDWKFLASHFPN------------------------------RSDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTK 104 HSP 2 Score: 45.0542 bits (105), Expect = 6.333e-12 Identity = 19/44 (43.18%), Postives = 32/44 (72.73%), Query Frame = 3 Query: 618 DEVLIEFNYAMLIGNFRWSKIAQCLPGRTDNEIKNYWRTRVQKQ 749 +E I F ++GN RW++IA+ LPGRTDN +KN+W + ++++ Sbjct: 141 EEDRIIFEAHKVLGN-RWAEIAKLLPGRTDNAVKNHWNSTIKRK 183
BLAST of DY270949 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 2.943e-11 Identity = 40/110 (36.36%), Postives = 59/110 (53.64%), Query Frame = 2 Query: 227 DQQELRRGPWTLEEDTLLTHYIHQHGEGRWNMVAKCAGN*IHA*KFFTS*CLLYMLVTKLA*LIISGLKRTGKSCRLRWLNYLKPDIKRGNLTPQEQFLILELHSKWGNR 556 D+ +++RGPW+ EED+ L YI ++G G GN I + +GL+R GKSCRLRWLNYL+P+IK G+ + +E +I L + G+R Sbjct: 8 DKTKVKRGPWSPEEDSKLRDYIEKYGNG---------GNWISF-------------------PLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89 The following BLAST results are available for this feature:
BLAST of DY270949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270949 ID=DY270949; Name=DY270949; organism=Citrus clementina; type=EST; length=1194bpback to top |