DY270954

Overview
NameDY270954
Unique NameDY270954
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1215
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3784 contig Ccv1_Contig3784:1..1215. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA3_ORYSJ (Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1)

HSP 1 Score: 392.504 bits (1007), Expect = 2.654e-108
Identity = 181/228 (79.39%), Postives = 207/228 (90.79%), Query Frame = 3
Query:  129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF 812
            LWYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IFATGILE+RWSGVGI+DWWRNEQFWVIGG S+HLFA+FQGLLKV+AGIDT+FTVTSK  DD+ +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV +DPF
Sbjct:  850 LWYGYGGGLKCLERFSYINSIVYPFTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFATGILEMRWSGVGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVIAGIDTSFTVTSKGGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1076          

HSP 2 Score: 80.4925 bits (197), Expect = 2.240e-14
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT 144
            +T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYG  T
Sbjct:  744 STLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSVT 791          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA6_ORYSJ (Probable cellulose synthase A catalytic subunit 6 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA6 PE=2 SV=1)

HSP 1 Score: 391.349 bits (1004), Expect = 5.912e-108
Identity = 181/228 (79.39%), Postives = 206/228 (90.35%), Query Frame = 3
Query:  129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF 812
            LWYGY G LK LER +YIN+IVYP TSIPL+AYCTLPA CLLT KFI PE++N AS+WF+ LFI IF TGILE+RWSGV I+DWWRNEQFWVIGG S+HLFAVFQGLLKVLAG+DT+FTVTSKA DD+ +F+ELY FKWT+LLIPPTT+L++N +G+VAGVS AIN+GY+SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIVIVWSILLASIFSLLWV +DPF
Sbjct:  849 LWYGYGGGLKFLERFSYINSIVYPWTSIPLLAYCTLPAICLLTGKFITPELTNVASLWFMSLFICIFVTGILEMRWSGVAIDDWWRNEQFWVIGGVSSHLFAVFQGLLKVLAGVDTSFTVTSKAGDDE-EFSELYTFKWTTLLIPPTTLLLLNFIGVVAGVSNAINNGYESWGPLFGKLFFAFWVIVHLYPFLKGLVGRQNRTPTIVIVWSILLASIFSLLWVRIDPF 1075          

HSP 2 Score: 80.1073 bits (196), Expect = 2.926e-14
Identity = 35/48 (72.92%), Postives = 40/48 (83.33%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT 144
            +T +E GG   + +PASLLKEAIHVISCGYEDKT+WGKEIGWIYG  T
Sbjct:  743 STLLENGGTLKSASPASLLKEAIHVISCGYEDKTDWGKEIGWIYGSIT 790          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA7_ORYSJ (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1)

HSP 1 Score: 389.808 bits (1000), Expect = 1.720e-107
Identity = 179/229 (78.17%), Postives = 205/229 (89.52%), Query Frame = 3
Query:  129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGD-FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF 812
            LWY Y GRLK LER AY NTIVYP TSIPL+AYCT+PA CLLT KFIIP ++N AS+WFI LF+SI ATG+LE+RWSGV IEDWWRNEQFWVIGG SAHLFAVFQGLLKVL G+DTNFTVTSKA+ D+ D F ELY+FKWT+LL+PPTT++I+N+VGIVAGVS A+N+GY SWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WV +DPF
Sbjct:  819 LWYAYGGRLKWLERFAYTNTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTLNNLASIWFIALFLSIIATGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLGGVDTNFTVTSKAAADETDAFGELYLFKWTTLLVPPTTLIIINMVGIVAGVSDAVNNGYGSWGPLFGKLFFSFWVILHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPF 1047          

HSP 2 Score: 77.411 bits (189), Expect = 1.896e-13
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query:    1 ATFMEQGGIPP--TTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT 144
            +T +E GG+P     +PA+L+KEAIHVISCGYE+KTEWGKEIGWIYG  T
Sbjct:  711 STLVEDGGLPQGAAADPAALIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 760          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSJ (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA4 PE=2 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 8.538e-107
Identity = 179/240 (74.58%), Postives = 215/240 (89.58%), Query Frame = 3
Query:  129 LWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF--TSDETKTNS 839
            LWYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RWSG+GIEDWWRNEQFWVIGG SAHLFAVFQG+LK++AG+DTNFTVT+KA+DD  +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV +DPF  +S+ T TNS
Sbjct:  745 LWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT-EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNS 983          

HSP 2 Score: 86.2705 bits (212), Expect = 4.083e-16
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT----MGD*SFWRDWRTL 183
            +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYG  T     G     R WR++
Sbjct:  639 STLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSI 703          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA4_ORYSI (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA4 PE=2 SV=2)

HSP 1 Score: 387.497 bits (994), Expect = 8.538e-107
Identity = 179/240 (74.58%), Postives = 215/240 (89.58%), Query Frame = 3
Query:  129 LWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF--TSDETKTNS 839
            LWYGY G RLK L+RL+YINTIVYP TS+PLIAYC LPA CLLT KFIIP +SN A++WF+ LFISI  T +LE+RWSG+GIEDWWRNEQFWVIGG SAHLFAVFQG+LK++AG+DTNFTVT+KA+DD  +F ELYVFKWT++LIPPT++L++NLVG+VAG S A+NSGY+SWGPLFGK+FFA+WVI HLYPFLKGL+GRQNRTPTIV++WS+LLAS+FSLLWV +DPF  +S+ T TNS
Sbjct:  745 LWYGYGGGRLKWLQRLSYINTIVYPFTSLPLIAYCCLPAICLLTGKFIIPTLSNAATIWFLGLFISIIVTSVLELRWSGIGIEDWWRNEQFWVIGGVSAHLFAVFQGILKMIAGLDTNFTVTAKATDDT-EFGELYVFKWTTVLIPPTSILVLNLVGVVAGFSDALNSGYESWGPLFGKVFFAMWVIMHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLLWVKIDPFIGSSETTTTNS 983          

HSP 2 Score: 86.2705 bits (212), Expect = 4.083e-16
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT----MGD*SFWRDWRTL 183
            +T ME GG+P + NP++L+KEAIHVISCGYE+KTEWGKEIGWIYG  T     G     R WR++
Sbjct:  639 STLMENGGVPESANPSTLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWRSI 703          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA7_ARATH (Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1)

HSP 1 Score: 387.111 bits (993), Expect = 1.115e-106
Identity = 181/229 (79.04%), Postives = 205/229 (89.52%), Query Frame = 3
Query:  129 LWYGYNG-RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPF 812
            LWYGY G +LK LER AY NT +YP TSIPL+AYC LPA CLLT+KFI+P IS FAS++FI LF+SI  TGILE+RWSGV IE+WWRNEQFWVIGG SAHLFAV QGLLK+LAGIDTNFTVTSKA+DDD DF ELY FKWT+LLIPPTTVLI+N+VG+VAG+S AIN+GYQSWGPLFGKLFF+ WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWV +DPF
Sbjct:  783 LWYGYKGGKLKWLERFAYANTTIYPFTSIPLLAYCILPAICLLTDKFIMPPISTFASLFFISLFMSIIVTGILELRWSGVSIEEWWRNEQFWVIGGISAHLFAVVQGLLKILAGIDTNFTVTSKATDDD-DFGELYAFKWTTLLIPPTTVLIINIVGVVAGISDAINNGYQSWGPLFGKLFFSFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPF 1010          

HSP 2 Score: 87.4261 bits (215), Expect = 1.833e-16
Identity = 40/65 (61.54%), Postives = 49/65 (75.38%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT----MGD*SFWRDWRTL 183
            +T ME+GG+PP+++PA LLKEAIHVISCGYEDKTEWG E+GWIYG  T     G     R WR++
Sbjct:  677 STLMEEGGVPPSSSPAVLLKEAIHVISCGYEDKTEWGTELGWIYGSITEDILTGFKMHCRGWRSI 741          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA4_ARATH (Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1)

HSP 1 Score: 385.956 bits (990), Expect = 2.484e-106
Identity = 180/234 (76.92%), Postives = 208/234 (88.89%), Query Frame = 3
Query:  129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPFTSDET 827
            LWY + G+LK+LERLAYINTIVYP TSIPL+AYCT+PA CLLT KFIIP I+NFAS+WF+ LF+SI AT ILE+RWSGV I D WRNEQFWVIGG SAHLFAVFQGLLKVL G+DTNFTVTSK ASD+  +F +LY+FKWT+LLIPPTT++I+N+VG+VAGVS AIN+GY SWGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WSILLASIFSL+WV +DPF   +T
Sbjct:  805 LWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNFASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGVDTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQT 1038          

HSP 2 Score: 84.7297 bits (208), Expect = 1.188e-15
Identity = 36/48 (75.00%), Postives = 41/48 (85.42%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT 144
            +T ME GG+P  TN +SL+KEAIHVISCGYE+KTEWGKEIGWIYG  T
Sbjct:  699 STLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVT 746          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSJ (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 7.227e-106
Identity = 182/231 (78.79%), Postives = 208/231 (90.04%), Query Frame = 3
Query:  129 LWYGY-NGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS-DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPFT 815
            L YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RWSGV IE+WWRNEQFWVIGG SAHLFAV QGLLKVLAGIDTNFTVTSKA+ D+D +FAELY FKWT+LLIPPTT+LI+N++G+VAGVS AIN+G ++WGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWV +DPFT
Sbjct:  810 LLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFT 1040          

HSP 2 Score: 86.6557 bits (213), Expect = 3.126e-16
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT----MGD*SFWRDWRTL 183
            +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYG  T     G     R WR++
Sbjct:  704 STLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSV 768          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA9_ORYSI (Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 7.227e-106
Identity = 182/231 (78.79%), Postives = 208/231 (90.04%), Query Frame = 3
Query:  129 LWYGY-NGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKAS-DDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPFT 815
            L YGY NG LK LER +YINT +YP TS+PL+AYCTLPA CLLT KFI+P IS FAS++FI LFISIFATGILE+RWSGV IE+WWRNEQFWVIGG SAHLFAV QGLLKVLAGIDTNFTVTSKA+ D+D +FAELY FKWT+LLIPPTT+LI+N++G+VAGVS AIN+G ++WGPLFGKLFFA WVI HLYPFLKGL+GRQNRTPTIV++WS+LLASIFSLLWV +DPFT
Sbjct:  810 LLYGYKNGNLKWLERFSYINTTIYPFTSLPLLAYCTLPAVCLLTGKFIMPPISTFASLFFIALFISIFATGILEMRWSGVSIEEWWRNEQFWVIGGVSAHLFAVVQGLLKVLAGIDTNFTVTSKATGDEDDEFAELYAFKWTTLLIPPTTLLILNIIGVVAGVSDAINNGSEAWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVIWSVLLASIFSLLWVRIDPFT 1040          

HSP 2 Score: 86.6557 bits (213), Expect = 3.126e-16
Identity = 39/65 (60.00%), Postives = 50/65 (76.92%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT----MGD*SFWRDWRTL 183
            +T ME+GG+PP+++PA+LLKEAIHVISCGYEDKT+WG E+GWIYG  T     G     R WR++
Sbjct:  704 STLMEEGGVPPSSSPAALLKEAIHVISCGYEDKTDWGLELGWIYGSITEDILTGFKMHCRGWRSV 768          
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CESA9_ARATH (Probable cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Arabidopsis thaliana GN=CESA9 PE=2 SV=1)

HSP 1 Score: 373.244 bits (957), Expect = 1.666e-102
Identity = 167/232 (71.98%), Postives = 206/232 (88.79%), Query Frame = 3
Query:  129 LWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPFTSDE 824
            +WYGY G LK LER +YIN++VYP TS+PL+ YC+LPA CLLT KFI+PEISN+A + F+L+F+SI  TGILE++W  +GI+DWWRNEQFWVIGG S+HLFA+FQGLLKVLAG+ TNFTVTSKA+ DDG+F+ELY+FKWTSLLIPPTT+LI+N+VG++ GVS AIN+GY SWGPLFG+LFFA+WVI HLYPFLKGLLG+Q+R PTI++VWSILLASI +LLWV V+PF S +
Sbjct:  845 IWYGYGGGLKWLERFSYINSVVYPWTSLPLLVYCSLPAICLLTGKFIVPEISNYAGILFLLMFMSIAVTGILEMQWGKIGIDDWWRNEQFWVIGGVSSHLFALFQGLLKVLAGVSTNFTVTSKAA-DDGEFSELYIFKWTSLLIPPTTLLIINIVGVIVGVSDAINNGYDSWGPLFGRLFFALWVIVHLYPFLKGLLGKQDRVPTIILVWSILLASILTLLWVRVNPFVSKD 1075          

HSP 2 Score: 78.5666 bits (192), Expect = 8.513e-14
Identity = 33/48 (68.75%), Postives = 39/48 (81.25%), Query Frame = 1
Query:    1 ATFMEQGGIPPTTNPASLLKEAIHVISCGYEDKTEWGKEIGWIYGMAT 144
            +T +  GG+P   NPASLL+E+I VISCGYE+KTEWGKEIGWIYG  T
Sbjct:  739 STLLLNGGVPSNVNPASLLRESIQVISCGYEEKTEWGKEIGWIYGSVT 786          
The following BLAST results are available for this feature:
BLAST of DY270954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
CESA3_ORYSJ2.654e-10879.39Probable cellulose synthase A catalytic subunit 3 ... [more]
CESA6_ORYSJ5.912e-10879.39Probable cellulose synthase A catalytic subunit 6 ... [more]
CESA7_ORYSJ1.720e-10778.17Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ORYSJ8.538e-10774.58Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA4_ORYSI8.538e-10774.58Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA7_ARATH1.115e-10679.04Cellulose synthase A catalytic subunit 7 [UDP-form... [more]
CESA4_ARATH2.484e-10676.92Cellulose synthase A catalytic subunit 4 [UDP-form... [more]
CESA9_ORYSJ7.227e-10678.79Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ORYSI7.227e-10678.79Cellulose synthase A catalytic subunit 9 [UDP-form... [more]
CESA9_ARATH1.666e-10271.98Probable cellulose synthase A catalytic subunit 9 ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionKN0AAP8YG01FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270954 ID=DY270954; Name=DY270954; organism=Citrus clementina; type=EST; length=1215bp
GCTACCTTCATGGAACAGGGAGGCATTCCACCGACAACTAATCCTGCAAG
TCTTCTAAAGGAAGCAATCCATGTTATTAGTTGTGGTTATGAGGACAAGA
CTGAATGGGGCAAAGAGATTGGATGGATCTATGGTATGGCTACAATGGGA
GATTGAAGCTTTTGGAGAGACTGGCGTACATTAACACTATTGTCTACCCA
CTGACCTCCATCCCACTAATTGCTTACTGCACGCTTCCTGCTTTTTGCCT
TCTTACTAATAAATTCATCATTCCAGAGATAAGCAACTTTGCTAGCATGT
GGTTTATTCTACTTTTCATTTCCATTTTTGCTACTGGAATACTGGAGATT
AGATGGAGTGGGGTTGGTATTGAGGACTGGTGGAGGAATGAACAGTTCTG
GGTCATTGGTGGAACATCAGCACATCTATTTGCTGTTTTCCAAGGTCTCT
TGAAAGTGCTTGCTGGGATTGATACCAACTTTACTGTCACTTCAAAGGCT
TCTGATGATGATGGAGATTTTGCAGAGCTTTATGTATTCAAATGGACATC
TCTTCTCATCCCTCCAACTACAGTCCTGATTGTGAACTTGGTGGGTATTG
TAGCTGGTGTATCATGGGCCATAAACAGTGGTTACCAATCATGGGGTCCA
CTCTTTGGCAAGCTATTCTTTGCCATATGGGTCATTGCCCATCTGTATCC
TTTCCTGAAAGGTCTGTTGGGTCGTCAAAACCGCACACCAACAATTGTCA
TTGTGTGGTCTATCCTACTTGCTTCCATTTTCTCCTTGCTGTGGGTGGCT
GTTGATCCCTTTACCTCCGATGAAACCAAAACCAATTCAAAACGGCCAAT
GTTGGCAACCAATTGCTAGTGCATGTTGGAAGATTAATTTGTGGCCCCAA
ATGCCATTTCTTCCCTCAATCCCCCCTCCATGTAAAATAAAAAAAAATTA
ATTTTCATGGGAAAAAGGATCGAAATTTAATTTTCTTTCTCCCTCCCGCC
TGGACAAAAAGGAAAATTGAATATAAACGGGATCTCTTTTTCCTTTTCCC
CGGTGAACACCAAACTAGGGAAAGAACTACAAGGGTTTTAAACAAAAACC
CCTTTTTTTTTGTAATTCTATTTTCTAAAAAATTTTATTTTCTTATAATA
TCCTTTTTTTATAACTAATCCCTCCATACCAGGGAGGATCTGGGGGGGTG
TGTGATGGCGCCCCC
back to top