DY270954
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF7_ORYSJ (Probable mixed-linked glucan synthase 7 OS=Oryza sativa subsp. japonica GN=CSLF7 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 2.147e-33 Identity = 84/219 (38.36%), Postives = 120/219 (54.79%), Query Frame = 3 Query: 138 GYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLT-----NKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--------ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVA---GVSW----AINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNR 734 G RL L+R AY+NT VYP TS+ L+AYC PA L+ N P F + L +++ A +LE RWSG+ + +WWRNEQFW++ TSA+L AV Q LKV G + +F +TSK + D +AELY +WT+L+ P L VN+ + A G W A ++ + L + F +WV+ HLYPF GL+GR+++ Sbjct: 589 GGRRRLHPLQRAAYLNTTVYPFTSLFLMAYCLFPAIPLIAGGGGWNAAPTPTYVAFLAA----LMVTLAAVAVLETRWSGIALGEWWRNEQFWMVSATSAYLAAVAQVALKVATGKEISFKLTSKHLASSATPVAGKDRQYAELYAVRWTALMAPTAAALAVNVASMAAAGGGGRWWWWDAPSAAAAAAAAL--PVAFNVWVVVHLYPFALGLMGRRSK 801
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF4_ORYSJ (Mixed-linked glucan synthase 4 OS=Oryza sativa subsp. japonica GN=CSLF4 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 2.222e-30 Identity = 70/223 (31.39%), Postives = 125/223 (56.05%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNL--VGIVAG--VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVA 800 RL L+R+AY+N YP+ ++ + Y P L++ ++ I + ++ + + I G+ E++WSG+ + DW RNEQF++IG T + AV LK+ G +F +TSK + GD FA+LY +W LLIP VL VN+ VG+ G +W + + + L + F +W++A LYPF G++G++ + P ++ V +++ + ++++ A Sbjct: 650 RLHPLQRIAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQQPFGEYLLYLVAIIAMIHVIGMFEVKWSGITVLDWCRNEQFYMIGSTGVYPTAVLYMALKLFTGKGIHFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVVLAVNVGAVGVAVGKAAAWGLLTEQGRFAVL--GMVFNVWILALLYPFALGIMGQRGKRPAVLFVATVMAVAAVAIMYAA 870
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF8_ORYSJ (Probable mixed-linked glucan synthase 8 OS=Oryza sativa subsp. japonica GN=CSFL8 PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 2.902e-30 Identity = 74/236 (31.36%), Postives = 122/236 (51.69%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKV--LAGIDTNFTVTSKASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY--QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAVDPFTSDETKTNSKR 845 RL ++R+AYIN YP+TS+ L+ Y P + F I + ++ +++ G++EI+W+G+ + DW RNEQF++IG T+ + AV +LK L G+ T AS FAELY +W LL P V+ VN+ I A + A+ G+ G L F +W++ +YPF G++GR ++ P I+ V ++ I +L +A+ S + + +R Sbjct: 639 RLNFMQRIAYINMTGYPVTSVFLLFYLLFPVIWIFRGIFYIQKPFPTYVLYLVIVIFMSEMIGMVEIKWAGLTLLDWIRNEQFYIIGATAVYPLAVLHIVLKCFGLKGVSFKLTAKQVASSTSEKFAELYDVQWAPLLFPTIVVIAVNICAIGAAIGKALFGGWSLMQMGDASLGLVFNVWILLLIYPFALGIMGRWSKRPYILFVLIVISFVIIALADIAIQAMRSGSVRLHFRR 874
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSI (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. indica GN=CSLF3 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.440e-29 Identity = 76/239 (31.80%), Postives = 136/239 (56.90%), Query Frame = 3 Query: 123 MDLWYGYNG------RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAG---VSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVA 800 +++++ +N RL+ L+R++Y+N +YP+TS+ ++ Y P L+ ++ I ++ +++ + I G LEI+W+G+ D+WRNEQF++IG TSA+ AV ++ +L +F VTSK +D + FA+LY +W +LIP VL+ N+ +G+ G V + + Q + G L F +WV+ LYPF ++GR + P I++V ++ I +L++VA Sbjct: 620 LEMFFSHNNPLIGGRRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLMIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKMAVYMGVWTIAQKRHAIMG-LLFNMWVMFLLYPFALAIMGRWAKRPIILVVLLPIIFVIVALVYVA 857
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF1_ORYSJ (Putative mixed-linked glucan synthase 1 OS=Oryza sativa subsp. japonica GN=CSFL1 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 7.148e-29 Identity = 67/226 (29.65%), Postives = 118/226 (52.21%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVA 800 RL L+R+AY+N YP+ ++ + Y P L++ ++ I ++ + + I G+ E++W+G+ + DW RNEQF++IG T + AV LK++ G F +TSK A+ FA+LY +W LLIP +++VN+ + V A +WGPL + F +W++ LYPF G++G+ + P ++ V + + + ++VA Sbjct: 611 RLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTAASSGDKFADLYTVRWVPLLIPTIVIMVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVA 831
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF2_ORYSJ (Mixed-linked glucan synthase 2 OS=Oryza sativa subsp. japonica GN=CSLF2 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.219e-28 Identity = 68/226 (30.09%), Postives = 119/226 (52.65%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK-ASDDDGD-FAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGK-------LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVA 800 RL L+R+AY+N YP+ ++ + Y P L++ ++ I ++ + + I G+ E++W+G+ + DW RNEQF++IG T + AV LK++ G F +TSK + GD FA+LY +W LLIP +++VN+ + V A +WGPL + F +W++ LYPF G++G+ + P ++ V + + + ++VA Sbjct: 641 RLHPLQRVAYLNMSTYPIVTVFIFFYNLFPVMWLISEQYYIQRPFGEYLLYLVAVIAMIHVIGMFEVKWAGITLLDWCRNEQFYMIGSTGVYPTAVLYMALKLVTGKGIYFRLTSKQTTASSGDKFADLYTVRWVPLLIPTIVIIVVNVAAVGVAVGKA-----AAWGPLTEPGWLAVLGMVFNVWILVLLYPFALGVMGQWGKRPAVLFVAMAMAVAAVAAMYVA 861
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF3_ORYSJ (Probable mixed-linked glucan synthase 3 OS=Oryza sativa subsp. japonica GN=CSLF3 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 2.716e-28 Identity = 75/243 (30.86%), Postives = 135/243 (55.56%), Query Frame = 3 Query: 123 MDLWYGYNG------RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNL--VGIVAGVS------WAI-NSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVA 800 +++++ +N RL+ L+R++Y+N +YP+TS+ ++ Y P L+ ++ I ++ +++ + I G LEI+W+G+ D+WRNEQF++IG TSA+ AV ++ +L +F VTSK +D + FA+LY +W +LIP VL+ N+ +G+ G + W I + + G L F +WV+ LYPF ++GR + I++V ++ I +L++VA Sbjct: 620 LEMFFSHNNPLIGGRRLQPLQRVSYLNMTIYPVTSLFILLYAISPVMWLIPDEVYIQRPFTRYVVYLLVIILMIHMIGWLEIKWAGITWLDYWRNEQFFMIGSTSAYPTAVLHMVVNLLTKKGIHFRVTSKQTTADTNDKFADLYEMRWVPMLIPTMVVLVANIGAIGVAIGKTAVYMGVWTIAQKRHAAMG-----LLFNMWVMFLLYPFALAIMGRWAKRSIILVVLLPIIFVIVALVYVA 857
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLF9_ORYSJ (Probable mixed-linked glucan synthase 9 OS=Oryza sativa subsp. japonica GN=CSLF9 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 3.922e-27 Identity = 76/225 (33.78%), Postives = 122/225 (54.22%), Query Frame = 3 Query: 150 RLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTN-KFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGI-DTNFTVTSK--ASDDDGDFAELYVFKWTSLLIPPTTVLIVNLVGIVAGVSWAINSGY---QSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVAV 803 RL+ ++R+AY N YP++++ ++ Y LP L + +F I + + + + + I G++EI+W+G+ + DWWRNEQF++IG T +L AV +LK L G+ F +T+K A FAELY W+ LL P V+ VN+ I A A+ G+ Q G G L F +WV+ LYPF G++GR ++ P + + + + +VAV Sbjct: 627 RLRPMQRVAYANMTAYPVSALFMVVYDLLPVIWLSHHGEFHIQKPFSTYVAYLVAVIAMIEVIGLVEIKWAGLTLLDWWRNEQFYMIGATGVYLAAVLHIVLKRLLGLKGVRFKLTAKQLAGGARERFAELYDVHWSPLLAPTVVVMAVNVTAIGAAAGKAVVGGWTPAQVAGASAG-LVFNVWVLVLLYPFALGIMGRWSKRPCALFALLVAACAAVAAGFVAV 850
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLG1_ARATH (Cellulose synthase-like protein G1 OS=Arabidopsis thaliana GN=CSLG1 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 3.115e-16 Identity = 64/221 (28.96%), Postives = 102/221 (46.15%), Query Frame = 3 Query: 84 WL*GQD*MGQRDWMDLWYGYNGRLKLLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFA--ELYVFKW---TSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGPLFGKLFFAIWVIAHLYPFLKGLLGRQN 731 W G M + + YG L LL L Y N+ P SIPL Y LP L++ + P+ S+ +I+LF +A + + G WW +++ +I G S+ F + +LK L F VTSKA+DDD E +F + +S+ +P TTV IVNL+ V G+ + G G L+ +L + + + P ++ R++ Sbjct: 489 WAVGLFEMSFSKYSPITYGIKS-LDLLMGLGYCNSPFKPFWSIPLTVYGLLPQLALISGVSVFPKASDPWFWLYIILFFGAYAQDLSDFLLEGGTYRKWWNDQRMLMIKGLSSFFFGFIEFILKTLNLSTPKFNVTSKANDDDEQRKRYEQEIFDFGTSSSMFLPLTTVAIVNLLAFVWGLYGILFCG----GELYLELMLVSFAVVNCLPIYGAMVLRKD 704
BLAST of DY270954 vs. ExPASy Swiss-Prot
Match: CSLG3_ARATH (Cellulose synthase-like protein G3 OS=Arabidopsis thaliana GN=CSLG3 PE=2 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 5.313e-16 Identity = 59/195 (30.26%), Postives = 95/195 (48.72%), Query Frame = 3 Query: 159 LLERLAYINTIVYPLTSIPLIAYCTLPAFCLLTNKFIIPEISNFASMWFILLFISIFATGILEIRWSGVGIEDWWRNEQFWVIGGTSAHLFAVFQGLLKVLAGIDTNFTVTSKASDDDGDFA--ELYVFKW---TSLLIPPTTVLIVNLVGIVAGVSWAINSGYQSWGP-LFGKLFFAIWVIAHLYPFLKGLLGR 725 L+ + Y + S+PLI Y LP LL + P+ S+ +I+LF+ + +L+ G WW +++ W I G S+HLF + LK L F VTSKA+DD+ E +F++ +S+ +P TTV IVNL+ V G+ G +WG L +L A + + + P + ++ R Sbjct: 532 LVTGVGYCQYACWAFWSLPLIVYGFLPQLALLYQSSVFPKSSDPWFWLYIVLFLGAYGQDLLDFVLEGGTYGGWWNDQRMWSIRGFSSHLFGFIEFTLKTLNLSTHGFNVTSKANDDEEQSKRYEKEIFEFGPSSSMFLPLTTVAIVNLLAFVWGL-----YGLFAWGEGLVLELMLASFAVVNCLPIYEAMVLR 721 The following BLAST results are available for this feature:
BLAST of DY270954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270954 ID=DY270954; Name=DY270954; organism=Citrus clementina; type=EST; length=1215bpback to top |