DY270967

Overview
NameDY270967
Unique NameDY270967
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1252
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 1.036e-14
Identity = 47/168 (27.98%), Postives = 84/168 (50.00%), Query Frame = 3
Query:  255 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSMNHNTHSCMDPNGMETK 758
            F  + E+ V+  +   + + +  +  +D    GAG AGL+ A+ L++    ++ I+EQ+   GGG WL G   + + +R PA   LDEL + Y+     +      L  + + ++ L     ++ N    +D+IV+  RV GVV NW+ V       +C+DP G+  +
Sbjct:    3 FARVNEADVTEAILDGFYSSLKKHLRSDVIVVGAGPAGLTAAWRLAE-AGARVLIVEQNNYLGGGLWLGGYFMNPVTIRAPAQRILDELEVPYEAVKPGLYRTKGPLLAAKLAARAL-EAGAEVLNLTMLDDVIVENSRVAGVVVNWSPVQGLPRQITCVDPVGLRAE 168          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_HALMA (Putative thiazole biosynthetic enzyme OS=Haloarcula marismortui GN=rrnAC1782 PE=3 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 1.353e-14
Identity = 51/172 (29.65%), Postives = 88/172 (51.16%), Query Frame = 3
Query:  252 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDY----DEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGME 752
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A EL++   +Q+ ++E++   GGG WL G L + + VR PA   LDEL +D+    D +  YV     A    + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +E
Sbjct:    9 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELAER-GVQVMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQQVLDELEVDHKRSKDSEGLYVANGPEA---CSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVE 176          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.309e-14
Identity = 56/173 (32.37%), Postives = 88/173 (50.87%), Query Frame = 3
Query:  252 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDS----YVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGMET 755
            +F  + E+ V+R + + +  + I   DT+    G G +GL  A EL++   + + I+E++   GGG WL G L + + VR PA   LDEL + Y+E D     YV     A+ +S I S   A   V+  N     D++ +   RVGG+V NW  V       +C+DP  +E+
Sbjct:    5 EFADVSEAQVTRAIAKDWGNEFIDRVDTEVIIVGGGPSGLVTAKELAER-GVDVTIVEKNNYLGGGFWLGGFLMNKVTVRDPAQSVLDELDVPYEESDEASGLYVADGPHAV-SSLIKSACDAGAEVQ--NMTEFTDVVTRENHRVGGIVLNWTPVHALPRELTCVDPVAVES 173          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_NATPD (Putative thiazole biosynthetic enzyme OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=NP5174A PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 3.938e-14
Identity = 49/169 (28.99%), Postives = 86/169 (50.89%), Query Frame = 3
Query:  252 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD-EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGME 752
            +F  + E+ V+R + + +  + + ++D+D    G G +GL  A ELS+   +Q  ++E++   GGG WL G L + + VR PA   L++L +D+   QDS  +         + + K       K+ N     D++++   RVGG+V NW  V       +C+DP  +E
Sbjct:    6 QFSDVGEAEVTRAIGQEWTEEFMDFSDSDVIIVGGGPSGLMAAKELSER-GVQTMVVEKNNYLGGGFWLGGFLMNKVTVRDPAQNVLEDLDVDFKRSQDSEGLYVANGPEACSGLIKAACDAGAKMQNMTEFTDIVIREDHRVGGIVMNWTPVHALPREITCVDPIAVE 173          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 6.717e-14
Identity = 53/170 (31.18%), Postives = 88/170 (51.76%), Query Frame = 3
Query:  264 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGMETKV 761
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +S   + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     H  +DP  + TK+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVT-TQRLH--VDPLMIRTKL 164          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_DESOH (Putative thiazole biosynthetic enzyme OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=Dole_2426 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.496e-13
Identity = 48/151 (31.79%), Postives = 79/151 (52.32%), Query Frame = 3
Query:  264 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYD--EQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNWALVSM 710
            + E  +SR +  R+   +I   + D    G G +GL  A+ L++    ++A+ E+ +S GGG W    LF+ +VV+K A   LD + I Y    +D Y      A+ T T  +   A+  V +FN V  ED++++  R+ G+V NW+ V M
Sbjct:    3 LNEVTISRAIIDRFYEKLIANLEVDVAVVGGGPSGLVAAWRLARAGR-KVALFERKLSIGGGMWGGAMLFNEIVVQKSALHVLDAMEIGYRLYAEDYYTADAVEAISTLTSQA---AKAGVAIFNCVTVEDVMIRPDRIVGLVLNWSPVEM 149          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_FERNB (Putative thiazole biosynthetic enzyme OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=Fnod_1422 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.552e-13
Identity = 43/144 (29.86%), Postives = 74/144 (51.39%), Query Frame = 3
Query:  264 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGGRVGGVVTNW 695
            +K+  +S+ + + Y   +    + D    G G + L+ A EL+KN   ++AI E    PGGG W  G +F+ +V+      +L E  I Y ++D ++V+   A+  ++ M     +    +FN V  EDL++   R+ GVV NW
Sbjct:    3 MKDLKISQLIVKHYFQKLNDVLNVDVAIAGCGPSALALATELAKNGR-KVAIFEAKNEPGGGIWGGGMMFNELVLESELEWYLKEHHIKYKKEDEFIVVD--AVHFASAMLYNATKNGAYIFNNVFVEDLVMYNERISGVVINW 143          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_METMA (Putative thiazole biosynthetic enzyme OS=Methanosarcina mazei GN=MM_0222 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.354e-13
Identity = 53/170 (31.18%), Postives = 86/170 (50.59%), Query Frame = 3
Query:  264 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGMETKV 761
            + E I++R +   Y    + Y D D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +    + ++       + KL+A       ++FN V+ ED++++   RV G+V NW  V+     H  +DP  + TK+
Sbjct:    3 LDEVIITRAIFEEYSKTFLEYTDIDVALVGGGPANLVAAKYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRVLDDFGIRYKEYEPGYFVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIRENDRVTGIVINWGPVT-TQRLH--VDPLMIRTKL 164          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 5.686e-13
Identity = 54/168 (32.14%), Postives = 83/168 (49.40%), Query Frame = 3
Query:  264 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDE-QDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK-GGRVGGVVTNWALVSMNHNTHSCMDPNGMETKV 761
            + E I++R +   Y    + Y + D    G G A L  A  L++    ++AI EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E Q  Y V          I     A    ++FN V+ ED++++   RV G+V NW  V++    H  +DP  + TK+
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTEVDVALIGGGPANLVAARYLAE-AGAKVAIYEQKLSLGGGMWAGGMMFPRIVVQEEACRILDDFGIRYKEYQPGYYVANSVESVGKLISGATSA--GAEVFNLVSFEDVMIRENDRVTGIVVNWGPVTV-QRLH--VDPLMIRTKL 164          
BLAST of DY270967 vs. ExPASy Swiss-Prot
Match: THI4_SULAC (Putative thiazole biosynthetic enzyme OS=Sulfolobus acidocaldarius GN=Saci_0854 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.072e-11
Identity = 45/158 (28.48%), Postives = 78/158 (49.37%), Query Frame = 3
Query:  243 NTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGG--RVGGVVTNWALVSM 710
            ++ K   I E  +SR + ++ M D + + + D    GAG AG+S AY L+K+  ++  + E+ +S GGG      LF  +V+  PA   L E+ I  ++ +  V I  +A F + + +  +     K+ + V  +D+I +    RV GV   W    M
Sbjct:    3 DSIKIKAIDEVKISRYIIKQTMEDWMNFVENDVVIVGAGPAGMSAAYYLAKH-GLKTLVFERRLSFGGGIGGGAMLFHKLVIESPADEVLKEMNIRLEKVEDGVYIVDSAEFMAKLAASAI-DAGAKIIHGVTVDDVIFRENPLRVAGVAVEWTATQM 158          
The following BLAST results are available for this feature:
BLAST of DY270967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
THI4_AERPE1.036e-1427.98Putative thiazole biosynthetic enzyme OS=Aeropyrum... [more]
THI4_HALMA1.353e-1429.65Putative thiazole biosynthetic enzyme OS=Haloarcul... [more]
THI4_HALWD2.309e-1432.37Putative thiazole biosynthetic enzyme OS=Haloquadr... [more]
THI4_NATPD3.938e-1428.99Putative thiazole biosynthetic enzyme OS=Natronomo... [more]
THI4_METAC6.717e-1431.18Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_DESOH1.496e-1331.79Putative thiazole biosynthetic enzyme OS=Desulfoco... [more]
THI4_FERNB2.552e-1329.86Putative thiazole biosynthetic enzyme OS=Fervidoba... [more]
THI4_METMA4.354e-1331.18Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_METBF5.686e-1332.14Putative thiazole biosynthetic enzyme OS=Methanosa... [more]
THI4_SULAC1.072e-1128.48Putative thiazole biosynthetic enzyme OS=Sulfolobu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YG19FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270967 ID=DY270967; Name=DY270967; organism=Citrus clementina; type=EST; length=1252bp
CAAATTACTTCTCATTATCAAACTTCTAAGCAGCAGGGGAAGGAGGGGTA
AAAAAAAAAAACATGGCAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGT
TTCGTCTACCACCAATAAGCTCTTTGACTCATCCTTTCATGGGGCTCCCA
TGTCACCTTCTCTTCTACGTCTTCAACCCATCAAATCTTCTCGTCCCAAC
AACTTGTCCATTTCTGCTTCTGCTTCTCCTCCTTATGACTTGAACACTTT
CAAGTTTGACCCCATCAAAGAATCCATTGTTTCTCGTGAAATGACGCGCA
GGTACATGACGGACATGATCACTTATGCTGACACTGATGTGGTAGTGGTT
GGTGCTGGCTCTGCTGGCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCC
CAACATTCAGATTGCTATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCG
CGTGGCTCAGTGGACAGCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCC
CACATCTTCCTTGACGAGCTTGGCATCGACTACGATGAGCAAGACAGCTA
TGTTGTGATCAAGCATGCAGCGCTGTTCACCTCCACTATAATGAGCAAGC
TCCTGGCCCGCCCCAACGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGAC
TTGATAGTCAAAGGCGGCAGAGTTGGTGGTGTGGTGACCAACTGGGCGTT
GGTGTCAATGAATCACAATACACATTCTTGCATGGATCCCAATGGAATGG
AAACCAAGGTGGGTTGTGAGCTCTTGTGGCCATGATGGGCCTTTTGGGGG
CCCTGGAATAAAAAAGGTTAAAAATTAACCGAATGATTGGAGGAAGTGCC
TTGGAATGAAGGGACGGGAAAATGACTCCGCAAAAAAAGCTTTTGGGAAG
GCGAACAGGGGAGGTTTTGCCTGGGTAAAAAATTCCCGCCCGGAAAATTC
CCAAAATTGATGGTGCCTCCAAAAAGGGGGGCAAAAATTTTAAACAAAAT
TAAAAACGGGGCCAAAAAGGGTTCCCCTTTTTGCGATTAGAAATTCACGT
GTCCCCCCCCAAATAGAAAACAAAAGGGACATATACGTTGGTGAACGTGT
TTTCACCTCTAGATACTCAACTATAAGAACCGCCGATCCTAATTTCCCTG
CAAAAGAACACGCTCATATATAGTGTATTAATTTTATAACAAAAAAAAGA
GTCGTCAAAAACAAAACCGCCTACACTCTTCACACCTGTATGCGCGCCTG
GC
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