DY270986
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY270986 vs. ExPASy Swiss-Prot
Match: FADB_SHEAM (Fatty acid oxidation complex subunit alpha OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=fadB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 7.940e-12 Identity = 61/207 (29.47%), Postives = 83/207 (40.10%), Query Frame = 3 Query: 66 APRVTMEVGNDGVAIITLINP-PVNALAIPIVAGLKDKFEEATSRDDVKAIVLTGNGGRFSGGFDINVFQKVHGADCKKPIXXXXXXXXXXXXXXXXM--------------GCHA------RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 623 +P + +E+ D +A + P VN +A L + D KA VLT F G DI F + + K + GC A R+A ++GLPE LG+IPGFGGT RLPRL+G A+E + K E+ K+G IDAVV E L + D A + W Sbjct: 5 SPTIQVELTADKIARLCFNAPGSVNKFDRETLASLNAALD-VLKDSDAKAAVLTSGKDTFIVGADITEFLALFAEEDAKLMEWIAQANVVFNKLEDLPFPTVSAIKGFALGGGCEAILATDFRVADTSAKIGLPETKLGLIPGFGGTVRLPRLIGADNALEWITTGKDQRPEDALKVGAIDAVVAPENLEAAAIQMLNDALAGKLDW 210
BLAST of DY270986 vs. ExPASy Swiss-Prot
Match: FADB_SHEPW (Fatty acid oxidation complex subunit alpha OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=fadB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.769e-11 Identity = 44/119 (36.97%), Postives = 60/119 (50.42%), Query Frame = 3 Query: 369 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNM 725 R+A ++GLPE LG+IPGFGGT RLPR+VG A+E + K E +G IDA+V E+L + D A + W R KL L+ + KL + + TA M Sbjct: 127 RVADTTARIGLPETKLGIIPGFGGTVRLPRVVGTDNALEWITSGKDQRPEAALNVGAIDALVAPEQLQSAALKMLKDAIAEKLDW--QTRRAKKLAPLT----LPKLEAMMSFATAKGM 239
BLAST of DY270986 vs. ExPASy Swiss-Prot
Match: FADB_COLP3 (Fatty acid oxidation complex subunit alpha OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadB PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.769e-11 Identity = 41/101 (40.59%), Postives = 55/101 (54.46%), Query Frame = 3 Query: 354 MGCHARIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEEL-------LKVSRLWALDIAARRKPWIRSL 635 + C R+AA +GLPE+ LG++PGFGGT RLPRL+G A M K+ G IDAVV E L LK++ LD A+R+P + +L Sbjct: 122 LACDYRVAATTASIGLPEVKLGLMPGFGGTVRLPRLIGFDNAATWMSTGKAFKPAAALAQGAIDAVVEPENLQAAAISMLKLAIDGKLDWRAKRQPKLEAL 222
BLAST of DY270986 vs. ExPASy Swiss-Prot
Match: FADB_SHEPA (Fatty acid oxidation complex subunit alpha OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=fadB PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.940e-11 Identity = 36/85 (42.35%), Postives = 47/85 (55.29%), Query Frame = 3 Query: 369 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVVTSEELLKVSRLWALDIAARRKPW 623 RIA ++GLPE LG+IPGFGGT RLPR++G A+E + K E K+G IDAVV E+L + D + W Sbjct: 127 RIADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITSGKDQRPEAALKVGAIDAVVAPEQLKPAALKMLKDALIEKLDW 211
BLAST of DY270986 vs. ExPASy Swiss-Prot
Match: FADB_PSEMY (Fatty acid oxidation complex subunit alpha OS=Pseudomonas mendocina (strain ymp) GN=fadB PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.146e-11 Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 3 Query: 369 RIAAPKTQLGLPELTLGVIPGFGGTQRLPRLVGLSKAIEMMLLSKSITSEEGWKLGLIDAVV-------TSEELLKVSRLWALDIAARRKPWIRSLHRTDKLGSLSEAREVLKLARLQAKKTAPNMPHHKHGLNVIEE 761 R+ + ++GLPE+ LG+ PGFGGT RLPR++G A+E + K + + K+G +DAVV + +L+K + LD A+R+P + L KL ++ + A + PN P + I++ Sbjct: 128 RVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAVEWIASGKENKAADALKVGAVDAVVAPAKLKEAALDLVKRAISGELDYKAKRQPKLEKL----KLNAIEQMMCFETAKGFVAGQAGPNYPAPVEAIKTIQK 261 The following BLAST results are available for this feature:
BLAST of DY270986 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 215
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Sequences
The
following sequences are available for this feature:
EST sequence >DY270986 ID=DY270986; Name=DY270986; organism=Citrus clementina; type=EST; length=1215bpback to top |