DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_GRATL (Chaperone protein dnaK OS=Gracilaria tenuistipitata var. liui GN=dnaK PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.607e-16
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS +A MEGGKPT++ N EG RTTPSVVA TK +DKLV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGKPTVIPNKEGLRTTPSVVAYTKKQDKLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_THEEB (Chaperone protein dnaK2 OS=Thermosynechococcus elongatus (strain BP-1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.099e-16
Identity = 45/61 (73.77%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA TK  D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAYTKNGDRLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNP6 (Chaperone protein dnaK 2 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 2.741e-16
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA  K +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNQDRLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_SYNE7 (Chaperone protein dnaK2 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK2 PE=3 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 2.741e-16
Identity = 44/61 (72.13%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA  K +D+LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNQDRLVGQIAKRQAVMNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PORYE (Chaperone protein dnaK OS=Porphyra yezoensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.107e-16
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS +A MEGGKPT++ NAEG RTT SVVA TK  DKLV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGKPTVIPNAEGFRTTASVVAYTKSGDKLVGQIARRQAVINPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PORHA (Chaperone protein dnaK OS=Porphyra haitanensis GN=dnaK PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.107e-16
Identity = 44/61 (72.13%), Postives = 49/61 (80.33%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS +A MEGGKPT++ NAEG RTT SVVA TK  DKLV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSVIAVMEGGKPTVIPNAEGFRTTASVVAYTKSGDKLVGQIARRQAVINPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_GLOVI (Chaperone protein dnaK OS=Gloeobacter violaceus GN=dnaK PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 6.107e-16
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA TK  D+LV Q+A R AV+N +
Sbjct:    3 KVVGIDLGTTNSVVAVLEGGQPTVIANAEGSRTTPSVVAFTKNHDRLVGQLARRQAVLNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_THAPS (Chaperone protein dnaK OS=Thalassiosira pseudonana GN=dnaK PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.042e-15
Identity = 42/61 (68.85%), Postives = 52/61 (85.25%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VAA+EGG+PT++TNAEG RTTPS+VA TK ++ LV Q+A R +VVN +
Sbjct:    3 KVVGIDLGTTNSVVAAIEGGQPTVITNAEGFRTTPSIVAYTKKQELLVGQLAKRQSVVNAE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PHATR (Chaperone protein dnaK OS=Phaeodactylum tricornutum GN=dnaK PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.777e-15
Identity = 42/61 (68.85%), Postives = 51/61 (83.61%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VAA+EGG+P+++ NAEG RTTPS+VA TK E+ LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSVVAAIEGGQPSVIINAEGLRTTPSIVAYTKKEELLVGQIAKRQAVINPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK2_ANASP (Chaperone protein dnaK2 OS=Anabaena sp. (strain PCC 7120) GN=dnaK2 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.777e-15
Identity = 44/61 (72.13%), Postives = 48/61 (78.69%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KVVGIDLGTTNS VA MEGGKPT++ NAEG RTTPSVVA  K  D LV QIA R AV+N +
Sbjct:    3 KVVGIDLGTTNSCVAVMEGGKPTVIANAEGFRTTPSVVAFAKNGDTLVGQIAKRQAVMNPE 63          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_GRATL1.607e-1672.13Chaperone protein dnaK OS=Gracilaria tenuistipitat... [more]
DNAK2_THEEB2.099e-1673.77Chaperone protein dnaK2 OS=Thermosynechococcus elo... [more]
DNAK2_SYNP62.741e-1672.13Chaperone protein dnaK 2 OS=Synechococcus sp. (str... [more]
DNAK2_SYNE72.741e-1672.13Chaperone protein dnaK2 OS=Synechococcus elongatus... [more]
DNAK_PORYE6.107e-1672.13Chaperone protein dnaK OS=Porphyra yezoensis GN=dn... [more]
DNAK_PORHA6.107e-1672.13Chaperone protein dnaK OS=Porphyra haitanensis GN=... [more]
DNAK_GLOVI6.107e-1668.85Chaperone protein dnaK OS=Gloeobacter violaceus GN... [more]
DNAK_THAPS1.042e-1568.85Chaperone protein dnaK OS=Thalassiosira pseudonana... [more]
DNAK_PHATR1.777e-1568.85Chaperone protein dnaK OS=Phaeodactylum tricornutu... [more]
DNAK2_ANASP1.777e-1572.13Chaperone protein dnaK2 OS=Anabaena sp. (strain PC... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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