DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_THEP3 (Chaperone protein dnaK OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=dnaK PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 1.152e-14
Identity = 40/62 (64.52%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            KV+GIDLGTT S VA MEGG+P ++ NAEG RTTPSVVA TK  ++LV Q+A R A+VN D+
Sbjct:    3 KVIGIDLGTTFSCVAVMEGGQPVVIPNAEGARTTPSVVAFTKEGERLVGQVAKRQAIVNPDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_EUBE2 (Chaperone protein dnaK OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=dnaK PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.504e-14
Identity = 40/62 (64.52%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGGKP ++ NAEG RTTPSVVA +K  ++LV   A R AV N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGKPVVIANAEGLRTTPSVVAFSKTGERLVGDPAKRQAVTNADK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_DESRM (Chaperone protein dnaK OS=Desulfotomaculum reducens (strain MI-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.351e-14
Identity = 41/74 (55.41%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDKNPQPNNRIKDNN 519
            KV+GIDLGTTNS VA MEGG+  ++ NAEG RTTPSVV  +K  ++LV Q+A R AV N D+  Q   R    N
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEAVVIPNAEGARTTPSVVGFSKTGERLVGQVAKRQAVSNPDRTIQSIKRYMGTN 76          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_DESHD (Chaperone protein dnaK OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=dnaK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.351e-14
Identity = 39/62 (62.90%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            KV+GIDLGTTNS VA MEGG+  ++TNAEG RTTPSVV  +K  ++L  Q+A R AV N DK
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEAVVITNAEGNRTTPSVVGFSKTGERLAGQVAKRQAVSNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BDEBA (Chaperone protein dnaK OS=Bdellovibrio bacteriovorus GN=dnaK PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 3.351e-14
Identity = 40/61 (65.57%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVVA TK  D+LV QIA R AV N +
Sbjct:    3 KIIGIDLGTTNSCVAIMEGGEPKVLVNEEGARTTPSVVAYTKDGDRLVGQIAKRQAVTNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_HALOH (Chaperone protein dnaK OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=dnaK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.377e-14
Identity = 37/62 (59.68%), Postives = 49/62 (79.03%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA TK  +++V + A R A+ N D+
Sbjct:    3 KIIGIDLGTTNSCVAVLEGGEPTVIPNAEGNRTTPSVVAYTKKGERIVGEPAKRQAITNPDQ 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOPE (Chaperone protein dnaK OS=Clostridium perfringens GN=dnaK PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 4.377e-14
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+P ++TN+EG RTTPSVV+     ++LV Q+A R A+ N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPVVITNSEGARTTPSVVSFQANGERLVGQVAKRQAITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOP1 (Chaperone protein dnaK OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.377e-14
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+P ++TN+EG RTTPSVV+     ++LV Q+A R A+ N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPVVITNSEGARTTPSVVSFQANGERLVGQVAKRQAITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOB8 (Chaperone protein dnaK OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=dnaK PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 4.377e-14
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            K++GIDLGTTNS VA MEGG+PT++ N+EG RTTPSVV+     ++LV Q+A R A+ N DK
Sbjct:    3 KIIGIDLGTTNSCVAVMEGGEPTVIANSEGARTTPSVVSFQANGERLVGQVAKRQAITNPDK 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: HSP7M_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=AN6010 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 5.716e-14
Identity = 56/123 (45.53%), Postives = 69/123 (56.10%), Query Frame = 1
Query:  112 LSSRRIKAASFQSSAPRTAFFGQALGRKPHFGLPNAAFLKLNNEKNNTRRRCNVGPVRVVNEKVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            LSSR  +A       PRTA F +A    P F LP+ A  + N+ +              V  +V+GIDLGTTNSAVA MEG  P I+ NAEG RTTPSVVA  +  ++LV   A R AVVN +
Sbjct:    2 LSSRLSRAL------PRTAPFARA----PAFRLPSTAARRWNSTEEK------------VKGQVIGIDLGTTNSAVAVMEGKTPKIIENAEGARTTPSVVAFAQDGERLVGIAAKRQAVVNPE 102          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_THEP31.152e-1464.52Chaperone protein dnaK OS=Thermoanaerobacter pseud... [more]
DNAK_EUBE21.504e-1464.52Chaperone protein dnaK OS=Eubacterium eligens (str... [more]
DNAK_DESRM3.351e-1455.41Chaperone protein dnaK OS=Desulfotomaculum reducen... [more]
DNAK_DESHD3.351e-1462.90Chaperone protein dnaK OS=Desulfitobacterium hafni... [more]
DNAK_BDEBA3.351e-1465.57Chaperone protein dnaK OS=Bdellovibrio bacteriovor... [more]
DNAK_HALOH4.377e-1459.68Chaperone protein dnaK OS=Halothermothrix orenii (... [more]
DNAK_CLOPE4.377e-1459.68Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_CLOP14.377e-1459.68Chaperone protein dnaK OS=Clostridium perfringens ... [more]
DNAK_CLOB84.377e-1459.68Chaperone protein dnaK OS=Clostridium beijerinckii... [more]
HSP7M_EMENI5.716e-1445.53Heat shock 70 kDa protein OS=Emericella nidulans G... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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