DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_ECO24 (Chaperone protein dnaK OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.726e-11
Identity = 34/59 (57.63%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G  P ++ NAEG RTTPS++A T+  + LV Q A R AV N
Sbjct:    3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTN 61
[Close]
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CAUSK (Chaperone protein dnaK OS=Caulobacter sp. (strain K31) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.726e-11
Identity = 35/59 (59.32%), Postives = 43/59 (72.88%), Query Frame = 1 
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G  P ++ NAEG RTTPSVVA  +  ++LV Q A R AV N
Sbjct:    3 KIIGIDLGTTNSCVAIMDGKTPKVIENAEGARTTPSVVAFLEDGERLVGQPAKRQAVTN 61
[Close]
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BACP2 (Chaperone protein dnaK OS=Bacillus pumilus (strain SAFR-032) GN=dnaK PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 7.726e-11
Identity = 33/59 (55.93%), Postives = 45/59 (76.27%), Query Frame = 1 
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA +EGG+P ++ NAEG RTTPSVVA  K  ++ V ++A R ++ N
Sbjct:    3 KIIGIDLGTTNSCVAVLEGGEPKVIANAEGARTTPSVVA-FKNGERQVGEVAKRQSITN 60
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_ECO247.726e-1157.63Chaperone protein dnaK OS=Escherichia coli O139:H2... [more]
DNAK_CAUSK7.726e-1159.32Chaperone protein dnaK OS=Caulobacter sp. (strain ... [more]
DNAK_BACP27.726e-1155.93Chaperone protein dnaK OS=Bacillus pumilus (strain... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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