DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_METBU (Chaperone protein dnaK OS=Methanococcoides burtonii (strain DSM 6242) GN=dnaK PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/59 (62.71%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS +A +EGGKPT++ NAEG RTTPSVV  +K  DKLV Q+A R  + N
Sbjct:    3 KILGIDLGTTNSCMAVIEGGKPTVIPNAEGGRTTPSVVGFSKKGDKLVGQVAKRQMIAN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_DESAH (Chaperone protein dnaK OS=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/61 (60.66%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            K++GIDLGTTNS VA ME G+P ++TN+EG RTTPSVVA T+  D+LV Q A R A+ N +
Sbjct:    3 KIIGIDLGTTNSCVAVMEAGEPKVITNSEGNRTTPSVVALTEGGDRLVGQTAKRQAITNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLO (Chaperone protein dnaK OS=Bifidobacterium longum GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS +A +EGG+PT++ NAEG RTTPSVVA +K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLI (Chaperone protein dnaK OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS +A +EGG+PT++ NAEG RTTPSVVA +K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BIFLD (Chaperone protein dnaK OS=Bifidobacterium longum (strain DJO10A) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS +A +EGG+PT++ NAEG RTTPSVVA +K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BIFAA (Chaperone protein dnaK OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS +A +EGG+PT++ NAEG RTTPSVVA +K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSCIATLEGGQPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_BIFA0 (Chaperone protein dnaK OS=Bifidobacterium animalis subsp. lactis (strain AD011) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS +A +EGG+PT++ NAEG RTTPSVVA +K  + LV ++A R AV N D+
Sbjct:    3 RAVGIDLGTTNSCIATLEGGEPTVIVNAEGARTTPSVVAFSKSGEILVGEVAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_ANAVT (Chaperone protein dnaK OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVV  +K  +++V Q+A R  V+N
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFSKDGERVVGQMARRQTVLN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK1_ANASP (Chaperone protein dnaK1 OS=Anabaena sp. (strain PCC 7120) GN=dnaK1 PE=2 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 1.663e-13
Identity = 38/59 (64.41%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            KVVGIDLGTTNS VA MEGGKP ++ NAEG RTTPSVV  +K  +++V Q+A R  V+N
Sbjct:    3 KVVGIDLGTTNSVVAVMEGGKPVVIANAEGMRTTPSVVGFSKDGERVVGQMARRQTVLN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PROAC (Chaperone protein dnaK OS=Propionibacterium acnes GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 1
Query:  304 VGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            VGIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA T   + LV ++A R AV N D+
Sbjct:    5 VGIDLGTTNSCVAVLEGGEPTVIPNAEGARTTPSVVAFTNSGETLVGEVAKRQAVTNVDR 64          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_METBU1.663e-1362.71Chaperone protein dnaK OS=Methanococcoides burtoni... [more]
DNAK_DESAH1.663e-1360.66Chaperone protein dnaK OS=Desulfobacterium autotro... [more]
DNAK_BIFLO1.663e-1359.68Chaperone protein dnaK OS=Bifidobacterium longum G... [more]
DNAK_BIFLI1.663e-1359.68Chaperone protein dnaK OS=Bifidobacterium longum s... [more]
DNAK_BIFLD1.663e-1359.68Chaperone protein dnaK OS=Bifidobacterium longum (... [more]
DNAK_BIFAA1.663e-1359.68Chaperone protein dnaK OS=Bifidobacterium adolesce... [more]
DNAK_BIFA01.663e-1359.68Chaperone protein dnaK OS=Bifidobacterium animalis... [more]
DNAK_ANAVT1.663e-1364.41Chaperone protein dnaK OS=Anabaena variabilis (str... [more]
DNAK1_ANASP1.663e-1364.41Chaperone protein dnaK1 OS=Anabaena sp. (strain PC... [more]
DNAK_PROAC2.172e-1363.33Chaperone protein dnaK OS=Propionibacterium acnes ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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