DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PELCD (Chaperone protein dnaK OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS VA MEGG+P ++ NAEG RTTPS+VA T+  ++LV Q A R AV N +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPVVIANAEGSRTTPSMVAFTENGERLVGQQAKRQAVTNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CLOCE (Chaperone protein dnaK OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 35/62 (56.45%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            KV+GIDLGTTNS VA MEGG+P ++ N EG RTTPSVVA +K  +++  Q+A R A+ N ++
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPIVIANPEGNRTTPSVVAFSKTGERMTGQVAKRQAITNPER 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CHLCH (Chaperone protein dnaK OS=Chlorobium chlorochromatii (strain CaD3) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 36/59 (61.02%), Postives = 45/59 (76.27%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPSVV  TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVAVMQGSQPTVIENSEGNRTTPSVVGFTKTGDRLVGQAAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_ACIC5 (Chaperone protein dnaK OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVV  TK  ++LV Q+A R A+ N +
Sbjct:    3 KIIGIDLGTTNSVVAVMEGGEPKVIANEEGGRTTPSVVGFTKSGERLVGQVAKRQAITNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_ACIBL (Chaperone protein dnaK OS=Acidobacteria bacterium (strain Ellin345) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            K++GIDLGTTNS VA MEGG+P ++ N EG RTTPSVV  TK  ++LV Q+A R A+ N +
Sbjct:    3 KIIGIDLGTTNSVVAVMEGGEPKVIPNEEGGRTTPSVVGFTKTGERLVGQVAKRQAITNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK3_SYNP6 (Chaperone protein dnaK 3 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=dnaK3 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS VA +EGGKP IVTN EG RTTPS+VA  +  D++V ++A R AV N +
Sbjct:    3 KVIGIDLGTTNSCVAVLEGGKPIIVTNREGDRTTPSIVAVGRKGDRIVGRMAKRQAVTNAE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK1_SYNE7 (Chaperone protein dnaK1 OS=Synechococcus elongatus (strain PCC 7942) GN=dnaK1 PE=3 SV=2)

HSP 1 Score: 77.411 bits (189), Expect = 2.172e-13
Identity = 38/61 (62.30%), Postives = 47/61 (77.05%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS VA +EGGKP IVTN EG RTTPS+VA  +  D++V ++A R AV N +
Sbjct:    3 KVIGIDLGTTNSCVAVLEGGKPIIVTNREGDRTTPSIVAVGRKGDRIVGRMAKRQAVTNAE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_SYNAS (Chaperone protein dnaK OS=Syntrophus aciditrophicus (strain SB) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.837e-13
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            +++GIDLGTTNS VA MEGG P ++ N EG RTTPS+VA T+  ++LV Q+A R AV N +
Sbjct:    3 RIIGIDLGTTNSCVAVMEGGDPVVIANQEGNRTTPSIVAFTESGERLVGQVAKRQAVTNSE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PELPB (Chaperone protein dnaK OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.837e-13
Identity = 34/59 (57.63%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS V+ M+G +PT++ N+EG RTTPS++A TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVSVMQGSQPTVIENSEGNRTTPSIIALTKTGDRLVGQAAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PELLD (Chaperone protein dnaK OS=Pelodictyon luteolum (strain DSM 273) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.837e-13
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKTGDRLVGQAAKRQAITN 61          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_PELCD2.172e-1362.30Chaperone protein dnaK OS=Pelobacter carbinolicus ... [more]
DNAK_CLOCE2.172e-1356.45Chaperone protein dnaK OS=Clostridium cellulolytic... [more]
DNAK_CHLCH2.172e-1361.02Chaperone protein dnaK OS=Chlorobium chlorochromat... [more]
DNAK_ACIC52.172e-1359.02Chaperone protein dnaK OS=Acidobacterium capsulatu... [more]
DNAK_ACIBL2.172e-1359.02Chaperone protein dnaK OS=Acidobacteria bacterium ... [more]
DNAK3_SYNP62.172e-1362.30Chaperone protein dnaK 3 OS=Synechococcus sp. (str... [more]
DNAK1_SYNE72.172e-1362.30Chaperone protein dnaK1 OS=Synechococcus elongatus... [more]
DNAK_SYNAS2.837e-1357.38Chaperone protein dnaK OS=Syntrophus aciditrophicu... [more]
DNAK_PELPB2.837e-1357.63Chaperone protein dnaK OS=Pelodictyon phaeoclathra... [more]
DNAK_PELLD2.837e-1361.02Chaperone protein dnaK OS=Pelodictyon luteolum (st... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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