DY270999

Overview
NameDY270999
Unique NameDY270999
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1348
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CHLL2 (Chaperone protein dnaK OS=Chlorobium limicola (strain DSM 245 / NBRC 103803) GN=dnaK PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.837e-13
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAVTKTGDRLVGQAAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_THEFY (Chaperone protein dnaK OS=Thermobifida fusca (strain YX) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.705e-13
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS VA +EGG+PT++ NAEG RTTPSVVA  K  + LV +IA R AV N ++
Sbjct:    3 RAVGIDLGTTNSVVAVLEGGEPTVIANAEGARTTPSVVAFAKNGEVLVGEIAKRQAVTNVER 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_NOVAD (Chaperone protein dnaK OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.705e-13
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS VA M+GG P ++ N+EG RTTPS+VA TK  ++L+ Q A R AV N D
Sbjct:    3 KVIGIDLGTTNSCVAVMDGGTPKVIENSEGARTTPSIVAFTKDGERLIGQPAKRQAVTNPD 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_CHLPD (Chaperone protein dnaK OS=Chlorobium phaeobacteroides (strain DSM 266) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 3.705e-13
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKSGDRLVGQAAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_PROVI (Chaperone protein dnaK OS=Prosthecochloris vibrioformis (strain DSM 265) (strain DSM 265) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 36/59 (61.02%), Postives = 46/59 (77.97%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA M+G +PT++ N+EG RTTPS+VA TK  D+LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVAVMQGTQPTVIENSEGNRTTPSMVAFTKNGDRLVGQAAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_NITOC (Chaperone protein dnaK OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 38/59 (64.41%), Postives = 44/59 (74.58%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVN 474
            K++GIDLGTTNS VA MEG KP ++ NAEG RTTPSVVA TK  + LV Q A R A+ N
Sbjct:    3 KIIGIDLGTTNSCVALMEGNKPRVIENAEGDRTTPSVVAFTKEGETLVGQSAKRQAITN 61          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_MYXXD (Chaperone protein dnaK OS=Myxococcus xanthus (strain DK 1622) GN=dnaK PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 36/61 (59.02%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            KV+GIDLGTTNS VA MEGG+P ++ N+EG RTTPS+V  T   ++LV QIA R A+ N +
Sbjct:    3 KVIGIDLGTTNSCVAVMEGGEPVVIPNSEGSRTTPSMVGFTDSGERLVGQIAKRQAITNPE 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_METMA (Chaperone protein dnaK OS=Methanosarcina mazei GN=dnaK PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 37/61 (60.66%), Postives = 46/61 (75.41%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQD 480
            K++GIDLGTTNS VA MEGG+  ++ NAEG RTTPSVV  +K  +KLV Q+A R A+ N D
Sbjct:    3 KILGIDLGTTNSCVAVMEGGEAVVIPNAEGSRTTPSVVGFSKKGEKLVGQVAKRQAISNPD 63          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_LEIXX (Chaperone protein dnaK OS=Leifsonia xyli subsp. xyli GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 38/62 (61.29%), Postives = 47/62 (75.81%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS V+ +EGG+PT++ NAEG RTTPSVVA TK  + LV + A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVSVLEGGEPTVIANAEGFRTTPSVVAFTKDGEVLVGETAKRQAVTNVDR 64          
BLAST of DY270999 vs. ExPASy Swiss-Prot
Match: DNAK_KOCRD (Chaperone protein dnaK OS=Kocuria rhizophila (strain ATCC 9341 / DSM 348 / NBRC 103217 / DC2201) GN=dnaK PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 4.839e-13
Identity = 37/62 (59.68%), Postives = 46/62 (74.19%), Query Frame = 1
Query:  298 KVVGIDLGTTNSAVAAMEGGKPTIVTNAEGQRTTPSVVA*TKIEDKLVAQIAYRLAVVNQDK 483
            + VGIDLGTTNS VA +EGG+P ++ NAEG RTTPSVVA +K  + LV  +A R AV N D+
Sbjct:    3 RAVGIDLGTTNSVVAVLEGGEPVVIANAEGNRTTPSVVAFSKDGETLVGDVAKRQAVTNVDR 64          
The following BLAST results are available for this feature:
BLAST of DY270999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 373
Match NameE-valueIdentityDescription
DNAK_CHLL22.837e-1361.02Chaperone protein dnaK OS=Chlorobium limicola (str... [more]
DNAK_THEFY3.705e-1361.29Chaperone protein dnaK OS=Thermobifida fusca (stra... [more]
DNAK_NOVAD3.705e-1360.66Chaperone protein dnaK OS=Novosphingobium aromatic... [more]
DNAK_CHLPD3.705e-1361.02Chaperone protein dnaK OS=Chlorobium phaeobacteroi... [more]
DNAK_PROVI4.839e-1361.02Chaperone protein dnaK OS=Prosthecochloris vibriof... [more]
DNAK_NITOC4.839e-1364.41Chaperone protein dnaK OS=Nitrosococcus oceani (st... [more]
DNAK_MYXXD4.839e-1359.02Chaperone protein dnaK OS=Myxococcus xanthus (stra... [more]
DNAK_METMA4.839e-1360.66Chaperone protein dnaK OS=Methanosarcina mazei GN=... [more]
DNAK_LEIXX4.839e-1361.29Chaperone protein dnaK OS=Leifsonia xyli subsp. xy... [more]
DNAK_KOCRD4.839e-1359.68Chaperone protein dnaK OS=Kocuria rhizophila (stra... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YI09FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY270999 ID=DY270999; Name=DY270999; organism=Citrus clementina; type=EST; length=1348bp
TACAAACCCTTATCTTCTCCACCAAAAGAAAGTCAACATTTTCACAGACC
CACAATCACAAACATGGCGACGTTTTCAACAACCCAAATTCACTCTCTGG
GTAACATTCCTTTGTCTTCAAGAAGGATTAAAGCCGCTAGTTTTCAATCA
TCCGCTCCGAGAACCGCCTTTTTCGGCCAAGCACTGGGCAGAAAACCGCA
TTTTGGCCTCCCAAACGCGGCTTTTTTGAAGTTAAACAATGAAAAAAACA
ATACTAGAAGAAGGTGTAACGTGGGTCCGGTGAGAGTGGTGAATGAGAAG
GTGGTGGGGATTGATTTGGGGACGACGAATTCGGCGGTGGCGGCGATGGA
AGGGGGGAAGCCGACGATAGTGACGAATGCCGAGGGGCAACGGACGACGC
CGTCTGTGGTTGCATAAACCAAGATTGAGGATAAGTTGGTGGCTCAAATT
GCCTACAGACTTGCAGTTGTGAACCAGGACAAAAACCCACAACCAAACAA
CAGAATCAAAGACAACAACCAACTCAATATGTAATAACCCATCTACAAGT
AATGAAAAGAGGAAGATGTTAAAACAGGATAACATTACACACATACATGA
AAACCGGAGCGACACAGCAACAACACACGAAAAGAGAATAAACTTCTAAA
AATAAAATAACAAATAATAAAAAACAAAATATCAACATCACTAAAAACAT
AACAAGAAAACATACCCACCAACATCAACACTTAAAACGCAAGTCAAAAA
ATAAAACCAGCATTCATTACACATCTTAACCGAACGATCCCAAGCACCCA
AAATCACCCATACCCTAAACTATATCCAAAATAAATTTACCAGAAAAGTC
ATGACACACCCAGCAAATACGAAAATCATAGTAAGCTATCTAAAACCACA
CCCCCCCAATATAGAAAAACTCACCTACCAGATTAACTACCATACCAAAA
ACGATACCTTCCTAACCCTTTTAAATACACAAACCACAAGAATCCCCTCT
ACAACACACCATGAGACTCTCAACAAAAACACAAGCCTCTATAACTAAGC
ATAAAACCCTAAAAACAACAAAGAGTATACCATCATCTATTATACAAACA
ATATATATAACAACAAATAATATGAAATATAAATAAATCTACAAACTCTA
AAAAATTGTTCACAACGACAGAATAATTTCAATACTACCACAGATCTATC
ATCAACCACCTTTATCAAAACTAGATCCAGCCTACCGAGACATATGCTCT
CTCAATCACTCTACACAAGCAAGACGATACATATGGAAGCAATACACAGT
CGAAAAGACGGCTTACATATCAAAATCGAGAAGACAACCAGCTATACT
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