DY271058

Overview
NameDY271058
Unique NameDY271058
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length1230
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PAG2_BOVIN (Pregnancy-associated glycoprotein 2 OS=Bos taurus GN=PAG2 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 5.200e-35
Identity = 88/253 (34.78%), Postives = 130/253 (51.38%), Query Frame = 2
Query:  155 LNAARITRKERYMGGAGVSGVHHRLGDSDEDIL--PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFGRGG--CACICG 901
            +   R T +E+ +    +    +RL  +D  I   PL+N++D  Y G I IG+PPQ F V+FDTGS+NLWVP   C  S +CY H  +  + S+++ E+G    I YGSG I GF                 F  +  E     L   FDGI+GL F  + + D +P++DN+   G  SE VF+F+LN   +  EG  ++FGGVD + +KG+  ++PV++            +W+IS       G   AC CG
Sbjct:   24 MKTLRETLREKNLLNNFLEEQAYRLSKNDSKITIHPLRNYLDTAYVGNITIGTPPQEFRVVFDTGSANLWVPCITC-TSPACYTHKTFNPQNSSSFREVGSPITIFYGSGIIQGFLGSDTVRIGNLVSPEQSFGLSLEEYGFDSL--PFDGILGLAFPAMGIEDTIPIFDNLWSHGAFSEPVFAFYLN--TNKPEGSVVMFGGVDHRYYKGELNWIPVSQTS----------HWQISMNNISMNGTVTACSCG 261          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CHYM_CALJA (Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.513e-34
Identity = 74/190 (38.95%), Postives = 116/190 (61.05%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQF 826
            L N++D QYFG+I IG+PPQ F+V+FDTGSS+LWVPS  C  S++C  H R+   KS+T+  + KS  I YG+GS+ G                     +T+E    F  + FDGI+GL +  +A   +VPV+DNM+++ LV++++FS +++R+   E+G  +  G +DP  + G   ++PVT + + QF
Sbjct:   66 LTNYLDCQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSVYCN-SVACQNHHRFDPSKSSTFQNMDKSLSIQYGTGSMQGLLGYDTVTVSSIVDPHQTVGLSTQEPGDVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVAQDLFSVYMSRN---EQGSMLTLGAIDPSYYTGSLHWIPVTVQEYWQF 251          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPB_CANFA (Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.976e-34
Identity = 71/190 (37.37%), Postives = 113/190 (59.47%), Query Frame = 2
Query:  254 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            P  N++D+ YFGEI IG+PPQNF ++FDTGSSNLWVPS+ C  S +C  H+R+   +S+TY    ++  + YG GS++                   F  +  E +  F  + FDGI+G+ +  +AV +   V  NM++QG +++ +FSF+ +  P  E GGE++ GGVD + + G+  + PVT++ + Q
Sbjct:   65 PFTNYLDSYYFGEISIGTPPQNFLILFDTGSSNLWVPSTYCQ-SQACSNHNRFNPSRSSTYQSSEQTYTLAYGFGSLTVLLGYDTVTVQNIVIHNQLFGMSENEPNYPFYYSYFDGILGMAYSNLAVDNGPTVLQNMMQQGQLTQPIFSFYFSPQPTYEYGGELILGGVDTQFYSGEIVWAPVTREMYWQ 253          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.976e-34
Identity = 84/235 (35.74%), Postives = 128/235 (54.47%), Query Frame = 2
Query:  254 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGK-NINWEISPQVFGRGGCACICGPQEHSLQPRSNPRLDLKS 955
            PL N+MD +YFG I IG+PPQ F+VIFDTGSSNLWVPS  C  S +C  H+R+  +KS+T+    ++  I YG+GS++G                  F  +  E       + FDGI+GL +  I+   A PV+DNM  QGLVS+++FS +L+ +   + G  ++FGG+D   + G   +VP++ +G+ Q       +N +    +   GGC  I       L   +N   +++S
Sbjct:   66 PLVNYMDMEYFGTISIGTPPQEFTVIFDTGSSNLWVPSIYC-SSPACSNHNRFDPQKSSTFKPTSQTVSIAYGTGSMTGVLGYDTVQVAGIADTNQIFGLSQSEPGSFLYYSPFDGILGLAYPSISSSGATPVFDNMWNQGLVSQDLFSVYLSSND--QSGSVVMFGGIDSSYYTGSLNWVPLSSEGYWQITVDSITMNGQ---SIACNGGCQAIVDTGTSLLSGPTNAIANIQS 294          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPA_PIG (Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3)

HSP 1 Score: 147.132 bits (370), Expect = 1.976e-34
Identity = 76/191 (39.79%), Postives = 117/191 (61.26%), Query Frame = 2
Query:  254 PLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXF-IEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            PL+N++D +YFG IGIG+P Q+F+VIFDTGSSNLWVPS  C  S++C  H+++    S+T+    +   I YG+GS++G                  F +  T  GS  +  A FDGI+GL +  I+   A PV+DN+ +QGLVS+++FS +L+ + D+  G  ++ GG+D   + G   +VPV+ +G+ Q
Sbjct:   64 PLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYC-SSLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLY-YAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDS--GSVVLLGGIDSSYYTGSLNWVPVSVEGYWQ 250          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPA_CHICK (Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1)

HSP 1 Score: 147.132 bits (370), Expect = 1.976e-34
Identity = 80/207 (38.65%), Postives = 116/207 (56.04%), Query Frame = 2
Query:  218 HHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGK 838
            +H +  + E   P+ N+MDA Y+G I IG+P Q+FSVIFDTGSSNLWVPS  C  S +C  H R+   KS+TY    ++  I YG+GS+SG                  F  +  E    F    FDGI+GL F  I+   A PV+DNM+ Q LV++++FS +L++  D E G  ++FGG+DP        +VP++ + + Q    +
Sbjct:   38 YHPVLTATESYEPMTNYMDASYYGTISIGTPQQDFSVIFDTGSSNLWVPSIYCK-SSACSNHKRFDPSKSSTYVSTNETVYIAYGTGSMSGILGYDTVAVSSIDVQNQIFGLSETEPGSFFYYCNFDGILGLAFPSISSSGATPVFDNMMSQHLVAQDLFSVYLSK--DGETGSFVLFGGIDPNYTTKGIYWVPLSAETYWQITMDR 241          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.581e-34
Identity = 77/186 (41.40%), Postives = 110/186 (59.14%), Query Frame = 2
Query:  266 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            +MDA YFGEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+R+   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L        GG+IVFGGVD   + G+ T+VPVT++ + Q
Sbjct:   71 YMDASYFGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHARFNPSKSSTYYTEGQTFSLQYGTGSLTGFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDKNLYTGEITWVPVTQELYWQ 254          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.581e-34
Identity = 76/186 (40.86%), Postives = 110/186 (59.14%), Query Frame = 2
Query:  266 FMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            +MDA Y+GEI IG+PPQNF V+FDTGSSNLWV S  C  S +C  H+RY   KS+TY   G++  + YG+GS++GFF                F  +  E    F+ A+FDGI+GL +  ++ G A      M+ +G +S+ +F  +L        GG+IVFGGVD   + G+ T++PVT++ + Q
Sbjct:   71 YMDASYYGEISIGTPPQNFLVLFDTGSSNLWVSSVYCQ-SEACTTHTRYNPSKSSTYYTQGQTFSLQYGTGSLTGFFGYDTLRVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPGLSSGGATTALQGMLGEGALSQPLFGVYLG-SQQGSNGGQIVFGGVDENLYTGELTWIPVTQELYWQ 254          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 2.581e-34
Identity = 77/189 (40.74%), Postives = 111/189 (58.73%), Query Frame = 2
Query:  257 LKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQ 823
            +KN  D +Y+G I IG+PP++F VIFDTGSSNLWV SS C  + +C  H+++K R+S+TY E GK+ ++ YG+G + G   Q                E+  E       A FDGI+GL +  IA   AVPV+DNM  Q LV +++FSF+L+       G E++ GGVD   + G   ++PVT + + Q
Sbjct:    6 MKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHC-SAQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMRGILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLS--GGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQ 191          
BLAST of DY271058 vs. ExPASy Swiss-Prot
Match: CHYM_BOVIN (Chymosin OS=Bos taurus GN=CYM PE=1 SV=3)

HSP 1 Score: 145.206 bits (365), Expect = 7.509e-34
Identity = 99/305 (32.46%), Postives = 158/305 (51.80%), Query Frame = 2
Query:  176 RKERYMGGAGVSGVHHRLGDSDEDILPLKNFMDAQYFGEIGIGSPPQNFSVIFDTGSSNLWVPSSKCYFSISCYFHSRYKSRKSNTYTEIGKSCEINYGSGSISGFFSQXXXXXXXXXXXXXXFIEATREGSLTFLLARFDGIIGLGFREIAVGDAVPVWDNMVEQGLVSEEVFSFWLNRDPDAEEGGEIVFGGVDPKPFKGKHTYVPVTKKGFCQFNFGKNINWEISPQVFG-RGGCACICGPQEHSLQPRSNPRLDLKSIPAIG-----WGREFFSGGSENYF----FSPYGGIYLRKPSYYT 1060
            +K++Y    G+S  +   G+     +PL N++D+QYFG+I +G+PPQ F+V+FDTGSS+ WVPS  C  S +C  H R+  RKS+T+  +GK   I+YG+GS+ G                     +T+E    F  A FDGI+G+ +  +A   ++PV+DNM+ + LV++++FS +++R+    +   +  G +DP  + G   +VPVT + + QF      +  IS  V    GGC  I       L   S+  L+++   AIG     +G       + +Y     F   G +Y   PS YT
Sbjct:   45 QKQQY----GISSKYSGFGEVAS--VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGSMQGILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRN---GQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVD---SVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQ--AIGATQNQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYT 334          
The following BLAST results are available for this feature:
BLAST of DY271058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PAG2_BOVIN5.200e-3534.78Pregnancy-associated glycoprotein 2 OS=Bos taurus ... [more]
CHYM_CALJA1.513e-3438.95Chymosin OS=Callithrix jacchus GN=CYM PE=1 SV=1[more]
PEPB_CANFA1.976e-3437.37Pepsin B OS=Canis familiaris GN=PGB PE=1 SV=1[more]
PEPA_SORUN1.976e-3435.74Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA_PIG1.976e-3439.79Pepsin A OS=Sus scrofa GN=PGA PE=1 SV=3[more]
PEPA_CHICK1.976e-3438.65Pepsin A OS=Gallus gallus GN=PGA PE=1 SV=1[more]
PEPC_RAT2.581e-3441.40Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1[more]
PEPC_MOUSE2.581e-3440.86Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]
PEP2B_GADMO2.581e-3440.74Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
CHYM_BOVIN7.509e-3432.46Chymosin OS=Bos taurus GN=CYM PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL08FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271058 ID=DY271058; Name=DY271058; organism=Citrus clementina; type=EST; length=1230bp
CAGCTTCAGCAGAAAACCAAAGAACATCATGGAGCAGAAACTTCTTCGGT
CAGTTTTCTGTTTATGGGTGCTAGCGTCGTGCTTGCTTCTTCCTGCTTCC
TCTAATGGCTTACGGAGAATTGGCTTGAAGAAGCGGCGTCTAGATCTTCA
TAGTCTAAATGCTGCAAGAATAACAAGAAAAGAGCGATATATGGGGGGAG
CAGGTGTTAGTGGCGTGCACCATCGTTTGGGTGATTCAGATGAAGATATT
TTGCCTTTGAAGAACTTTATGGATGCTCAATACTTTGGAGAGATTGGTAT
TGGCTCTCCCCCACAAAATTTCAGTGTCATATTTGATACCGGCAGTTCCA
ATCTCTGGGTTCCATCTTCAAAGTGCTATTTCTCTATTTCCTGCTATTTC
CATTCGAGGTACAAGTCCAGAAAATCCAATACATATACCGAAATTGGAAA
ATCCTGTGAAATAAACTATGGATCTGGATCAATTTCTGGCTTCTTCAGTC
AAGACAATGTTGAAGTTGGGGATGTTGTTGTCAAGGATCAGGTTTTCATT
GAGGCTACACGAGAAGGGAGTCTCACTTTTCTATTGGCAAGGTTTGATGG
AATAATAGGGCTTGGGTTCCGGGAAATTGCAGTTGGGGATGCTGTGCCTG
TGTGGGACAATATGGTTGAGCAGGGCCTTGTAAGCGAGGAGGTCTTCTCA
TTCTGGCTCAACAGGGATCCAGACGCTGAAGAGGGTGGAGAGATTGTTTT
TGGTGGTGTTGATCCAAAGCCCTTTAAAGGGAAGCATACCTATGTTCCTG
TTACTAAAAAAGGCTTCTGCCAGTTCAATTTTGGGAAAAATATTAATTGG
GAAATCAGTCCACAGGTGTTTGGGAGGGGGGGGTGTGCCTGCATTTGTGG
ACCTCAGGAACACTCCTTACAACCCCGGTCCAACCCCCGGTTGGACCTGA
AATCCATTCCAGCCATTGGGTGGGGAAGGGAGTTTTTTAGTGGCGGGAGT
GAAAACTATTTTTTTTCCCCATATGGGGGGATTTACTTAAGGAAACCCTC
ATATTATACCGGGGTCTTCTACCCTGAAAAAATTAATGTCTACACAAATA
GGGTTTTTTATGCTCTTTCCAGGGGGTCCCCTAAATTGTTTGGCCTATAA
GGGGGATCAACAGAAACCGGCGGCGTTTTCAACGAGAGCAAAAATCTTTA
TTCCAACCCGCCGGGGCATAATGTTGTGGT
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