DY271067

Overview
NameDY271067
Unique NameDY271067
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length764
Libraries
Library NameType
Fruit-TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.875e-12
Identity = 31/60 (51.67%), Postives = 39/60 (65.00%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            G +L +GV  VGYG ENG  YWI+KN+WG+ WGE GYIR+ R+        CG+   ASY
Sbjct:  265 GDNLHHGVNVVGYGIENGQKYWIIKNTWGADWGESGYIRLIRDT----DHSCGVEKMASY 320          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: PAPA2_CARPA (Chymopapain OS=Carica papaya PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.159e-11
Identity = 31/60 (51.67%), Postives = 42/60 (70.00%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            GT L + VTAVGYGT +G +Y I+KNSWG +WGE GY+R++R  +G   G CG+   + Y
Sbjct:  288 GTKLDHAVTAVGYGTSDGKNYIIIKNSWGPNWGEKGYMRLKRQ-SGNSQGTCGVYKSSYY 346          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSP3_DICDI (Cysteine proteinase 3 OS=Dictyostelium discoideum GN=cprC PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.582e-11
Identity = 34/57 (59.65%), Postives = 38/57 (66.67%), Query Frame = 1
Query:   10 LAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            L +GV AVG GT+NG DY+IVKNSWG SWG  GYI M RN        CGI+  ASY
Sbjct:  282 LDHGVLAVGMGTDNGEDYYIVKNSWGPSWGLNGYIHMARN----KDNNCGISTMASY 334          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: MDO1_PSEMR (Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.373e-11
Identity = 31/56 (55.36%), Postives = 43/56 (76.79%), Query Frame = 1
Query:    1 GTSLAYGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAM 168
            G SL + +T +GYG ++   YWIV+NSWGSSWG+GGY+R+ R+V+ +  G CGIAM
Sbjct:  154 GFSLNHAITIIGYGRDS---YWIVRNSWGSSWGQGGYVRIRRDVSHS-GGVCGIAM 205          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 31/53 (58.49%), Postives = 36/53 (67.92%), Query Frame = 1
Query:   22 VTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            V  VGYG+ +G DYWI KNSWG  WGE GYI ++RN  G L G CG+   ASY
Sbjct:  303 VLLVGYGSADGVDYWIAKNSWGFDWGEDGYIWIQRN-TGNLLGVCGMNYFASY 354          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.753e-11
Identity = 33/56 (58.93%), Postives = 38/56 (67.86%), Query Frame = 1
Query:   16 YGVTAVGYGTE-NGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            + VTAVGYGT+ NG DYWIVKNSWG+ WGE GYI+M RN        C IA  + Y
Sbjct:  269 HAVTAVGYGTDANGGDYWIVKNSWGAWWGESGYIKMARN----RDNNCAIATYSVY 320          
BLAST of DY271067 vs. ExPASy Swiss-Prot
Match: CYSP3_SOLLC (Cysteine proteinase 3 OS=Solanum lycopersicum GN=CYP-3 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11
Identity = 29/55 (52.73%), Postives = 35/55 (63.64%), Query Frame = 1
Query:   16 YGVTAVGYGTENGADYWIVKNSWGSSWGEGGYIRMERNVAGTLTGKCGIAMEASY 180
            + V AVGYG ENG  YW++KNSWG+ WGE GY +ME          CG+A  ASY
Sbjct:  303 HAVLAVGYGVENGTPYWLIKNSWGADWGEDGYFKMEMG-----KNMCGVATCASY 352          
The following BLAST results are available for this feature:
BLAST of DY271067 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
CATLL_PHACE8.875e-1251.67Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
PAPA2_CARPA1.159e-1151.67Chymopapain OS=Carica papaya PE=1 SV=2[more]
CYSP3_DICDI2.582e-1159.65Cysteine proteinase 3 OS=Dictyostelium discoideum ... [more]
MDO1_PSEMR3.373e-1155.36Macrodontain-1 OS=Pseudananas macrodontes PE=1 SV=... [more]
P34_SOYBN5.753e-1158.49P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
CRUST_PANBO5.753e-1158.93Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP3_SOLLC9.813e-1152.73Cysteine proteinase 3 OS=Solanum lycopersicum GN=C... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YL17FM1 Fruit-TF Citrus clementina cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DY271067 ID=DY271067; Name=DY271067; organism=Citrus clementina; type=EST; length=764bp
GGGACATCTCTGGCTTATGGTGTTACTGCTGTTGGATATGGCACAGAAAA
TGGAGCTGATTACTGGATTGTGAAGAATTCATGGGGCAGTAGCTGGGGAG
AGGGTGGCTATATTAGGATGGAGCGTAACGTGGCTGGCACTCTCACGGGC
AAGTGTGGAATTGCCATGGAGGCCTCATATCCCATAAAGAAAGGCCAAAA
TCCTCCCAACCCCGGACCGTCTCCTCCATCTCCAACAAAGCCTCCTGCTG
TGTGTGACAATTATTACTCTTGCCCTGAGAGCAACACTTGCTGCTGTGTC
TTTGAGTATGGTAACTCTTGCTTTGCATGGGGATGCTGCCCGCTTGAGGC
TGCCACCTGCTGTGATGACCACTATAGCTGCTGCCCACATGACTATCCCA
TCTGTAATGTTCGTGCTGGGACCTGCTTGATGAGCAAGGACAACCCATTG
GGAGTGAGGGCATTGCGACGCACCCCTGCTAAACCTTACTGGGCTCATGG
AAATCAAGGTGGAAGTAGCAGTGCTTAATTATAGTTGGCACTGTAAGAGC
AGTGGAAGGCCGAAGGGAGGATGAAGATATTCGTGCTTGTGAATGAGTTT
CTCCCCGGCCTTAGTTCATTTTACTGCATTTCATTTCAAACGTTAATGTA
CCGGCCGGTGGATGGTTCTGTTAAATATTTATTCGGACGTTGGTTTTGTA
TATAGCGTTGTAAGTTATCTATCCGGCGTGAATCCAAACAATGCACCAAC
CAATTTGTTGTTAT
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