DY271079
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP16_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 16 OS=Schizosaccharomyces pombe GN=ubp16 PE=1 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 1.188e-15 Identity = 51/132 (38.64%), Postives = 80/132 (60.61%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFPETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPS-YLVDTESSSSR 389 K++T RAPNILTI KRF F K++K++++PE+ +L PYMSD + + Y+L V+VH S GHY + K G W + DD V++ ++ VL+Q AY+L Y R S S + ++TE++ ++ Sbjct: 318 KQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMSDP-NCSCWYELIGVLVHAGGSTRS--GHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYILQYKRKSTSSSKHKLNTENTVTK 446
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP21_ARATH (Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 1.112e-13 Identity = 65/209 (31.10%), Postives = 96/209 (45.93%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSG--RFGKLNKRVTFPETLDLSPYMSDGGDR--TDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAETEPKEVECSSTMESINPNSRSLSLPCDDFSHLRVSSCKSKSAGAIDPQAVPAHFKDTNVDNIESSS 617 K+L F + P + T LKRF + K+ + FP LDLSP+MS D + Y LYA V H+ + + FGHY YV+ W+ DD KVT + E VLS+ AY+L Y R T SS E+ V E P S +++ + + S C+D + + K + +P+ H +++ N E SS Sbjct: 355 KQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGI--RATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFYAREG--------TPWFSSTFEQLKTV-FEATPLHFSPVSVLDNSYESVDNSSKACNDSVGVSIPDVKWPDSCCQEPKEEVFHSAESS--NNEDSS 550
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP2_ARATH (Ubiquitin carboxyl-terminal hydrolase 2 OS=Arabidopsis thaliana GN=UBP2 PE=1 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 2.477e-13 Identity = 48/127 (37.80%), Postives = 63/127 (49.61%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQS---GRFGKLNKRVTFPETLDLSPYMSD--GGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRG---------HWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K++ +AP +LTI LKRF GR KLN V F E +DL YM G+ VY+L +V H + GHY+ YV+ + WY V D V V LE+VL AY+L Y R+ Sbjct: 834 KKVLINKAPPVLTIHLKRFSQDLRGRLSKLNGHVAFKEVIDLRQYMDSRCSGEDPPVYRLAGLVEHSGTMRG---GHYVAYVRGGQRVKETDSSSTAWYNVSDAYVRQVSLEKVLHSEAYILFYERI 957
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP20_ARATH (Ubiquitin carboxyl-terminal hydrolase 20 OS=Arabidopsis thaliana GN=UBP20 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 4.225e-13 Identity = 60/175 (34.29%), Postives = 81/175 (46.29%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFPETLDLSPYMSD--GGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRVSARPSYLVDTESSSSRKEEPSAVNAETEPKEVECSST-----MESINPNSRSLSLPCD 500 K+L + P + T LKRF++ K+ K V P +DL PYM + + + Y LYA+V H A +GHY YV+ W+ DD KVT +D + VLSQ +Y+L Y R R + E S +N + PK V SST E N S PCD Sbjct: 362 KQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTKYHLYALVEHFGYSVA--YGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFYAREGTR--WFSSVYEEMQPLVEASLLN--SSPKSVLDSSTNGECLSEISYENGDKASKPCD 530
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP1_ARATH (Ubiquitin carboxyl-terminal hydrolase 1 OS=Arabidopsis thaliana GN=UBP1 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 2.738e-12 Identity = 50/133 (37.59%), Postives = 64/133 (48.12%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQS---GRFGKLNKRVTFPETLDLSPYMSDGGDRTD--VYKLYAVVVHVDMLNASFFGHYICYVKDFRGH---------------WYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K++ +AP +LTI LKRF GR KL+ V F E +DLS YM D VY+L +V H L A GHY+ Y++ GH WY D +V LEEVL AY+L Y R+ Sbjct: 956 KKVLINKAPPVLTIHLKRFSQDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDEPVYRLAGLVEH---LGAMSRGHYVSYIRG--GHKERRDSDTKEPNSSIWYHASDSQVRPASLEEVLRSEAYILFYERI 1083
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP9_ARATH (Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana GN=UBP9 PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 3.577e-12 Identity = 46/117 (39.32%), Postives = 64/117 (54.70%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFP-ETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGH-WYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K+L + P+IL LKRF R+ K++ V FP LDLS Y+ + D++ +Y+LYAV H L GHY Y K + WY DD V+SV+ E+ + AY+L Y RV Sbjct: 781 KKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGLGG---GHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRV 894
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP8_ARATH (Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana GN=UBP8 PE=1 SV=2) HSP 1 Score: 72.4034 bits (176), Expect = 6.101e-12 Identity = 47/117 (40.17%), Postives = 58/117 (49.57%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFP-ETLDLSPYMS-DGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K+L R P IL I LKRF RF KL V FP + LDLS Y+S G T Y LYA+ H + GHY YV WY DD V + E++ + AY+L Y R+ Sbjct: 756 KKLDLWRLPEILVIHLKRFSYSRFMKNKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSMGG---GHYTAYVHHGGDRWYDFDDSHVHQISQEKIKTSAAYVLFYKRL 869
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP10_ARATH (Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana GN=UBP10 PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 2.318e-11 Identity = 45/117 (38.46%), Postives = 63/117 (53.85%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRF--GKLNKRVTFP-ETLDLSPYMSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKDFRGH-WYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K+L + P+IL LKRF R+ K++ V FP LDLS Y+ + ++ +Y+LYAV H L GHY Y K + WY DD V+SV+ E+ + AY+L Y RV Sbjct: 782 KKLDLWKLPDILVFHLKRFTYSRYLKNKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGLGG---GHYTAYAKLIDDNKWYHFDDSHVSSVNESEIRNSAAYVLFYRRV 895
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP16_RAT (Ubiquitin carboxyl-terminal hydrolase 16 OS=Rattus norvegicus GN=Usp16 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 3.954e-11 Identity = 45/146 (30.82%), Postives = 69/146 (47.26%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPY-------MSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKD------------------------FRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K++ AP +LT+ LKRFQ F K+NK + FPE LDL+P+ +++ R +Y LY VV H + + GHY Y K+ +G W+ + D V +V + +VL+ AY+L Y R+ Sbjct: 684 KQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEESTRV-LYSLYGVVEHSGTMRS---GHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYERI 825
BLAST of DY271079 vs. ExPASy Swiss-Prot
Match: UBP16_MOUSE (Ubiquitin carboxyl-terminal hydrolase 16 OS=Mus musculus GN=Usp16 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 3.954e-11 Identity = 45/146 (30.82%), Postives = 69/146 (47.26%), Query Frame = 3 Query: 3 KRLTFRRAPNILTIALKRFQSGRFG--KLNKRVTFPETLDLSPY-------MSDGGDRTDVYKLYAVVVHVDMLNASFFGHYICYVKD------------------------FRGHWYRVDDCKVTSVDLEEVLSQGAYMLLYNRV 341 K++ AP +LT+ LKRFQ F K+NK + FPE LDL+P+ +++ R +Y LY VV H + + GHY Y K+ +G W+ + D V +V + +VL+ AY+L Y R+ Sbjct: 683 KQMLVSLAPPVLTLHLKRFQQAGFNLRKVNKHIKFPEILDLAPFCTLKCKNVAEESTRV-LYSLYGVVEHSGTMRS---GHYTAYAKERTASCHLSNLVLHGDIPQDCEMESTKGQWFHISDTHVQAVPITKVLNSQAYLLFYERI 824 The following BLAST results are available for this feature:
BLAST of DY271079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DY271079 ID=DY271079; Name=DY271079; organism=Citrus clementina; type=EST; length=1218bpback to top |